prot_P-littoralis_Contig170.67.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig170.67.2
Unique Nameprot_P-littoralis_Contig170.67.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length174
Homology
BLAST of mRNA_P-littoralis_Contig170.67.2 vs. uniprot
Match: A0A6H5JB99_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB99_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 8.950e-53
Identity = 123/199 (61.81%), Postives = 130/199 (65.33%), Query Frame = 0
Query:    1 MLRDAKEAFREG-HCANRGAAVLPLRAASTMEGAVDAKGR--------------GADTERGGPSPAXXXXXXXXXXXSLSGGGKVGR-------ALGLKEFMHRTRVLDLYRSILKRARAIEDKDVATEARRQFKSSRDETDPLKVQMLVADATNHLEAMQGSTRGAGSTS----GSWLDIQDPEDKRGRMGEGFPWQR 173
            MLRD+ EAFREG H  N    V P R+ASTM+    A G               G    R   S  XXXXXXXXXXX    G            ALGLKEFMHR RVL+LYR ILKRARA+EDKDVA EARRQFKS   ETDPLKVQM+VADATNHLEAMQGSTRGAGS       SWLDI DPEDKRGR+GEGFPWQR
Sbjct:   16 MLRDSTEAFREGSHTKNARPRVAPFRSASTMQQCAAACGTESTAAVWSCVDPWTGRPRPRSSSSXXXXXXXXXXXXXXXXXGSXXXXXXXXXXXALGLKEFMHRARVLELYRGILKRARALEDKDVADEARRQFKSCLGETDPLKVQMMVADATNHLEAMQGSTRGAGSGGRGGGDSWLDIHDPEDKRGRVGEGFPWQR 214          
BLAST of mRNA_P-littoralis_Contig170.67.2 vs. uniprot
Match: D8LRC8_ECTSI (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC8_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 8.840e-45
Identity = 78/98 (79.59%), Postives = 85/98 (86.73%), Query Frame = 0
Query:   80 MHRTRVLDLYRSILKRARAIEDKDVATEARRQFKSSRDETDPLKVQMLVADATNHLEAMQGSTRGAGSTSG----SWLDIQDPEDKRGRMGEGFPWQR 173
            MHR RVL+LYR ILKRARA+EDKDVA EAR+QFKS   ETDPLKVQM+VADATNHLEAMQGSTRGAGS  G    SWLDI DPEDKRGR+G+GFPWQ+
Sbjct:    1 MHRARVLELYRGILKRARALEDKDVADEARKQFKSCLGETDPLKVQMMVADATNHLEAMQGSTRGAGSGGGGGDHSWLDIHDPEDKRGRVGKGFPWQQ 98          
BLAST of mRNA_P-littoralis_Contig170.67.2 vs. uniprot
Match: A0A835YQF9_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.020e-22
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = 0
Query:   69 KVGRALGLKEFMHRTRVLDLYRSILKRARAIEDK----DVATEARRQFKSSRDETDPLKVQMLVADATNHLEAMQGSTRGAGSTS----GSWLDIQDPEDKRGRMGEGFPWQR 173
            K  +   LK+F+ + +VL  YR +LK ARA+ED+    +VA + R ++++   ETD LK++ML+A+A  H++ +QG+            GSWLD+ DPED+RGR+G GFPWQR
Sbjct:   24 KTSKVPSLKDFVRKRQVLHSYRQLLKCARAMEDRPSGQEVAAQVRERYRAYAHETDSLKLRMLLAEAAQHIDTLQGTVARTSPDMPPPPGSWLDVDDPEDRRGRVGVGFPWQR 136          
BLAST of mRNA_P-littoralis_Contig170.67.2 vs. uniprot
Match: A0A482SDI4_9ARCH (LYR motif-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDI4_9ARCH)

HSP 1 Score: 70.1 bits (170), Expect = 1.950e-12
Identity = 37/111 (33.33%), Postives = 66/111 (59.46%), Query Frame = 0
Query:   70 VGRALGLKEFMHRTRVLDLYRSILKRARAIED----KDVATEARRQFKSSRDETDPLKVQMLVADATNHLEAMQG-----STRGAGSTSGSWLDIQDPEDKRGRMGEGFPW 171
            +G  L L+ F+ R +VL LYR++++ A  + D    +D+ ++ R  F+ +    D L ++ L+ +  ++L+ +QG     S   +    GSW++ +DP DKRGR+GEG+PW
Sbjct:    6 LGETLPLRFFIRRKQVLSLYRNLIRNATRVHDESVQRDIISQIRTDFRRNAHVQDSLVIKSLIQEGNSNLKILQGMAYKDSKAHSIRAQGSWIEQEDPVDKRGRVGEGWPW 116          
BLAST of mRNA_P-littoralis_Contig170.67.2 vs. uniprot
Match: A0A7S4JFV4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JFV4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.340e-9
Identity = 54/161 (33.54%), Postives = 73/161 (45.34%), Query Frame = 0
Query:   22 LPLRAASTMEGAVDAK-GRGADTERGGPSPAXXXXXXXXXXXSLSGGGKVGRALGLKEFMHRTRVLDLYRSILKRARAIEDK----DVATEARRQFKSSRDETDPLKVQMLVADA---TNHLEAMQGSTRG-AGSTSGSWLDIQDPEDKRGRMGEGFPWQR 173
            LPL   S    A  A+ G G  T  GG  P+           S     ++G    LKEF+H+T V+  YR  L+    I D+        E RR F+     TD + + M VAD     N + +M G     +   S SWL+I D EDKRGR+G  +PW +
Sbjct:   11 LPLHGGSRAWFATIARQGGGPRTRSGGILPSKEANDRSGKIKS-----RLGNLPSLKEFVHKTAVVRQYRDFLRAVVMIPDETFRQSALDEVRRTFRQHSFMTDKIAIDMEVADGGRRLNQVRSMVGYVDPRSNDDSDSWLNIDDKEDKRGRVGVEWPWDQ 166          
BLAST of mRNA_P-littoralis_Contig170.67.2 vs. uniprot
Match: A0A8C3AAP9_CYCLU (LYR motif-containing protein 2 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C3AAP9_CYCLU)

HSP 1 Score: 57.0 bits (136), Expect = 2.020e-7
Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   65 SGGGKVG------RALGLKEFMHRTRVLDLYRSILKRARAIED----KDVATEARRQFKSSRDETDPLKVQMLVADATNHLEAMQGSTRGAGS 147
            +G GK+G       AL LK+F+ R RVL +YR++++  R + D    K ++  AR +FK ++  TD   ++M++  A NHLE +QGS   AGS
Sbjct:   27 AGAGKMGVSRLPSAALSLKQFLQRQRVLGIYRNMIRTIRKVPDEADRKYLSDWARDEFKRNKSATDQDAIRMMITQANNHLEELQGSLALAGS 119          
BLAST of mRNA_P-littoralis_Contig170.67.2 vs. uniprot
Match: UPI001C03B48E (LYR motif-containing protein 2 n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C03B48E)

HSP 1 Score: 52.8 bits (125), Expect = 4.020e-6
Identity = 28/71 (39.44%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   73 ALGLKEFMHRTRVLDLYRSILKRARAIED----KDVATEARRQFKSSRDETDPLKVQMLVADATNHLEAMQ 139
            AL LK+F+HR RVL +YR++L+  R + D    K +   AR +F+ ++D T+   ++M++  A NHLE +Q
Sbjct:   10 ALSLKQFLHRQRVLGIYRTMLRTIRQVPDEADRKYLKDWAREEFRRNKDATNQDAIRMMITQARNHLETLQ 80          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig170.67.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JB99_9PHAE8.950e-5361.81Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
D8LRC8_ECTSI8.840e-4579.59Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A835YQF9_9STRA4.020e-2243.36Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A482SDI4_9ARCH1.950e-1233.33LYR motif-containing protein n=1 Tax=archaeon TaxI... [more]
A0A7S4JFV4_9STRA5.340e-933.54Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A8C3AAP9_CYCLU2.020e-738.71LYR motif-containing protein 2 n=2 Tax=Cyclopterus... [more]
UPI001C03B48E4.020e-639.44LYR motif-containing protein 2 n=1 Tax=Melanotaeni... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 84..136
e-value: 9.7E-9
score: 35.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig170contigP-littoralis_Contig170:303727..305116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig170.67.2mRNA_P-littoralis_Contig170.67.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig170 303709..305820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig170.67.2 ID=prot_P-littoralis_Contig170.67.2|Name=mRNA_P-littoralis_Contig170.67.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp
MLRDAKEAFREGHCANRGAAVLPLRAASTMEGAVDAKGRGADTERGGPSP
ARTRSSSSTSTSSLSGGGKVGRALGLKEFMHRTRVLDLYRSILKRARAIE
DKDVATEARRQFKSSRDETDPLKVQMLVADATNHLEAMQGSTRGAGSTSG
SWLDIQDPEDKRGRMGEGFPWQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom