mRNA_P-littoralis_Contig1025.34.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1025.34.1
Unique NamemRNA_P-littoralis_Contig1025.34.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 731 bits (1886), Expect = 1.390e-251
Identity = 370/506 (73.12%), Postives = 420/506 (83.00%), Query Frame = 1
Query:    1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEP--ARR-------ARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGLPPLQRSTRSPRPQRQDFPRGGRG 1488
            PP+PLRLLLTGTAGTGKTVVIREMVR VG+QRFILMAPTGNAACAIGGMT+H GFRIPV  + RSSDPS+M+E A+ DLQ+RM  VDFILVDEFSMVGQDMLG+MSARGKQAV GR  DG  D   DVFGGLSIILVGD AQLPPVGA  +W   PS+ GLS+QG QAWL+MNNAVE TQVMRQ GPEQAAFRDTLLRIAEG QT  DW +L++RF + VG+ ERE+F++AVHIFPTN  ADDWNW+RLN L TPIARI+A HT+ GY AV+++RFRGLQ H FLA+GARVF+NNNVWVSAGLANGA+GEVVHMQWAEG  PP LPEVVWVRVENYRGPQ FE PL R W  GE+DLT++ PI P+D+MDD+P   RR       ARC R QLPL LAFGITI+KSQGNTLLRC+LDIG  ++SDGQSFT FSR RTLENMLLEPF+ ERFL+IG S SFQ RL+AIDH+R +E+ TRR+HGLPP+ R+ R PR +R    R GRG
Sbjct:  358 PPSPLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVENRTRRQHGLPPIVRTARPPRTRR----RAGRG 859          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 633 bits (1633), Expect = 1.150e-220
Identity = 321/457 (70.24%), Postives = 370/457 (80.96%), Query Frame = 1
Query:  148 TMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEP--ARR-------ARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGLPPLQRSTRSPRPQRQDFPRGGRG 1488
            T+H GFRIPV  + RSSDPS+M+E A+ DLQ+RM  VDFILVDEFSMVGQD+LG+MSARGKQAV GR  DG  D   DVFGGLSIILVGD AQLPPVGA+ +W   PS+ GLS+QG QAWL+MNNAVE TQVMRQ GPEQAAFRDTLLRIAEG QT  DW +L++RF + VG+ ERE+F++AVHIFPTN  ADDWNW+RLN L TPIARI+A HT+ GY AV+++RFRGLQ H FLA+GARVF++N VWVSAGLANGA+GEVVHMQWAEG  PP LPEVVWVRVENYRGPQ FE PL R W  GE+DLT++ PI P+D+MDD+P   RR       ARC R QLPL LAFGITI+KS GNTLLRC LDIG  ++SDGQSFT FSR RTLENMLLEPF+ ERFL+IG S SFQ RL+AIDH+R +ED TRR+HGLPP+ R+ R PR +R    R GRG
Sbjct:    3 TIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVEDRTRRQHGLPPIVRTARPPRTRR----RAGRG 455          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 569 bits (1467), Expect = 3.650e-182
Identity = 293/483 (60.66%), Postives = 348/483 (72.05%), Query Frame = 1
Query:   49 KTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVTNRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEPAR-------------RARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEP-FARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGLPPLQRSTRSPRP 1455
            + + +REMVR++G+QRF+L+APTGNAACAIGG T+H+G R+ V NR   D  ++SE A  DLQ+++ GVDF+LVDEFSM+GQDMLG+MS R KQAV GR      D HL +FGGL II+VGD  QL  V    MW   P S+ LS QG  AWL MN AV+ TQVMRQ G  QAAFR+TLLRIAEG  T +DW  L+ RFT+ V + ERESF+NAVHIFPTN  ADDWNW+RL  L TPIARIDA H++ GY  + +DRFRGL+   FLAVGARVFINNNVW S GLANGA GEVVHMQWA G+ PPSLPEVVWVRVENYRG Q F  PL R WGG  VDL +++PI+PID  DD P               + RC RTQLPL LAFGITIHKSQG TLLRC+LDIG ++KSDGQ+FT  SR R L+NMLL+P F  ER  RIGTS +F  RL A+  +RE+ + TR ++ L  +    R  RP
Sbjct: 1185 QALAVREMVRQLGRQRFLLLAPTGNAACAIGGETIHTGLRVGVQNRPRGDLGEISESARRDLQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRIGTSRTFGARLDALHRVRELANQTRVQNELDAIDIPPRRHRP 1667          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 531 bits (1369), Expect = 1.340e-169
Identity = 264/340 (77.65%), Postives = 294/340 (86.47%), Query Frame = 1
Query:    1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQ 1017
            PP+PLRLLLTGTAGTGKTVVIREMVR VG+QRFILMAPTGNAACAIGGMT+H GFRIPV  + RSSDPS+M+E A+ DLQ+RM  VDFILVDEFSMVGQDMLG+MSARGKQAV GR  DG  D   DVFGGLSIILVGD AQLPPVGA  +W   PS+ GLS+QG QAWL+MNNAVE TQVMRQ GPEQAAFRDTLLRIAEG QT  DW +L++RF + VG+ ERE+F++AVHIFPTN  ADDWNW+RLN L TPIARI+A HT+ GY AV+++RFRGLQ H FLA+GARVF+NNNVWVSAGLANGA+GEVVHMQWAEG  PP LPEVVWVRVENYRGPQ
Sbjct: 1099 PPSPLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQ 1438          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 2.180e-139
Identity = 208/303 (68.65%), Postives = 244/303 (80.53%), Query Frame = 1
Query:  607 QTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEP--ARR-------ARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGLPPLQRSTRSPRPQRQDFPRGGRG 1488
            QT  DW +L++RF + VG+ ERE+F++AVHIFPTN  ADDWNW+RLN L TPIARI+A HT+ GY AV+++RFRGLQ H FLA+GARVF+NNN WVSAGLANGA+GEVVHMQWAEG  PP LPEVVWVRVENYRGPQ FE PL R W  GE+DLT++ PI P+D+MDD+P   RR       ARC R QLPL LAFGITI+KSQGNTLLRC+LDIG  ++SDGQSFT FSR RTLENMLLEPF+ ERFL+IG S SFQ RL+AIDH+R +ED TRR+HGLPP+ R+ R PR +R    R GRG
Sbjct:    2 QTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVEDRTRRQHGLPPIVRTARPPRTRR----RAGRG 300          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 2.340e-105
Identity = 165/224 (73.66%), Postives = 187/224 (83.48%), Query Frame = 1
Query:   70 MVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQ 738
            MV+ VG+QRFILMAPTGNAACAIGGMT+H GFRIPV  + RSSDPS+M+E A+ DLQ+RM  VDFILVDEFSMVGQDMLG+MSARGKQAV GR  DG  D   DVFGGLSIILVGD A LPPVGA  +W   PS+ GLS+QG QAWL+MNNAVE TQVMRQ GPEQAAFRDTLLRIAEG QT  DW +L++RF + VG+ ERE+F++AVHIFPTN  ADDWNW+
Sbjct:    1 MVKLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWR 224          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 2.310e-102
Identity = 173/231 (74.89%), Postives = 197/231 (85.28%), Query Frame = 1
Query:    1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENA 690
            PP+PLRLLLTGTAGTGKTVVIREMVR VG+QRFILMAPTGNAACAIGGMT+H GFRIPV  + RSSDPS+M+E A+ DLQ+RM  VDFILVDEFSMVGQD+LG++SARGKQAV GR  DG  D   DVFGGLSIILVGD AQLPPVGA  +W   PS+ GLS+QG QAWL+MNNAVE T+VMRQ GPEQAAFRDTLLRIAEG QT  DW +L++RF + VG+ ERE+F++A
Sbjct:  476 PPSPLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLISARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 2.950e-80
Identity = 147/187 (78.61%), Postives = 160/187 (85.56%), Query Frame = 1
Query:    1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGP 558
            PP+PLRLLLTGTAGTGKTVVIREMVR VG+QRFILMAPTGNAACAIGGMT+H GFRIPV  + RSSDPS+M+E A+ DLQ+RM  VDFILVDEFSMVGQDMLG+MSARGKQAV GR  DG  D   DVFGGLSIILVGD AQLPPVGA  +W   PS+ GLS+QG QAWL+MNNAVE TQVMRQ GP
Sbjct:  787 PPSPLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGP 973          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: UPI00077A905F (ATP-dependent DNA helicase PIF1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A905F)

HSP 1 Score: 272 bits (696), Expect = 3.590e-80
Identity = 169/470 (35.96%), Postives = 263/470 (55.96%), Query Frame = 1
Query:    1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVTNRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLG--PEQAAFRDTLLRIAEGTQTRSDW-ILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEPARRARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGT 1401
            P  PL L++ G AGTGK+ +I   +R + +    + A TG AA  I G T+HS  ++PV  R + +   ++  A++ LQ  +  + +I+++E+SM+GQ MLG +  R +QA       G  D   +VFG LS+IL GD AQLPPV  + +++  P+S+ +  QGH A+L   N ++ +   R  G  PEQ+ FR+ L R+  G  T  DW +LL ++ T+    VE   F++A  ++ +N++  ++N ++L+ L+ PIA ++AHH+    +  + D   GL+P  FLA GA V +  N+W + GL NGA G V+   +A    PP LPE V V+ +NYRGP   E             ++  +PI PI +            R QLPL LA+ ITIHKSQG TL + ++DIG  +++ G S+   SR RTL + ++EP   ER   I  S S + R+   + + E+ + T
Sbjct:   88 PKDPLFLIVNGVAGTGKSYLINA-IRNLLRTSCAVTATTGKAAYNINGCTIHSLLKLPVGTRGNKE---LTARALVRLQNNLKRIAYIIIEEYSMLGQTMLGWIDRRCRQAT------GISD---EVFGHLSLILFGDPAQLPPVADRPLYHSKPTSS-IGEQGHLAYLMFTNVIKLSVNQRVQGSNPEQSQFRELLTRLHTGDCTEQDWKLLLTRQPTNAPNLVE---FQDATRLYFSNEEVANYNVEKLSALQHPIACVNAHHSSDLAKKASPDEMAGLEPCIFLAKGAHVMLTLNLWTAVGLCNGATGTVIDFIYANNQQPPDLPEAVIVKFDNYRGPSITES------------ISSCVPICPITVSSQ--TLDGLHERQQLPLKLAWAITIHKSQGLTLPKAWIDIGQTERTAGISYVAISRVRTLSSCIIEPMTFERLKSIKKSASLKFRIEEEERLNELAEQT 526          
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A)

HSP 1 Score: 266 bits (680), Expect = 5.290e-76
Identity = 170/470 (36.17%), Postives = 255/470 (54.26%), Query Frame = 1
Query:   10 PLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVTNRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGP--EQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEPARRARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRH 1413
            PL L++ G AGTGK+ +I  + R + + +  + A TG A+  I G+T+HS  ++PV  R + D   +S   +  LQ+++  +++IL+DE+SM+GQ   G +  R KQA       G HD    V GG+S+IL+GD  QLPPV  K +++  PS+  +  QG+  +   +  V+ T   R  G   EQ  FR+ LLR+ +G  T  DW LL  R  S + ++    F +A  +F +ND+   +N  +L  L  P A I+A H+    +++ +D   GLQP   +A GA+V +  N+W S GL NGA G VV + +A    PP LP  V VR +NY+GP   E            DL   +PI PI +     A      R QLPL LA+ +TIHKSQG TL + ++DIG  +K+ G S+   SR +TL ++++EP   ER   I +S +   RL     +  + + TR  H
Sbjct:  274 PLCLIIIGVAGTGKSYLINAL-RSLLQNKCSVTATTGKASFNIQGITVHSLLKLPVGPRGAKD---LSGQTLSRLQEKLNEIEYILIDEYSMLGQTTFGWIDKRCKQAT------GFHD---KVHGGMSMILIGDPGQLPPVVDKPLYHAQPSNP-IGEQGYLTYQMFDKVVKLTANQRVQGSSSEQQQFRELLLRLRKGESTVQDWKLLLTRQPSCIENISE--FNDATRLFYSNDEVSAYNLDQLTKLMEPCANINARHSSVTAKSLPSDEMSGLQPSISIAKGAKVMLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGPSLRE------------DLPMCVPICPITV--SAQALEGVQERQQLPLKLAYALTIHKSQGLTLSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAIKSSTTLHYRLEEESRLDYLAESTRASH 713          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K558_9PHAE1.390e-25173.12ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KDL6_9PHAE1.150e-22070.24ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE3.650e-18260.66ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE1.340e-16977.65ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KGT1_9PHAE2.180e-13968.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDM0_9PHAE2.340e-10573.66ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5KA18_9PHAE2.310e-10274.89ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KIQ7_9PHAE2.950e-8078.61ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI00077A905F3.590e-8035.96ATP-dependent DNA helicase PIF1-like n=1 Tax=Acrop... [more]
UPI000A2A6B3A5.290e-7636.17uncharacterized protein LOC110247455 n=1 Tax=Exaip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1025contigP-littoralis_Contig1025:75830..77878 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog38033.XP_001223636.1
PFAMsHelitron_like_N,MULE,PIF1
Model size1903
Max annot lvl4751|Fungi
KEGG koko:K15255
Hectar predicted targeting categorymitochondrion
Exons2
Evalue3.09e-54
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota,39RYU@33154|Opisthokonta,3P64X@4751|Fungi,3QU0F@4890|Ascomycota,21AWX@147550|Sordariomycetes,3UC2G@5139|Sordariales,3HG3S@35718|Chaetomiaceae
EC3.6.4.12
DescriptionBelongs to the helicase family
Cds size1542
COG categoryL
BRITEko00000,ko01000,ko03029,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789363.8443828-UTR-P-littoralis_Contig1025:75829..758981680789363.8443828-UTR-P-littoralis_Contig1025:75829..75898Pylaiella littoralis U1_48UTRP-littoralis_Contig1025 75830..75898 +
1680789363.881685-UTR-P-littoralis_Contig1025:77586..778781680789363.881685-UTR-P-littoralis_Contig1025:77586..77878Pylaiella littoralis U1_48UTRP-littoralis_Contig1025 77587..77878 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789363.8582704-CDS-P-littoralis_Contig1025:75898..759761680789363.8582704-CDS-P-littoralis_Contig1025:75898..75976Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 75899..75976 +
1680789363.8699472-CDS-P-littoralis_Contig1025:76122..775861680789363.8699472-CDS-P-littoralis_Contig1025:76122..77586Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 76123..77586 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1025.34.1prot_P-littoralis_Contig1025.34.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1025 75899..77586 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1025.34.1

>prot_P-littoralis_Contig1025.34.1 ID=prot_P-littoralis_Contig1025.34.1|Name=mRNA_P-littoralis_Contig1025.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=514bp
MVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVTNRRSSDPSQMSEG
AIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDG
HLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNN
AVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVE
RESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTAD
RFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPS
LPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEPA
RRARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFS
RYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGL
PPLQRSTRSPRPQRQDFPRGGRGRGGGGGPGSQPGRGRQNEGRGAPGRGR
PSDAGGRGQGGRG*
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mRNA from alignment at P-littoralis_Contig1025:75830..77878+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1025.34.1 ID=mRNA_P-littoralis_Contig1025.34.1|Name=mRNA_P-littoralis_Contig1025.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2049bp|location=Sequence derived from alignment at P-littoralis_Contig1025:75830..77878+ (Pylaiella littoralis U1_48)
CCTCCGGCTCCACTCCGTTTGCTGCTTACGGGAACCGCAGGGACCGGAAA GACTGTCGTCATCCGGGAGATGGTCAGGAGGGTCGGAAAGCAGCGCTTCA TTCTCATGGCCCCGACGGGCAACGCGGCTTGCGCTATTGGAGGAATGGTG AGAGATGTCGACCTGCCGTCCTCGCATGCTGTACGTTTCAATAACCAACC TGTGTCTAGAATGAAGGGAGTGCTCATGCACCCACCAAACCTCACATAAT CCACGTTCGACTCTCTCATCCCCTCAAATCCCCCTTGATGCAGACCATGC ACAGCGGTTTCAGGATTCCCGTCACCAACCGACGTTCGTCCGACCCCAGC CAAATGAGTGAGGGTGCCATCATGGACCTCCAGAAGCGCATGACCGGCGT CGATTTCATCCTCGTCGACGAGTTCTCCATGGTGGGCCAAGACATGTTGG GCGTCATGAGCGCCAGAGGCAAGCAGGCCGTTCGAGGCCGGATCCGAGAC GGGGATCATGACGGACACCTCGACGTCTTCGGAGGTCTCAGCATCATCCT CGTTGGTGACTGCGCTCAGCTCCCCCCAGTCGGGGCCAAGTCCATGTGGA ACCCCGTCCCTTCCTCCACCGGCCTTAGCGTGCAAGGGCATCAGGCATGG TTGGCAATGAACAACGCAGTTGAGTTCACACAGGTCATGCGCCAACTAGG CCCTGAGCAGGCCGCCTTCCGAGACACACTCCTGCGGATCGCGGAAGGCA CTCAGACCCGGAGCGACTGGATCCTTCTGCAGCAGAGGTTCACGTCACAG GTCGGAAGCGTCGAACGCGAGTCTTTCGAAAACGCTGTCCACATCTTCCC GACGAACGACAAGGCCGACGATTGGAACTGGCAGCGGTTGAACCTCCTCC GCACTCCCATCGCAAGGATCGATGCCCACCACACCGTCCAAGGCTACCGC GCCGTCACCGCCGACAGGTTCAGAGGCTTGCAGCCCCACCGTTTCCTCGC GGTCGGGGCGCGCGTCTTCATCAACAACAACGTCTGGGTCTCAGCGGGTC TGGCGAACGGTGCCATCGGCGAGGTCGTCCACATGCAATGGGCGGAGGGC AGCGCACCGCCATCGCTGCCGGAAGTCGTGTGGGTGCGAGTTGAGAACTA CCGGGGGCCTCAGGACTTCGAGGGCCCGCTCACACGGCAGTGGGGTGGTG GTGAGGTAGACCTCACCGACATCATCCCCATCACTCCCATCGACCTCATG GACGATGAACCTGCCCGCAGGGCTCGCTGCCATAGGACGCAGTTGCCGTT GGCGCTAGCTTTCGGCATTACCATCCACAAGAGTCAAGGCAACACCCTCT TGCGCTGCTACTTGGACATTGGACCAAGGAAAAAGAGCGACGGCCAGTCC TTCACTACCTTCAGCCGGTACCGAACCCTCGAGAACATGCTGCTCGAGCC CTTCGCCCGTGAGCGATTCCTCAGGATAGGCACAAGCAACTCCTTCCAAG GCCGACTCCACGCCATCGACCACATACGGGAGATTGAGGATGGAACACGT CGCCGTCATGGACTGCCTCCCCTGCAGAGATCGACGCGGTCGCCGAGACC CCAGCGGCAGGACTTTCCGCGAGGGGGACGTGGCCGCGGGGGTGGAGGAG GACCGGGAAGTCAGCCCGGGCGTGGACGACAAAACGAAGGGCGGGGAGCG CCTGGGCGAGGACGACCGTCTGACGCAGGAGGCCGAGGCCAAGGTGGTAG GGGGTAGACCGAACCTCTCCCTCCCGCCGCCGGTGCTACAGTGGGAGGAG TACGCCGTCAAGGGGATGCAGGACTCGACCACGGACTCTTGGCTGTACGT CCCCTTCCTCCTTGACGCATTCGGGATGGACCGCTTCCCACTCTTCCACA GCCCACCTTGGTGGCAACCGGCCGTCGCGCACTTCACCCCCGTTCTCACC AACGAAGGGCTGCACCAACAACAAGCAAACTTCGTCCAAGACTACTCAAC CAGGACACAGCGGGTGAATGTTCGCCGTATGGGACCTTTCACATCCCTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1025:75830..77878+

>mRNA_P-littoralis_Contig1025.34.1 ID=mRNA_P-littoralis_Contig1025.34.1|Name=mRNA_P-littoralis_Contig1025.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1542bp|location=Sequence derived from alignment at P-littoralis_Contig1025:75830..77878+ (Pylaiella littoralis U1_48)
ATGGTCAGGAGGGTCGGAAAGCAGCGCTTCATTCTCATGGCCCCGACGGG
CAACGCGGCTTGCGCTATTGGAGGAATGACCATGCACAGCGGTTTCAGGA
TTCCCGTCACCAACCGACGTTCGTCCGACCCCAGCCAAATGAGTGAGGGT
GCCATCATGGACCTCCAGAAGCGCATGACCGGCGTCGATTTCATCCTCGT
CGACGAGTTCTCCATGGTGGGCCAAGACATGTTGGGCGTCATGAGCGCCA
GAGGCAAGCAGGCCGTTCGAGGCCGGATCCGAGACGGGGATCATGACGGA
CACCTCGACGTCTTCGGAGGTCTCAGCATCATCCTCGTTGGTGACTGCGC
TCAGCTCCCCCCAGTCGGGGCCAAGTCCATGTGGAACCCCGTCCCTTCCT
CCACCGGCCTTAGCGTGCAAGGGCATCAGGCATGGTTGGCAATGAACAAC
GCAGTTGAGTTCACACAGGTCATGCGCCAACTAGGCCCTGAGCAGGCCGC
CTTCCGAGACACACTCCTGCGGATCGCGGAAGGCACTCAGACCCGGAGCG
ACTGGATCCTTCTGCAGCAGAGGTTCACGTCACAGGTCGGAAGCGTCGAA
CGCGAGTCTTTCGAAAACGCTGTCCACATCTTCCCGACGAACGACAAGGC
CGACGATTGGAACTGGCAGCGGTTGAACCTCCTCCGCACTCCCATCGCAA
GGATCGATGCCCACCACACCGTCCAAGGCTACCGCGCCGTCACCGCCGAC
AGGTTCAGAGGCTTGCAGCCCCACCGTTTCCTCGCGGTCGGGGCGCGCGT
CTTCATCAACAACAACGTCTGGGTCTCAGCGGGTCTGGCGAACGGTGCCA
TCGGCGAGGTCGTCCACATGCAATGGGCGGAGGGCAGCGCACCGCCATCG
CTGCCGGAAGTCGTGTGGGTGCGAGTTGAGAACTACCGGGGGCCTCAGGA
CTTCGAGGGCCCGCTCACACGGCAGTGGGGTGGTGGTGAGGTAGACCTCA
CCGACATCATCCCCATCACTCCCATCGACCTCATGGACGATGAACCTGCC
CGCAGGGCTCGCTGCCATAGGACGCAGTTGCCGTTGGCGCTAGCTTTCGG
CATTACCATCCACAAGAGTCAAGGCAACACCCTCTTGCGCTGCTACTTGG
ACATTGGACCAAGGAAAAAGAGCGACGGCCAGTCCTTCACTACCTTCAGC
CGGTACCGAACCCTCGAGAACATGCTGCTCGAGCCCTTCGCCCGTGAGCG
ATTCCTCAGGATAGGCACAAGCAACTCCTTCCAAGGCCGACTCCACGCCA
TCGACCACATACGGGAGATTGAGGATGGAACACGTCGCCGTCATGGACTG
CCTCCCCTGCAGAGATCGACGCGGTCGCCGAGACCCCAGCGGCAGGACTT
TCCGCGAGGGGGACGTGGCCGCGGGGGTGGAGGAGGACCGGGAAGTCAGC
CCGGGCGTGGACGACAAAACGAAGGGCGGGGAGCGCCTGGGCGAGGACGA
CCGTCTGACGCAGGAGGCCGAGGCCAAGGTGGTAGGGGGTAG
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