mRNA_P-littoralis_Contig171.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 201 bits (511), Expect = 4.710e-61 Identity = 105/126 (83.33%), Postives = 115/126 (91.27%), Query Frame = 1
Query: 4 ILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPVPAATGPATVVNPYAPSK 381
ILEHRF +RAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSG+DF SDYR++IMLAV++AE AENVRARSRNS AVLCPRYI+VEPL+A PVVEAPVPAA G +T+VNPYA SK
Sbjct: 239 ILEHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYISVEPLAAAPVVEAPVPAAQGSSTIVNPYASSK 364
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 193 bits (491), Expect = 2.530e-54 Identity = 101/120 (84.17%), Postives = 109/120 (90.83%), Query Frame = 1
Query: 22 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPVPAATGPATVVNPYAPSK 381
AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYR +IMLAV++A AENVR+RSRNS AVLCPRYI+VEPL+A PVVE VPAA G +T+VNPYA SK
Sbjct: 917 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVRSRSRNSPNAVLCPRYISVEPLAATPVVETSVPAAQGSSTIVNPYASSK 1036
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 113 bits (282), Expect = 7.490e-29 Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 1
Query: 1 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITV 291
D +EHRF H R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G+DF S R +I+L V++ E + +RA SRN + AV+ PRY++V
Sbjct: 67 DPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSV 163
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.050e-28 Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 1 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVE 321
D++EH F H+R GLG+ RNPTAAQAKER RGD+ RGLHG RAN+NRNAR G DF S YRA++ML V E E + +RAR+++S AVL P YI+V A PV +
Sbjct: 660 DVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISVAAPGATPVAD 766
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 102 bits (254), Expect = 4.000e-25 Identity = 63/122 (51.64%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 28 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEA-----PVPAATGPATVV-NPYAP 375
+R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G DF S R +I+L V++ E + +RA SRN + AV+ RY++V A P VE PA+ G VV N YAP
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFSRYLSVVKPRADPTVEGGASQESTPASAGQTPVVFNSYAP 122
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 107 bits (268), Expect = 2.760e-24 Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 1 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVV 318
DI EHR+ H+ GLG+ NPT A+AKER+ RGDL R LHG SRA N+NAR G+DF S R +I+L V++AE + +RA S+N + AV+ PRYI+++ A PVV
Sbjct: 530 DIEEHRYGHMHQGLGSHSNPTCAEAKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMRAPSKNPASAVMFPRYISIDKPHADPVV 635
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 5.670e-23 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 28 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVE 294
+R LG+ NP AAQAKER+ RGDL R LHG SRAN N+NAR G+DF S R +IML V++AE + +RA SRN AV+ PRYI+++
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMRAPSRNPVSAVMFPRYISID 89
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 3.250e-20 Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRN--ARSGDDFNVSDYRAK--IMLAVSEAETAENVRARSRNSSVAVLCPRYITV 291
DI EHRF+HIRA LGT RNPTA +AK+RS GDL R +G R N +RN ARSG DF K I+LAV++ ET + VRA RN+ VLCPRY+ +
Sbjct: 180 DICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPRYMDI 280
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5KZP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP5_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 3.930e-16 Identity = 50/99 (50.51%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 97 DLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPV-----PAATGPATVV-NPYAP 375
DLNRGLHGGSRAN NR +R G+DF S R +I+L V++ E + +RA SRN + AV+ PRY++V A P VE PA+ G VV NPYAP
Sbjct: 89 DLNRGLHGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKPRADPTVEGSASQESTPASAGQIPVVFNPYAP 187
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 4.350e-11 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 1 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIML 201
DI+EHR+ H+ LG+ NPTAAQAKER+ + DL R LHG SRAN AR G+DF S R +IML
Sbjct: 145 DIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIML 208 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig171.19.1 >prot_P-littoralis_Contig171.19.1 ID=prot_P-littoralis_Contig171.19.1|Name=mRNA_P-littoralis_Contig171.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=128bp DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNAback to top mRNA from alignment at P-littoralis_Contig171:83633..84094- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig171.19.1 ID=mRNA_P-littoralis_Contig171.19.1|Name=mRNA_P-littoralis_Contig171.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=462bp|location=Sequence derived from alignment at P-littoralis_Contig171:83633..84094- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig171:83633..84094- >mRNA_P-littoralis_Contig171.19.1 ID=mRNA_P-littoralis_Contig171.19.1|Name=mRNA_P-littoralis_Contig171.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=384bp|location=Sequence derived from alignment at P-littoralis_Contig171:83633..84094- (Pylaiella littoralis U1_48)back to top |