mRNA_P-littoralis_Contig170.56.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig170.56.1
Unique Name	mRNA_P-littoralis_Contig170.56.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: D8LRA5_ECTSI (SEC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA5_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 5.490e-63
Identity = 124/183 (67.76%), Postives = 139/183 (75.96%), Query Frame = 1

Query:   88 MARRDVLCQIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQM 636
            MARRDVLC+IQSVLD LRRNARF      +  +            ES L  +LKALR +VRD  NEDL GLSRLELV PFL VVRSPE NGVLT+AALRS+Q F  +RLIE++SV ASEA+ ++VDAL GCRFEETQ+ HDEAVRARIM V+ ACLEGG G WL DEVVW VLQTCMANLDQM
Sbjct:    1 MARRDVLCEIQSVLDALRRNARFEIREHRSAAE------------ESRLTADLKALREAVRDWPNEDLRGLSRLELVSPFLLVVRSPETNGVLTEAALRSLQVFSRDRLIEENSVHASEAVGDLVDALIGCRFEETQQDHDEAVRARIMHVLAACLEGGAGVWLSDEVVWAVLQTCMANLDQM 171

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: A0A6H5L1A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A5_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.830e-55
Identity = 112/183 (61.20%), Postives = 123/183 (67.21%), Query Frame = 1

Query:   88 MARRDVLCQIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQM 636
            MARRDVLC+IQSVLD LRRNARF     E T+ +           ES L  +LKALR +VRD  NEDL GLSRLELV PFL+VVRSPE NGVLT+AALRS+QAF  +RLI                      FEETQ+ HDEAVRARIM V+ ACLEGG G  L DEVVW VLQTCMANLDQM
Sbjct:    1 MARRDVLCEIQSVLDALRRNARF-----EITEHRSAA-------EESRLTADLKALREAVRDWPNEDLRGLSRLELVSPFLSVVRSPETNGVLTEAALRSLQAFSRDRLIGG--------------------FEETQQDHDEAVRARIMHVLAACLEGGAGVCLSDEVVWAVLQTCMANLDQM 151

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: A0A7R9U6R0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6R0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.990e-28
Identity = 78/208 (37.50%), Postives = 114/208 (54.81%), Query Frame = 1

Query:   94 RRDVLCQIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRLP 717
            R  V+ +I+SV+  LR N  +A    +              + E  L+  LK  R  V     EDL G S L++V P L VVRSP+A+G  T AALR+I++ L    +    V A +A  EV++A+  CRFE+T    DE V A +M V+V C+ G +G ++ DE VW+ LQTC  N + ++ HSP+L   AE  +  ++ +LF  LP
Sbjct:    2 RTFVVHEIRSVIVALRHNIIWASDRLDLP------------DIERPLIDALKRCREKVAAHPYEDLSGFSALDIVAPLLVVVRSPQASGPFTLAALRAIKSLLQRGALASHLVHAPDAANEVIEAVAACRFEQTDAQLDEVVLAELMDVLVCCIRGPLGQYVGDEAVWDALQTCFVNRN-LAVHSPMLNHIAETALEDILCYLFHGLP 196

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: A0A077RSZ0_WHEAT (Uncharacterized protein n=3 Tax=Triticum TaxID=4564 RepID=A0A077RSZ0_WHEAT)

HSP 1 Score: 102 bits (253), Expect = 2.160e-21
Identity = 69/205 (33.66%), Postives = 102/205 (49.76%), Query Frame = 1

Query:  103 VLCQIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRLP 717
            V  ++ +VL ++RRN R+A               G     +  L+  LK+LR +           +  L  + PFL VVRS EA    T AAL S+   L   L+  D+ +A EA+  VV+A+ GCRFE T    +EAV AR ++V++AC+ G     L +  V +++ TC   + Q  A   LLQ  +   +  VVR +F RLP
Sbjct:   23 VTSEVAAVLAIMRRNVRWA-------------AGGDDDPLDHPLVAGLKSLRRAAAAWGTRRWRDVEPLLYLGPFLDVVRSDEAGAPATGAALSSLHKMLSLDLVGPDAPNAVEAMSAVVEAVAGCRFEVTDAASEEAVLARALQVLLACVRGRAAPALSNRHVCDIVNTCFRVVQQAGAKGELLQRVSRQTMQEVVRCVFARLP 214

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: A0A0Q3LJP6_BRADI (SEC7 domain-containing protein n=24 Tax=Pooideae TaxID=147368 RepID=A0A0Q3LJP6_BRADI)

HSP 1 Score: 107 bits (267), Expect = 3.230e-21
Identity = 73/206 (35.44%), Postives = 108/206 (52.43%), Query Frame = 1

Query:  103 VLCQIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNE-DLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRLP 717
            V  +I +VL V+RRN R+A         +YGG      +    L+  LK+LR +     N   + G+  L  + PFL VVRS E    +T AAL S+   L   L+   + + +EA+  VVDA+TGCRFE T    +EAV AR+++V++AC+ G   T L +  V  ++ TC   + Q      LLQ  +   +  V+R +F RLP
Sbjct:   25 VASEIATVLAVMRRNVRWAGV-------RYGGNDEEHVDH--PLIAGLKSLRRAAASWGNGWPVGGVDPLLYLRPFLDVVRSDETGAPITGAALSSLHKILSLDLVPPGAPNVAEAMGAVVDAVTGCRFEVTDPASEEAVLARVLQVLLACVRGRAATALDNRHVCAIVSTCFRVVQQAGTKGELLQRVSRQTMQEVIRCVFSRLP 221

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: A0A5J9T996_9POAL (SEC7 domain-containing protein (Fragment) n=5 Tax=PACMAD clade TaxID=147370 RepID=A0A5J9T996_9POAL)

HSP 1 Score: 106 bits (264), Expect = 7.870e-21
Identity = 76/217 (35.02%), Postives = 111/217 (51.15%), Query Frame = 1

Query:   73 TVFVRMARRDVLC-QIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASER-ESSLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRLP 717
            T+  R+A   VL  ++ +VL V+RRN R+A         +YGG  G   E  +  L+  LK+LR             +  L  + PFL VVRS E    +T AAL S+   L   L+   +  A+EA+  VVDA+TGCRFE T    +EAV AR+++V++AC+ G     L +  V  ++ TC   + Q      LLQ  +   +  V+R +F RLP
Sbjct:   65 TLTPRVAMACVLASEVATVLAVMRRNVRWAGV-------RYGGDDGADDEHLDHPLIAGLKSLRRRAAAWGPSWRDDVEPLLYLRPFLDVVRSDETGAPITGAALSSLHKILTLDLVAPSAPGAAEAMGAVVDAVTGCRFEVTDPASEEAVLARVLQVLLACVRGRAAPALANRHVCAIVSTCFRVVQQAGTKGELLQRVSRQTMQEVIRCVFARLP 274

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: A0A446N5W3_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446N5W3_TRITD)

HSP 1 Score: 99.8 bits (247), Expect = 1.230e-20
Identity = 68/205 (33.17%), Postives = 99/205 (48.29%), Query Frame = 1

Query:  103 VLCQIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRLP 717
            V  ++ +VL ++RRN R+                G     +  L+  LK+LR +           +  L  + PFL VVRS EA    T AAL S+   L   L+  D+  A  A+  VV+A+ GCRFE T    +EAV AR ++V++AC+ G     L +  V +V+ TC   + Q  A   LLQ  +   +  VVR +F RLP
Sbjct:   17 VASEVAAVLAIMRRNVRYG---------------GDEERLDHPLVAGLKSLRRAAATWGPRRWRNVEPLLFLGPFLDVVRSDEAGAPATGAALSSLCKVLSLDLVGPDAPGADRAMAAVVEAVAGCRFEVTDAASEEAVLARALQVLLACVRGRAARALSNRHVCDVVSTCFRVVQQAGAKGELLQRVSRQTMQEVVRCVFARLP 206

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: K4A4U0_SETIT (SEC7 domain-containing protein n=16 Tax=Panicoideae TaxID=147369 RepID=K4A4U0_SETIT)

HSP 1 Score: 104 bits (260), Expect = 2.520e-20
Identity = 72/204 (35.29%), Postives = 104/204 (50.98%), Query Frame = 1

Query:  112 QIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERES---SLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRL 714
            ++ +VL V+RRN R+A         +YGGG G A + E     L+  LKALR       +    G+  L  + PFL VVRS E    +T AAL S+   L   L+   +   +EA+  VVDA+T CRFE T    +EAV AR+++V++AC+       L +  V  V+ TC   + Q      LLQ  +   +  V+R +F RL
Sbjct:   38 EVATVLAVMRRNVRWAGV-------RYGGGDGGAGDEEHLDHPLVAGLKALRRRAAAWGHGRWAGVEPLLYLRPFLDVVRSDETGAPITGAALSSLHKILTLDLVGPGAPGVAEAMGAVVDAVTACRFEVTDPASEEAVLARVLQVLLACVRSRAAPALANRHVCAVVSTCFRVVQQAGTKGELLQRVSRQTMQEVIRSVFSRL 234

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: A0A804UJN2_MAIZE (DCB domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804UJN2_MAIZE)

HSP 1 Score: 100 bits (248), Expect = 3.000e-20
Identity = 72/211 (34.12%), Postives = 106/211 (50.24%), Query Frame = 1

Query:   85 RMARRDVLC-QIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRL 714
            R+A   VL  +  +VL V+RRN R+A+        +YGG  G     +  L+  LKALR       +    G+  L  + PFL VVRS E    +T AAL S+   L   L+   +  A+EA+  VVDA+T CRFE      +EAV AR+++V++AC+       L +  V  ++ TC   + Q      LLQ  +   +  V+R +F RL
Sbjct:   28 RLAMACVLASEAATVLAVMRRNVRWADV-------RYGGA-GDDEHLDHPLVAGLKALRRRAAAWGHGRWTGVEPLLYLRPFLDVVRSDETGAPITGAALSSLHKILTLDLVGPGAPGAAEAMAAVVDAVTACRFEVIDPASEEAVLARVLQVLLACVRSRAALALANRHVCTIVNTCFRVVQQAGTKGELLQRVSRQTMQEVIRTVFARL 230

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BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Match: F2DIW3_HORVV (Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2DIW3_HORVV)

HSP 1 Score: 98.6 bits (244), Expect = 3.530e-20
Identity = 70/205 (34.15%), Postives = 100/205 (48.78%), Query Frame = 1

Query:  103 VLCQIQSVLDVLRRNARFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNEDLCGLSRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAIVEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWEVLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRLP 717
            V  ++ +VL ++RRN R            YGGG       +  L+  LK+LR +           +  L  + PFL VVRS EA    T AAL S+   L       D+  A+ A+  VV+A+ GCRFE T    +EAV AR ++V++AC+ G     L +  V +V+ TC   + Q  A   LLQ  +   +  VVR +F RLP
Sbjct:   19 VTSEVATVLAIMRRNVR------------YGGGD--EERHDHPLVAGLKSLRRAAAAWGPARWRDVDPLLYLGPFLGVVRSDEAGAPATGAALSSLCKVLSLDPFGPDAPGAARAMAAVVEAVAGCRFEVTDAASEEAVLARALQVLLACVRGRAAPALSNRHVCDVVSTCFRVVQQAGAKGELLQRVSRQTMQEVVRCVFARLP 209

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig170.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRA5_ECTSI	5.490e-63	67.76	SEC7 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5L1A5_9PHAE	1.830e-55	61.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7R9U6R0_9STRA	1.990e-28	37.50	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A077RSZ0_WHEAT	2.160e-21	33.66	Uncharacterized protein n=3 Tax=Triticum TaxID=456...	[more]
A0A0Q3LJP6_BRADI	3.230e-21	35.44	SEC7 domain-containing protein n=24 Tax=Pooideae T...	[more]
A0A5J9T996_9POAL	7.870e-21	35.02	SEC7 domain-containing protein (Fragment) n=5 Tax=...	[more]
A0A446N5W3_TRITD	1.230e-20	33.17	Uncharacterized protein n=1 Tax=Triticum turgidum ...	[more]
K4A4U0_SETIT	2.520e-20	35.29	SEC7 domain-containing protein n=16 Tax=Panicoidea...	[more]
A0A804UJN2_MAIZE	3.000e-20	34.12	DCB domain-containing protein n=1 Tax=Zea mays Tax...	[more]
F2DIW3_HORVV	3.530e-20	34.15	Predicted protein n=1 Tax=Hordeum vulgare subsp. v...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig170	contig	P-littoralis_Contig170:250867..255253 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Seed ortholog	2880.D8LRA5
PFAMs	Sec7,Sec7_N
Model size	1270
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K18442,ko:K18443
KEGG Pathway	ko04144,map04144
Hectar predicted targeting category	mitochondrion
GOs	GO:0000137,GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005798,GO:0005802,GO:0005829,GO:0006810,GO:0006888,GO:0006890,GO:0006891,GO:0006914,GO:0006996,GO:0007010,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016236,GO:0019898,GO:0019899,GO:0030029,GO:0030036,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0051020,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061919,GO:0065007,GO:0065009,GO:0071840,GO:0097708,GO:0098772,GO:0098791
Exons	5
Evalue	8.99e-64
EggNOG OGs	COG5307@1\|root,KOG0928@2759\|Eukaryota
Description	regulation of ARF protein signal transduction
Cds size	1266
COG category	L
BRITE	ko00000,ko00001,ko04131

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789825.6013799-CDS-P-littoralis_Contig170:250866..251052	1680789825.6013799-CDS-P-littoralis_Contig170:250866..251052	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig170 250867..251052 +
1680789825.6117778-CDS-P-littoralis_Contig170:251325..251425	1680789825.6117778-CDS-P-littoralis_Contig170:251325..251425	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig170 251326..251425 +
1680789825.6206532-CDS-P-littoralis_Contig170:252609..252741	1680789825.6206532-CDS-P-littoralis_Contig170:252609..252741	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig170 252610..252741 +
1680789825.631323-CDS-P-littoralis_Contig170:253346..253564	1680789825.631323-CDS-P-littoralis_Contig170:253346..253564	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig170 253347..253564 +
1680789825.6418226-CDS-P-littoralis_Contig170:254621..255251	1680789825.6418226-CDS-P-littoralis_Contig170:254621..255251	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig170 254622..255251 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig170.56.1	prot_P-littoralis_Contig170.56.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig170 250867..255251 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig170:250867..255253+
coding sequence from alignment at P-littoralis_Contig170:250867..255253+

protein sequence of mRNA_P-littoralis_Contig170.56.1

>prot_P-littoralis_Contig170.56.1 ID=prot_P-littoralis_Contig170.56.1|Name=mRNA_P-littoralis_Contig170.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=422bp
RCIHFVLFLRQRAVLRLRADALGATVFVRMARRDVLCQIQSVLDVLRRNA
RFAEPSPETTQQQYGGGSGTASERESSLLRELKALRVSVRDCQNEDLCGL
SRLELVLPFLAVVRSPEANGVLTDAALRSIQAFLGERLIEKDSVDASEAI
VEVVDALTGCRFEETQRGHDEAVRARIMKVMVACLEGGVGTWLPDEVVWE
VLQTCMANLDQMSAHSPLLQMAAEDGVFAVVRWLFVRLPGGGGGGGGGSP
RELREKVPPPTTPPPPPPPPPHVHAATRNNSSCCEEAATMLLPGGEPNSL
RRGALQQTQHQHQHQHQHQRKQHRHEQEQTRGNRNDGVLRSEGQEQSQEL
EPDESSSRSRSSPSGNESQGHSQQLQLQLRRRVSPGATATAFAEAGGGGG
GGGCGLPCVVKVFGFLCSQLVK

mRNA from alignment at P-littoralis_Contig170:250867..255253+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig170.56.1 ID=mRNA_P-littoralis_Contig170.56.1|Name=mRNA_P-littoralis_Contig170.56.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4387bp|location=Sequence derived from alignment at P-littoralis_Contig170:250867..255253+ (Pylaiella littoralis U1_48)
AGATGCATACACTTTGTTTTGTTCCTCCGGCAAAGAGCAGTTCTGCGGCT
AAGGGCAGACGCACTCGGTGCTACTGTATTCGTGCGTATGGCGAGAAGAG
ATGTGCTCTGCCAGATTCAGAGCGTATTGGACGTGCTGAGACGCAACGCT
CGTTTCGCCGAACCTTCTCCCGAGACCACCCAGCAGGTAAAACGAACAAG
ACTGCCGTCAATTTTAATTTTTTAACAGGACCGACCCTGAGCTGGCTTGC
TTGGCGACCTTGCTTGACCTTGCTTGTTGGTCACGTGTCGACACAACCCA
TGCCCATGCCCCCATGCGTTGTCCTTTCAAGAGCAAGGTTGACAGCAGTG
AAATATATTCGACTCGAACCAGAAAGAAAAATGGCGTGTGAAAATATGTC
CGCAGCCCGCAGGGTCCGGTTGATATCTTCCGAACTCTCAAACATAATTG
AATTCACAGCAATACGGAGGTGGTTCGGGTACTGCTTCTGAGAGGGAAAG
CTCGTTGTTGAGAGAATTGAAGGCGCTGAGAGTTTCCGTTCGTGACTGCC
AGAATGAAGGTGAGACATCAACAGAGAGAGAGAGAGAGAGAGAGATTTAT
CTGTGTTTGTGTGCTTCAATTTCGTAGAAGAGAATTTCGTAGAAGGGCAC
ACAGTAGTCGCAAGGTTGTTTCTTCTGGTACTTGTTGGACGACAGCAGTA
GCAGTACAAGTACACATGATCGTATCATGGAATATCGTTGACCACAAGTT
TACTTCGGGTGTACGGCAGGAGGTCATTCGCGCGATATCACATGCCAAGG
ATGTGGACCAAGCTCATTGGCCAACGCATGCTGGTTGTATATACAAGTAT
ATTTCACTAGAGTCTACGGTACACCTTGCGCGAAGCAGTACTTCTGCAAA
AAACATCGTGCATCCCGTGCATCCATGGTATCATAGCCCTCGCAGAAGTA
CAATCAGAGGGCACAGCAATGTGTGCGTTTTGTGTGTATGATATGGTTGT
GTTTGCCATCCATTCCTTCTGGACGCCACAGACTTCACCTTTAAATGCTC
CTGTATATCATGTGTGGGCGCATCAGCGGCGGTTACACAGGAAGAAGGTC
AACACATGAGATTTGTTTTTTATTTGCGGTTGCATGTTGTATGTTCAATA
ACTACAAGGGTTTTGTCGTGTGCGCATTCATGACAACAATATGATATTGA
TGTTCGGCCAGCACTCGTTTTCTTTTTTTCCGAGCCAGGCATGGTCTTTC
ACTACTCCTGTACATCAGCAGGGCGGTGTGCTTGTGCACGAAACGTCGGA
GCTACATCACGTCTAGGCCGCATGCTGACAAACGGCGTGAAAGGGTTCGA
GGCCACCTCACTCCTGCTGTCCAAAGTATCATAAGTGGCTGCCCGTTCAC
CGACCTACCCACCACCACCCACCTGTACCACCGGCCACCCTAGCGCACTT
CCTGAATGCATCCGTCACCGCGATATCATCGAAGCACCGGTAGCACTTGG
AGTATGTATACGGAGTATATTTTACCTGGTACACCCCGCCAGGTAAACTA
AAGAGGCTTGGTTGAACACACCGTCAAAGCCACGTGTACAAGTCTTTACC
ACCAACGCTCCCGTTTGCCAAAACACGTTTCATGCTCCGTACTTAAAGTA
TCATATAAGTGACACGCCGTACACTCCCACACGTGTATACCGGTACATCG
ATGCATGCCTGATGTGATACGCCTATGTTTACGATATGGTCAGATCTCTG
CGGGTTGAGCAGGCTGGAGCTGGTCCTTCCGTTTCTCGCGGTCGTGCGGT
CGCCGGAAGCCAATGGAGTTCTCACGGACGCTGCCTTGAGATCGATACAG
GCGTTTTTGGGCGAACGCCTGATTGGTGAGTTCTTGCAAGGCGCGCGCAC
AAGCGCGCTCGTGTGCGTCATGCATGCATCCGGCGCAATTAGCTTTCGCG
GTAGAGATTCATAACGACGGGCTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTAGTTGTTGTCGTTGTTGTTGTTGTCGTTGCTGTTGTCGTTATCGTTGT
CGTTGTCGTCGTCGTCGTCGTTGTCGTTGGTGGTGGTGGTGTAGGTGGTC
TTGGCGTCTTTTTGTGGAGCTGTTGCTGTCGGTGACAAGACAGTAGTACA
AAGAAGAAAAATTACCGCACGACCAAAGAGCCAAATAATCGTCCTCGTTC
GTTCGTTTGGACGTCACCGGACGGTCGAACCCGAACCCAATAGTGTCCGC
TTTTTGTTTTCGTGCCGCGGTCGGCGCTTTCTTTGTTTTTTGAACTCAGC
TCCTCCTCCTCCTCGTCCTCCTCCTCTTCCTCCCCTTCTGATATACCGTA
CGGTATTTGTATGTATGTATGATACTTCGCATATATGTATGTATGTATGT
ATGTATGTATGTTGAATGACGCGAAGAATTAGTGTACAACCAGACTTATT
TTACACCCGCGTGCGCGACACACTTCACAGAGAAGGACTCGGTTGACGCG
TCCGAAGCCATCGTAGAAGTGGTGGACGCGCTTACCGGGTGCAGGTTCGA
AGAGACCCAGCGGGGGCACGACGAGGCCGTGCGAGCGCGCATCATGAAGG
TCATGGTGGCGTGTCTCGAAGGGGGGGTGGGGACGTGGCTACCGGACGAG
GTCGTGTGGGAGGTTCTGCAGACGTGCATGGCCAATCTTGATCAGATGGT
GAGAGAGGGGGAGAGCGAAAGGGATTAAAATGTTGTAGAGAAGGATACCT
TTTTCGTTTTCTTGCAAACATCGGTGTGTTCTTCTAGAAACCACAATAAG
TGATTCCTACCTTTACTGCTGTATCCAATTCCAAGAGATTCCCGCCTGGA
CTACTGCTGTAGGTCCAAAGTTGTTTATTTCTTTTCGCGCGATTTTCAAG
TGATTTCCACCCACGCTCACTCCGGATTATGTTCACCCGTACCATCAAGT
GTAGCTATGTTTCATTATAACGTACTGCGGTACCAGGTAACCTTGAACCC
CCGGCGATATCAATCCGACCCACAGAGCAAACTCTACGTATGTAGCGAGT
ATGTGACCTGCGTCCCAAGCTGTACCAGCATTATTTAGTCGGCGAAAACA
TTTCCCTGTGGTGTATGATGTGTATTCCGTTCTCAAAAGCGTGATCTTGA
TCTCAAATCACCCCCTCAACCCCAACGTTGTTGCCAAACAAACCACCCAG
CTTGCGATAGCATGGATCTGTCTTGTTCTCTCTCTGTTCTCCCTGCTCTC
TCTCTCTCTCTCGCTCCAGACGTCTCTCTGACTCTTTGATTTCCCTACCG
TGCGATACGATGTGCAAATATTGTCCCGCTGAACTGCGACAAGGATATTT
ATCCGGATTCACCTGTTTATAAATGTAATCACCCACCCCACCTGCCGGTC
TTCGCACCCTTCTTACCCTTTGCGTGCATGTCTGCCCCCCCCCCCCCCCT
TCTTTTTTGCGAAACTTGATGCGGTTTCGGTTCGGATCTGGATGGCGACC
ACCACCGGTCGGGTGCCGGACTGGACCGTGCGATGCATATATACGTCGGT
ATCGATCGGTGGTCTCGTCTAACTGCTGTAACCATACCGTCACACCCCTC
ACCCAAACGGCGACAACAACAACAAAAACAACACCGTGCGATGCATATAT
ACGTCGGTATCGATCGGTGGTCTCGTCTAACTGCTGTAACCATACCGTCA
CACCCCTCACCCAAACGGCGACAACAACAACAAAAACAACAACAACAACA
CGTAGTCCGCGCATTCGCCTCTTTTGCAAATGGCCGCCGAGGACGGCGTG
TTTGCGGTTGTACGCTGGCTGTTTGTGCGCCTTCCGGGCGGCGGCGGCGG
CGGCGGCGGCGGTAGCCCCCGTGAACTCCGGGAAAAGGTGCCGCCGCCAA
CAACACCACCACCACCACCGCCACCACCCCCACACGTACACGCAGCAACG
CGTAACAACAGCAGTTGCTGTGAAGAAGCGGCGACCATGCTGTTACCTGG
CGGCGAGCCCAACTCTCTTCGGAGGGGAGCTCTGCAACAAACGCAGCACC
AGCACCAGCACCAGCACCAGCACCAGCGAAAACAACACCGACATGAACAA
GAACAGACCCGGGGCAACAGAAACGATGGCGTTCTCCGGAGCGAGGGGCA
GGAGCAGAGCCAAGAGCTTGAGCCGGACGAAAGCAGCTCGCGAAGCAGGT
CTTCACCGAGCGGAAACGAAAGCCAAGGCCACAGCCAGCAGCTGCAGCTG
CAGCTGCGGCGGCGCGTAAGCCCGGGGGCAACTGCTACTGCTTTTGCCGA
AGCGGGAGGAGGAGGAGGAGGAGGGGGCTGTGGCTTGCCGTGCGTGGTCA
AGGTTTTTGGGTTTTTGTGCTCGCAGCTCGTGAAGAG

Coding sequence (CDS) from alignment at P-littoralis_Contig170:250867..255253+

>mRNA_P-littoralis_Contig170.56.1 ID=mRNA_P-littoralis_Contig170.56.1|Name=mRNA_P-littoralis_Contig170.56.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1266bp|location=Sequence derived from alignment at P-littoralis_Contig170:250867..255253+ (Pylaiella littoralis U1_48)
AGATGCATACACTTTGTTTTGTTCCTCCGGCAAAGAGCAGTTCTGCGGCT
AAGGGCAGACGCACTCGGTGCTACTGTATTCGTGCGTATGGCGAGAAGAG
ATGTGCTCTGCCAGATTCAGAGCGTATTGGACGTGCTGAGACGCAACGCT
CGTTTCGCCGAACCTTCTCCCGAGACCACCCAGCAGCAATACGGAGGTGG
TTCGGGTACTGCTTCTGAGAGGGAAAGCTCGTTGTTGAGAGAATTGAAGG
CGCTGAGAGTTTCCGTTCGTGACTGCCAGAATGAAGATCTCTGCGGGTTG
AGCAGGCTGGAGCTGGTCCTTCCGTTTCTCGCGGTCGTGCGGTCGCCGGA
AGCCAATGGAGTTCTCACGGACGCTGCCTTGAGATCGATACAGGCGTTTT
TGGGCGAACGCCTGATTGAGAAGGACTCGGTTGACGCGTCCGAAGCCATC
GTAGAAGTGGTGGACGCGCTTACCGGGTGCAGGTTCGAAGAGACCCAGCG
GGGGCACGACGAGGCCGTGCGAGCGCGCATCATGAAGGTCATGGTGGCGT
GTCTCGAAGGGGGGGTGGGGACGTGGCTACCGGACGAGGTCGTGTGGGAG
GTTCTGCAGACGTGCATGGCCAATCTTGATCAGATGTCCGCGCATTCGCC
TCTTTTGCAAATGGCCGCCGAGGACGGCGTGTTTGCGGTTGTACGCTGGC
TGTTTGTGCGCCTTCCGGGCGGCGGCGGCGGCGGCGGCGGCGGTAGCCCC
CGTGAACTCCGGGAAAAGGTGCCGCCGCCAACAACACCACCACCACCACC
GCCACCACCCCCACACGTACACGCAGCAACGCGTAACAACAGCAGTTGCT
GTGAAGAAGCGGCGACCATGCTGTTACCTGGCGGCGAGCCCAACTCTCTT
CGGAGGGGAGCTCTGCAACAAACGCAGCACCAGCACCAGCACCAGCACCA
GCACCAGCGAAAACAACACCGACATGAACAAGAACAGACCCGGGGCAACA
GAAACGATGGCGTTCTCCGGAGCGAGGGGCAGGAGCAGAGCCAAGAGCTT
GAGCCGGACGAAAGCAGCTCGCGAAGCAGGTCTTCACCGAGCGGAAACGA
AAGCCAAGGCCACAGCCAGCAGCTGCAGCTGCAGCTGCGGCGGCGCGTAA
GCCCGGGGGCAACTGCTACTGCTTTTGCCGAAGCGGGAGGAGGAGGAGGA
GGAGGGGGCTGTGGCTTGCCGTGCGTGGTCAAGGTTTTTGGGTTTTTGTG
CTCGCAGCTCGTGAAG