mRNA_P-littoralis_Contig170.119.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: A0A6H5JY02_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY02_9PHAE) HSP 1 Score: 741 bits (1914), Expect = 2.360e-261 Identity = 374/557 (67.15%), Postives = 432/557 (77.56%), Query Frame = 3
Query: 141 LMRHQCVGLLV-GVGLAGGFQIQAPSTRQTSLMMSATKGSAA---GAMPDAVANLGKG-EELFDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQSDAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNRKNA-GPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGISFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYDSSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTATT--SPSASVLNAVTMRAMLPGVALTLASLGTVKALEKLHGMFFTSSFSHQDN 1787
+M +C LL G+ +A GF + A S ++ SA +G +A + P VA G E+LFDWNKQWYPVLS++D DPGRAH VQLLGK+LVVWRNKE RW+CFDDRCPHRAAPLT+GR+EDDGSLL AYH WRFDADGKCL IPQSD GG+DEAQPKACAKV Q MVWVWGENGPDA LESALTPAQLIP+L+D+E ++SGRV+ + VGQNDLAYGWDT MENVVDPSHV VSHHGVAG+R PI L+P+ RWPVPTKDGFEF D +V ++F+PP + +NEAKDS+G L L LY PTRPGW RLLGR +V+ + P SK AK + +DK+ GV KS+L + +PSW+QHVTG LFLHQDLVFLHHQEKILASAGYDSS YG+AVFVPAAADR V+ALR+WITK GSGGPAWDK CD TLPPRE N E LFNVY+ HTK+C SCQGALKNVKK T AKTAAV+SF WA+LRGARA+GTA SPSA V+N VT RAMLP VALT AS+G +K LEKL GMF+T SF HQD+
Sbjct: 32 IMVGRCARLLAAGLSVASGFHLPASSGAPRRVVPSAARGLSAVDSDSSPGVVAASPAGKEDLFDWNKQWYPVLSLKDTDPGRAHPVQLLGKELVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKV-----AQGMVWVWGENGPDAGLESALTPAQLIPDLDDKEGIESGRVMLARVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVSSDSTVTFQPP--CLVINEAKDSAGKLLLILYGIPTRPGWVRLLGRSAYVHTFAPNSKKAKEQAKEDKRNGVKKSRLQATANVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGYDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREDLFNVYENHTKSCTSCQGALKNVKKMLTTAKTAAVISFTWAVLRGARAVGTAAAAGSPSARVINTVTARAMLPAVALTFASVGAIKILEKLRGMFYTYSFHHQDS 581
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: A0A6H5KEF5_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEF5_9PHAE) HSP 1 Score: 654 bits (1688), Expect = 2.240e-227 Identity = 337/568 (59.33%), Postives = 394/568 (69.37%), Query Frame = 3
Query: 141 LMRHQCVGLLVGVGLAG--GFQIQAPSTRQTSLMMSATK-----------GSAAGAMPDAVANLGKGEELFDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQSDAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNR-KNAGPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGISFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYD---SSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGT--ATTSPSASVLNAVTMRAMLPGVALTLASLGTVKALEKLHGMFFTSSFSHQDN 1787
++ ++ +GLL L F I PS+ + +L +AT G + A+P A G E+FDWNKQWYP+L+ DPGRAH VQLLGK+LVVWRNKE RW+CFDDRCPHRAAPLT+GR+EDDGSLL AYH WRFDADGKCL IPQSD GG+DEA PKACAKVYPTQV Q ++WVW ENGPDA LESALTP LIPEL+DEE L SGRV+P V DLAYGWDT++EN VDP+HVP +HHGVAG+R K+ PI LEP E WPV GF F D I+F PP + L E D+SG LKL LY PT+PGW RL+GRQ +V++Y PKSK AK +K+ G S L + P W+ H T LFL+QD+VFLHHQEK LAS GYD SS+YGRAV+ PA ADR VMA+RKWI GSGGPAWDK CDPTLP RE N E LF+ Y+ HTK C++C ALKNV + A+KTA VV F W LLRGARA+ T A S SA V+NAVT RAMLP VAL LASLG VKALEK +++T SF HQDN
Sbjct: 1 MLFYKVLGLLTWQSLTACSAFHIHLPSSPRDTLFSTATPTQLSMSTITPPGPSTAALPVFTARTG---EVFDWNKQWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEANPKACAKVYPTQVAQGIIWVWAENGPDAGLESALTPPHLIPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENFVDPAHVPSAHHGVAGDRYKDVRPIDLEPDEEWPVTATSGFRFKFDDEVAGTHNKITFVPP--CLVLVENADNSGTLKLMLYGIPTKPGWSRLVGRQAYVHKYAPKSKEAKALHKKNKRLGKKTSGLLVAARITSKFPQWLIHATSGLFLYQDMVFLHHQEKTLASVGYDGTRSSSYGRAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREQNREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVFFTWGLLRGARAVSTPAAVGSRSAGVINAVTARAMLPAVALMLASLGAVKALEKFRSLYYTYSFHHQDN 563
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: D8LGA1_ECTSI (Rieske (2Fe-2S) region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA1_ECTSI) HSP 1 Score: 620 bits (1599), Expect = 2.900e-215 Identity = 305/493 (61.87%), Postives = 360/493 (73.02%), Query Frame = 3
Query: 327 QWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQSDAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNR-KNAGPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGISFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYD---SSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTATT--SPSASVLNAVTMRAMLPGVALTLASLGTVKALEKLHGMFFTSSFSHQDN 1787
QWYPVL V+ DPGRAH VQLLGK+LVVWRNKE RW+CFDDRCPHRAAPLT+GR+EDDGSLL AYH WRFDADGKCL IPQSD GG+DEAQPKACAKVYPTQV QD++WVW ENGPDA LESALTP L+PEL+DEE L SGRV+P V DLAYGWDT++EN+VDPSHVP +HHGVAG+R K+ PI LEP + WPV A L E D +G LK+ LY PT+PGWCRL+GRQ +V++Y PKSK AK ++K+ G S+L S + +P W+ H + +FL+QD+V LHHQ+K LAS G+D +S+YG+AV+ PA ADR VMA+RKWI GSGGPAWDK CDPTLP REH E LF+ Y+ HTK C++C ALKN+ K A+KTA VS W LLRGARA+ T T S SASV+NAVT RA+LP VALTLASLG VK LEKL G+++T SF HQDN
Sbjct: 10 QWYPVLGVKHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKVYPTQVAQDIIWVWAENGPDAGLESALTPPHLLPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENLVDPSHVPCAHHGVAGDRYKDVRPIDLEPDKEWPV---------------------------TATVLVENADDAGELKMTLYGVPTKPGWCRLVGRQAYVHKYAPKSKEAKALRKENKRLGKKPSELMVAASIMSKIPQWLMHASAGIFLYQDMVLLHHQDKTLASVGHDGNSTSSYGKAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNINKLLAASKTATAVSCTWGLLRGARAVSTPTAVGSRSASVVNAVTARAILPAVALTLASLGAVKVLEKLRGLYYTYSFHHQDN 475
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: A0A6H5KG92_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG92_9PHAE) HSP 1 Score: 518 bits (1334), Expect = 7.030e-174 Identity = 277/569 (48.68%), Postives = 357/569 (62.74%), Query Frame = 3
Query: 144 MRH----QCVGLLVG-VGLAGGFQ-IQAP-------STRQTSLMMSATKGSAAGAMPDAVANLGKGEELFDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQSDAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNRKNAGPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGISFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAA-KGKTNDDKKAGVLKSKLTG---PVSFAAA---MPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYDSSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTAT-TSPSASVLNAVTMRAMLPGVALTLASLGTVKALEKLHGMFFTSSFSHQDN 1787
MRH + V LL+G + LA GF ++ P ST TS +SA K S+ A + EE FDW+KQWYPVLS +D+DPG+AH VQLLGKDLVVWRN E RW+ FDDRCPHRAAPL++GR+E DGSLL AYH WRFD DGKCL IPQSD GG+DE P+ACAK+YPTQV QDMVWVWG+NGPDA L+S LT L+ L D++ +KSGRV+P V Q DLAY W+T ENV+DP+HV VSHHG+ G R A P+ LE A P TK+GF P +G++ P + + + + L Y PTRPGW R+ RQ + P+ KG N DKK +L PV A +W+QH+ H+F+HQD+ L+HQEKI+AS+G+ + + ++ P +D+G+ LRKWI KFGSGGP W KG D +LP R N + ++++Y+ HTK+C +C GALK V++ TAAK + V S WA+LR A A+ T+ SP N V +AMLPGV L LASL T K L L MF+ + HQ++
Sbjct: 1 MRHPAPRRTVVLLIGAISLAEGFSLVRLPPTACGKTSTSSTS-NLSAVKTSSETAPAVSSRESKANEESFDWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDGSLLCAYHAWRFDTDGKCLSIPQSDRGGKDETNPRACAKLYPTQVAQDMVWVWGKNGPDAVLDSVLTKPALVSALEDKKGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSMAKPLDLE-ATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELEDGKTISLVQYNIPTRPGWSRMFNRQLTI---TPEVVGENKGDDNKDKKRAPSLLQLVARISPVKLKLAPNEQRAWIQHIFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTACLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPGTPPSNFVAAKAMLPGVLLMLASLKTTKMLGSLRRMFYVYKYVHQEH 564
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: A0A856MM91_9CYAN ((2Fe-2S)-binding protein n=1 Tax=Brasilonema sennae CENA114 TaxID=415709 RepID=A0A856MM91_9CYAN) HSP 1 Score: 376 bits (965), Expect = 3.050e-119 Identity = 218/524 (41.60%), Postives = 292/524 (55.73%), Query Frame = 3
Query: 255 SAAGAMPDAVANLGKGEEL-FDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQS---DAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNR-KNAGPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGI-SFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYDSSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTATTSPSASVLNAVTMRAMLPGVALTLASLGTVK------ALEKLHGMFFTSSFSHQDNN 1790
S AGA P +A L +GEEL F W KQWYPV V DP R H +QLLGKD+V+WR+ +W CF+D CPHR APL++GR+E DG+LL AYH WRFD++G C+ IPQS + + PK+CA +PTQ Q ++WVW E+GP A ES L +L+PEL + + RV+ DL YGWD MENV DP+HVPVSHHG+ GNR K+A + + + T++GF F A + + F+PP Q ++ KD G L L LYATPTRPGWCR +G Q V +AG L L F MP+W+ HV +FLHQD VFLH+Q KI+A G + V+ P D+ +A R W++ GG WD GC+P LP + + E LF+V+ HT+NC+ CQ ALKN+ + + A AAVV ++ ARA+ S A ++ ++P LA GT+ L+K +F+ F H DNN
Sbjct: 24 STAGAKP--IAELKQGEELTFQWTKQWYPVAVVEFLDPSRPHAMQLLGKDIVLWRDGSGKWRCFEDFCPHRLAPLSEGRVEADGTLLCAYHAWRFDSEGNCVSIPQSLDKQTEAKHCSNPKSCAVAFPTQECQGLLWVWSESGPQAQSESQLRTPRLVPELESD----ADRVVHLFWNIRDLPYGWDFFMENVADPAHVPVSHHGIVGNRYKDAKYYDMIRVRQ--MSTQEGFSFEITPVAPNLKQAVHDFQPPSQMKIVSTFKDG-GQLILALYATPTRPGWCRHIGCQVLVKN----------------EAGKLPKGLG---FFGLPMPTWLGHVLASVFLHQDSVFLHYQHKIIAQRG--KGKWLETVYTPNPQDKMTIAFRHWLSNRAGGGIPWDSGCNPHLPLEKLDKEKLFDVWTTHTQNCSYCQNALKNINRLTMLAYIAAVVCLCIGVIVDARAVAIRVALTSGGQ-TATSLFTVVPPTGFWLALGGTILFATVGYLLKKFSRLFYIYKFEHADNN 516
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: A0A8J6SPF2_9CYAN (Rieske 2Fe-2S domain-containing protein n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SPF2_9CYAN) HSP 1 Score: 374 bits (960), Expect = 1.030e-118 Identity = 222/526 (42.21%), Postives = 298/526 (56.65%), Query Frame = 3
Query: 246 TKGSAAGAMPDAVANLGKGE-ELFDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQS---DAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNRKNAGPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGI-SFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYDSSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTATTSP-----SASVLNAVTMRA--MLPGVALTLASLGTVKALEKLHGMFFTSSFSHQDN 1787
T+ S G + DAV + E ELF W KQWYPV V DP R H +QLLGKD+V+WR+ +W CF+D CPHR APL++GR+E DG+LL AYH WRFD++G C+ IPQS + + K+CA VYPTQ Q ++WVW E+G +A +ES ++IPEL ++ S RV+ DL YGWD MENV DP+HVPVSHHG+ G+R P R + T++GF F A + + F+PP ++ KD G L L LYA+PTRPGWCR +G Q FV K++A K K GV F MP W+ HV G LFLHQD VFLH+QEKILA G D + AV+ P + D+ V+A R+W++K GG WD GC+ LP + + + LF+V+ HT++C CQ ALKN+ + S A AAVV F ++ ARA+ + + SVL V + G A+ A +G + L+K +F+ F H N
Sbjct: 3 TQTSLQGDIGDAVEQSNEEEKELFQWTKQWYPVAVVDFLDPSRPHAIQLLGKDIVLWRDGSGQWRCFEDFCPHRLAPLSEGRVESDGTLLCAYHAWRFDSEGNCVSIPQSIDKQTEAKHCSNKKSCAVVYPTQERQGLLWVWAESGQEAQVESQSRAPRIIPELEED----SDRVVQLFWNVRDLPYGWDFFMENVADPAHVPVSHHGIVGSRYKDAKYYDMPRIR-EMSTQEGFSFAITPTAPTIEQVVHDFQPPCHMRIVSTFKDG-GKLILALYASPTRPGWCRHIGGQVFV-----KNEAGKR----PKGLGV----------FGLPMPIWLGHVLGSLFLHQDAVFLHYQEKILAKRGKDR--WLDAVYTPNSQDKMVIAFRQWLSKRAGGGIPWDSGCNSELPSAQRDKQKLFDVWATHTQHCQVCQDALKNINRLSVLAYVAAVVCFGLGVMVDARAVAMKVAAAPIEQTATSVLTVVPPTGFWLALGSAILFAIVGYL--LKKFSRLFYVYEFEHAHN 499
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: A0A563VJP5_9CYAN (Ring-hydroxylating dioxygenase, large terminal subunit n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563VJP5_9CYAN) HSP 1 Score: 369 bits (948), Expect = 5.760e-117 Identity = 206/509 (40.47%), Postives = 279/509 (54.81%), Query Frame = 3
Query: 291 LGKGEELFDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQS---DAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNRKNAGPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGIS-FRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYDSSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTATTSPSASVLNAVTMRAMLPGVALTLASLGTV------KALEKLHGMFFTSSFSHQDN 1787
L + E F W KQWYPV D R H +QLLGKDLV+W++ +W CF+D CPHR APL++GR+E DG+LL AYH WRFD DG C+ IPQS + R+ A K+CA VYPTQ +Q ++WVW E+G +A +ES L P + +PEL++++ +++ + DL YGWD MENV DP+HV VSHHG+ G+R P R + T++GF FG A + + F+PP KD G L L LYA PTRPGWCR +GRQ + K+ GKT G FA MP W+ H+ LFLHQDLVFLHHQEKI+A G + V+ P D+ V+A R+W+ K GG WD C+ L E E LF+V+ HT++C CQ ALKN+ + + + A+ AL R + + A+V ++ LP + LA +G + L+KL +F+ FSH DN
Sbjct: 19 LKEAESTFQWTKQWYPVAVAEFLDSSRPHSIQLLGKDLVLWQDNSGQWHCFEDSCPHRLAPLSEGRIESDGTLLCAYHAWRFDGDGNCVSIPQSQDKETESRNCANEKSCAVVYPTQELQGLIWVWAESGAEAQVESQLRPPRTVPELDNQDK----KIIKAFWNVRDLPYGWDFFMENVADPAHVSVSHHGIMGSRYEDAKYYDMPRLR-EISTQEGFAFGVTPTASNIEQAFNDFQPPCHMRIATNYKDG-GKLILVLYAIPTRPGWCRHIGRQILI-------KSDAGKTPP------------GLGFFALPMPKWLGHILASLFLHQDLVFLHHQEKIVAKRG--QGKWLEKVYTPNPQDKAVIAFRQWLAKRAGGGVPWDADCNHQLLNTELEKEKLFDVWTTHTQHCQVCQDALKNINRLTVLSYLGAIACLFLALFLDGRYVAMQAVTEPANV----SIWHTLPPLGFGLAIIGAIILATAGYLLKKLSRLFYVYKFSHADN 496
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: UPI001EDD5EE1 (Rieske 2Fe-2S domain-containing protein n=1 Tax=Nostoc sp. UHCC 0870 TaxID=2914041 RepID=UPI001EDD5EE1) HSP 1 Score: 366 bits (939), Expect = 1.150e-115 Identity = 210/517 (40.62%), Postives = 282/517 (54.55%), Query Frame = 3
Query: 270 MPDAVANLGKGEEL------FDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQS---DAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNR-KNAGPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGI-SFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYDSSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTATTSPSASVLNAVTMRAMLPGVALTLASLGTVKALEKLHGMFFTSSFSHQDN 1787
+P + N K E+L F W KQWYP+ V DP R H +QLLGKD+V+WR+ +W CF+D CPHR APL+QGR+E DG+LL AYH WRFDA+GKC+ IPQS ++ PK+CA VYPTQ Q ++WVWGE G +A ES L +L+PEL + S +V+ DL YGWD MENV DP+HVPVSHHG+ G+R K+A + P + + T+DGF F + I F+PP + KD G L LYATPTRPGWCR +G Q FV K ++GKT G F +P+W+ HV LFLHQD+VFLH+QEK +A + AVF P D+ V+ R+W+ + GG W +G LP E +H+ LF+V+ HT+NC CQ AL N+ + +A A V F ++ AR + T + T + G + LA +G + L+K +F+ F H N
Sbjct: 7 LPGNILNSLKNEQLQAEEGIFQWTKQWYPIAVVEFLDPSRPHAMQLLGKDIVLWRDGTGKWRCFEDFCPHRLAPLSQGRVESDGTLLCAYHAWRFDAEGKCVNIPQSVDKQTAAKNCENPKSCAVVYPTQENQGLLWVWGETGEEAQKESQLRTPRLVPELEEN----SEQVVKFFWNFRDLPYGWDYFMENVADPAHVPVSHHGIVGDRYKDAKYYDMIPTRK--ISTQDGFAFEIQPTTGNIEQAIHDFQPPCHMRISSTPKDG-GKFILALYATPTRPGWCRHIGCQVFV-------KNSQGKTPQ------------GLSIFGLPLPTWLGHVLASLFLHQDMVFLHYQEKTIAQR--KQGKWLDAVFTPNPQDKMVITFRQWLDQRAGGGIPWAEGYSHDLPWTETDHQKLFDVWTTHTQNCTVCQNALANINRLKVSAYVLAAVCFLLGIILDARMVATQAALEKSLTFLPPTQFWLALGSGILLAIIGYL--LQKFSRLFYVYEFQHFRN 493
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: A0A1J1LET3_9CYAN (Rieske (2Fe-2S) region n=3 Tax=Planktothrix TaxID=54304 RepID=A0A1J1LET3_9CYAN) HSP 1 Score: 365 bits (936), Expect = 2.280e-115 Identity = 205/499 (41.08%), Postives = 274/499 (54.91%), Query Frame = 3
Query: 306 ELFDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQS---DAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNR-KNAGPIPLEPAERWPVPTKDGFEFGCYDPAVKFTRGI-SFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYDSSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTATTSPSASVLNAVTMRAMLPGVALTLASLGTVKALEKLHGMFFTSSFSHQDN 1787
E F W KQWYPV +V DP R H VQLLGKD+V+WR+ +W CF D CPHR PL++GR+E DG+LL AYH WRFD +G C+ IPQS + + + PK+CA VYPTQ Q ++WVWGE+G +A ES L +LIPEL + S +++ D+ YGWD MEN+ DP+HVPVSHHG+ GNR K+A + + + T++GF F + F+PP + G + L LYATPTRPGWCR GRQ + K+ +GKT G FA MP W+ HV LF+HQDLVFLH+QEKILA + + VF P D+ V+ R+WI K GG W + CDP LP E N + LF+V+ HT++C CQ ALKN+ + + + A+V F ++ AR +G T P +L G A+ A+ G L+K +F+ F H N
Sbjct: 21 EQFQWTKQWYPVAAVEFIDPTRPHPVQLLGKDVVLWRDASGQWRCFADACPHRLVPLSEGRVESDGTLLCAYHAWRFDGEGNCVSIPQSQDSETEAKHCSNPKSCAVVYPTQERQGLLWVWGESGSEAQQESLLKSPRLIPELEEN----SDQIVKLPWSFRDIPYGWDFFMENISDPAHVPVSHHGIIGNRYKDAKYYDMISLRK--ISTQEGFAFKIIPTQPHVVEAVHDFQPPCHQ-KIYATNVDGGKMILALYATPTRPGWCRTFGRQILI-------KSKQGKTPG------------GIGFFALPMPIWLNHVLAPLFMHQDLVFLHYQEKILAKR--KNKRWLEEVFTPNPQDKMVITFRQWIEKRAGGGIPWSEECDPHLPLPELNKQQLFDVWSTHTQHCQVCQNALKNINRLTVFSYIMAIVCFGLGVMVDARTVGQLTAFPPIGFW-------VLLGCAIAFATAGYY--LKKFSRLFYIYEFEHTHN 482
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Match: A0A218QH02_9CYAN (Rieske (2Fe-2S) region n=1 Tax=Tolypothrix sp. NIES-4075 TaxID=2005459 RepID=A0A218QH02_9CYAN) HSP 1 Score: 364 bits (934), Expect = 6.580e-115 Identity = 199/462 (43.07%), Postives = 263/462 (56.93%), Query Frame = 3
Query: 276 DAVAN-LGKGEELFDWNKQWYPVLSVRDADPGRAHEVQLLGKDLVVWRNKEERWTCFDDRCPHRAAPLTQGRLEDDGSLLYAYHGWRFDADGKCLRIPQS---DAGGRDEAQPKACAKVYPTQVVQDMVWVWGENGPDAALESALTPAQLIPELNDEEALKSGRVLPSNVGQNDLAYGWDTLMENVVDPSHVPVSHHGVAGNRKNAGPIPLEPAERWPVPTKDGF--EFGCYDPAVKFTRGISFRPPKQAIPLNEAKDSSGVLKLFLYATPTRPGWCRLLGRQTFVYRYDPKSKAAKGKTNDDKKAGVLKSKLTGPVSFAAAMPSWVQHVTGHLFLHQDLVFLHHQEKILASAGYDSSTYGRAVFVPAAADRGVMALRKWITKFGSGGPAWDKGCDPTLPPREHNHEALFNVYQAHTKNCASCQGALKNVKKASTAAKTAAVVSFAWALLRGARALGTATTS 1643
D AN L EE F W KQWY + V DP R H +QLLGK++V+W++ +W CF+D CPHR APL++GR+E DG+LL AYH WRFD+ G C+ IPQS + + + PK+CA YPTQ Q ++WVW E+G A +ES L ++IPEL + S RV+ DL YGWD MENV DP+HVPVSHHG+ GNR + + + T++GF E +P +K + F+PP ++ KD G L L LYATPTRPGWCR +G Q V K+ G FA MP+W+ HV G LFLHQD VFLHHQEKI+A + AV+ P D+ +A R+W+ K GG WD CDP LPP E + + LF+V+ HT++C+ CQ AL N+ + S A AAVV F ++ AR + +A S
Sbjct: 18 DTFANELQAEEETFQWTKQWYALAVVEFLDPSRPHAMQLLGKNIVLWQDGSGKWRCFEDFCPHRLAPLSEGRVESDGTLLCAYHAWRFDSQGNCVSIPQSKDKETEAKHCSNPKSCAVAYPTQECQGLLWVWSESGSQAQVESQLKTPRIIPELENN----SKRVMHLFWNVRDLPYGWDFFMENVSDPAHVPVSHHGIMGNRYQDAKY-YDMIKVRQMSTQEGFAYEMTPVEPDIK-QKVYDFQPPSHMRIVSTYKDG-GKLILALYATPTRPGWCRHIGCQVLVKNEALKTPKGLG-------------------FFALPMPTWLGHVLGSLFLHQDAVFLHHQEKIIAQRR--QGKWVNAVYTPNPQDKMTIAFRQWLEKRAGGGIPWDSSCDPNLPPAERDKQKLFDVWTTHTQDCSVCQNALTNINRLSILAYIAAVVCFGLGVIVDARTVASAVQS 451 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig170.119.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig170.119.6 >prot_P-littoralis_Contig170.119.6 ID=prot_P-littoralis_Contig170.119.6|Name=mRNA_P-littoralis_Contig170.119.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=550bp MRHQCVGLLVGVGLAGGFQIQAPSTRQTSLMMSATKGSAAGAMPDAVANLback to top mRNA from alignment at P-littoralis_Contig170:438178..459595- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig170.119.6 ID=mRNA_P-littoralis_Contig170.119.6|Name=mRNA_P-littoralis_Contig170.119.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=21418bp|location=Sequence derived from alignment at P-littoralis_Contig170:438178..459595- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig170:438178..459595- >mRNA_P-littoralis_Contig170.119.6 ID=mRNA_P-littoralis_Contig170.119.6|Name=mRNA_P-littoralis_Contig170.119.6|organism=Pylaiella littoralis U1_48|type=CDS|length=1650bp|location=Sequence derived from alignment at P-littoralis_Contig170:438178..459595- (Pylaiella littoralis U1_48)back to top |