mRNA_P-littoralis_Contig17.141.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig17.141.1
Unique NamemRNA_P-littoralis_Contig17.141.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 603 bits (1556), Expect = 2.670e-209
Identity = 308/564 (54.61%), Postives = 378/564 (67.02%), Query Frame = 1
Query:  124 VCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVLAPTRLIWHQEQAGIISNSCPTATGSFGQRVSAPSGSHDDYGAVSWTWEMR-RPDSSDNFYWQLYKSLAAYRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGCGG-GFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKECSQTLAEWANLRCRTLLPAVGMNDARRTDAMLSSDPRAWEQLTKDSSPEPTSGRETSDTKGGPFPIGETLR--------YTTVATTEDIYRVYSKLVALRDAVLVPVYSSTEDSTLVFGNFEAKNSSRSNRWDGWQMLPPWSVYSLRDCPLSQSRFPGVSPHIVSYFTMGVPLVRELAHALECFVHGLVKKSGGSDDDFDGSSCEGTRPLEVVMIDVALHTEELGICTADHGLGLSAGDHVWSFFREPVVNCKGYGNLGDE 1785
            +C SGAIRSFVH AVH SI+ NLIE+IKADGCEVDVFAY TR   V + K+ E NPEFTPN+SD+E ALAVL PTRL+WHQ+QAGII N C           S  S  H       W WE R  P++S + YWQLYKSLAAYRMAL+EE+R G GF YDW+IRGR DVAW RPLPPLRSF R+AVW GRHYWP+SD FALVPR FSD+FF A+  FYACD +SW PP++WWQP C   GFEESVLFRHLHA  +P+R+Y +F++ I RG +GG+C+LG  ++ E C+LL +  A Q P +   C + LAE+++LRCRTL PA GM D RR DA+L  +PRAWE L  DSSP      E       P P+G            YT+VA  ED+     KLV LRDA+  P  S  E    +    EAK  S  +RW GW+  P W ++S+  CPL++ + PG SPH+V Y+TMG PLVREL  +++CFV  ++ ++     D + SSC G R L++VMIDV+LHTEELGICTAD  LGLSA + V  FF  P  +C GYG L  E
Sbjct:    1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVE-NPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGVNNRTD--ASRHSARH------LWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLLGLWNALQPPFSRDHCLEALAEYSDLRCRTLFPARGMEDERRVDAILDPEPRAWEALL-DSSPL----LEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAEDVDSARLKLVLLRDALQAP--SPLEPHYEMALREEAKERSLLDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVQSVKCFVSRIIGETQVGGGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASEQVSRFFDNPAAHCAGYGRLDSE 548          
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 4.440e-85
Identity = 227/672 (33.78%), Postives = 301/672 (44.79%), Query Frame = 1
Query:  112 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVLAPTRLIWHQEQAGIISNSC-PTAT------------GSF-----------GQRVSAPSGSHDDYGAVSWTWEMRRPDS-------SDNFYWQLYKSLAAYRMALKEERRKGHGFV-----------YDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDD---QSWQPPATWWQPGCG-------------------------------GGFE-----------------------ESVLFRHLHAHNVPHRYYLMFEYEI-------------ARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKECSQTLAEWANLRCRTL--LPAVGM-NDARRTDAMLSSDPRAWEQLTKDSSPEPTSGRETSDTKGGPFPIGETLRYTTVATTEDIYRVYSKLVALRDAVLVPVYSSTEDSTLVFGNFEAKN-------SSRSN--RWDGW---------------QMLPPWSVYSLRDCPLSQSRFPGVSPHIVSYFTMGVPLVRELAHALECFVHGLVK-----KSGGSDDDFDGSSCEGTRPLEVVMIDVALHTEELGICTADH 1695
            C VAV +SG +RSFV   +H S + +++EAIKA+GC VDVF YA+       G E     +      +IE  +  L+PT+L+WHQEQAGII NSC PTAT             SF           G  V   + S+   G  S   E  +P S       S+ FYWQLY+SLAAYR+A++ E  K                YDWI+  RFDVAW + LP  R+F R+ VW     WP+S  FALVPRAFSD+FF A+ AF+ACDD    SW P   WWQP CG                               GGFE                       ES+++RHLHA  VP+R Y MFEY               A G     C+     +   C LL     F     S+EC+  L+EW++L CRT   L A G  +   R    L  D   W + +    P+     ET    G      E  R       ED+ R +  L ALRDAV+V     +E+  ++ G+  A         +SR N  + DG                Q    WSV+S   C L++  +PG +PHI+ + +     +RELA A +C  H  ++      S   D  FD + C  +R LE+VMIDV+LH+ E+      H
Sbjct:   39 CAVAVSISGDVRSFVDPVLHRSFRRHVVEAIKAEGCTVDVFVYASL------GDEDLLVEQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDNRSNQPRGHASK--EPSKPPSREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEHGQENGNSSGNVHSGGNLHHSPRSGPAGGGGGFELRGSDDGSIFHDNRGGGRGEGFGESIVYRHLHASGVPYRPYPMFEYYTVPPYVRDGDADGDAAGDTRSGCETSTPDYFTGCVLLGTVGLFSQAYTSEECATALSEWSSLHCRTSTHLEATGPGHQTERGSENLDPDLTTWPRSSVGVYPD-----ETETDNGDVLGAAEADR----VQEEDLRRAWFNLAALRDAVIVAADDGSEE--VMHGSSNAGEEDTPSGETSRRNLGKEDGGDHDAAPKPSGSSPTRQTNRSWSVHSQGGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFIEGATAWSSVNEDFGFDATVCASSRSLELVMIDVSLHSAEVQAMEVTH 689          
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 3.250e-61
Identity = 180/536 (33.58%), Postives = 231/536 (43.10%), Query Frame = 1
Query:  112 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVLAPTRLIWHQEQAGIISNSC-PTAT------------GSF-----------GQRVSAPSGSHDDYGAVSWTWEMRRPDS-------SDNFYWQLYKSLAAYRMALKEERRKGHGFV-----------YDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDD---QSWQPPATWWQPGCGG------------------------------------------------------GFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKECSQTLAEWANLRCRTLLPAVGMNDARRTDAMLSSDPRAWEQL--TKDSSPEPTS-GRETSDTKGGPFPIGETLRYTTVATT----------------------EDIYRVYSKLVALRDAVLVPVYSSTEDST 1347
            C VAV +SG +RSFV   VH S Q +++EAIKA+GC VDVF YA+       G E     +      +IE  +  L+PT+L+WHQEQAGII NSC PTAT             SF           G  V   + S+   G VS   E  +P         S+ FYWQLY+SLAAYR+A++ E  K                YDWI+  RFDVAW   +P LR+F R+ VW     WP+S  FALVPRAFSD+FF A+ AF+ACDD    SW P   WWQP CG                                                       GF ES+++RHLHA  VP+R Y MFEY     A+    + G    G A       EA  S                L    LL  VG+     T    ++    W  L     + PE TS GR+T        P  +    ++V  +                      ED+ R +S LVALRDAV++     +E++T
Sbjct:   38 CAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASL------GDEDLLEEQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSK--EPSKPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEYY----AVPPYVRDGDVDGGAARDTRSGCEASTSDY--------------LTGCVLLGTVGLFSPAYTSEACATALSEWSSLHCRASTQPEATSTGRQTERASKNLNPYLKAWPRSSVGVSSGEAKTHRGDVFGTAEEDRVQEEDLKRAWSNLVALRDAVILAADDDSEEAT 547          
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A7S2WLT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLT0_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 7.920e-18
Identity = 106/335 (31.64%), Postives = 143/335 (42.69%), Query Frame = 1
Query:  112 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVL--------APTRLIWHQEQA----GIISNSCPTATGSFGQRVSAPSGSHDDYGAVSWTWEMRRPDSSDNFYWQLYKSLAA-YRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGC---GGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKE-CSQTLAEWANLRC 1065
            CRVAVC+SG  R+F H  V  +   NL+ A++   CEVD+F        V  G+  E     T   S  E  L VL        +  RL+   E      G  S   P  TG+   +  A  G        S +       S+    W   +S+++   + L+EER +     Y W+IR RFD++++ PLPPL S  R+AV V     PISD FA+VPRA+ D +F A        D  W+     W+      G G  E VL   L A   P + +  +   I R      CQ G   F   C L+    A     NS E CS +LA    L C
Sbjct:  476 CRVAVCMSGQWRTFAHPLVRQTFHQNLLGALETS-CEVDLFLCIKPSDQVA-GRRNEHFSRTTAAPSTREAILEVLRAELPDVLSRVRLVLADEPLPQSNGQTSALYPLDTGTSFPKACANGGGD----CCSRSQPSAEVQSALAAAWPSLESVSSCLDLVLREERLRQQD--YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMA-------SDLCWRGACHRWRARDFPKGAGSTELVLLAALRAAEAPVQLH-DWPLSIVRAPPDSPCQ-GLPQFQIPCALMTAVGAVH--WNSVEACSASLATPLLLLC 791          
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A7S2WMN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.940e-10
Identity = 63/176 (35.80%), Postives = 82/176 (46.59%), Query Frame = 1
Query:  550 MALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGC---GGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKE-CSQTLAEWANLRC 1065
            + L+EER +     Y W+IR RFD++++ PLPPL S  R+AV V     PISD FA+VPRA+ D +F A        D  W+     W+      G G  E VL   L A   P + +  +   I R      CQ G   F   C L+    A     NS E CS +LA    L C
Sbjct:    9 LVLREERLRQQD--YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMA-------SDLCWRGACHRWRARDFPKGAGSTELVLLAALRAAEAPVQLH-DWPLSIVRAPPDSPCQ-GLPQFQIPCALMTAVGAVH--WNSVEACSASLATPLLLLC 171          
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A0D2W0T8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2W0T8_CAPO3)

HSP 1 Score: 65.5 bits (158), Expect = 1.090e-7
Identity = 52/176 (29.55%), Postives = 73/176 (41.48%), Query Frame = 1
Query:  520 QLYKSLAAYRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGCGGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMC--QLGHAIFGEACTLLQMAEAFQSPLNSKECSQTL 1041
            Q    L +Y +AL  E + G  F  DWI+R R DV +  PLP L S        G     +S+QFA+VPR FSD F +              PP    +  C    +   L   L A+N+P+  +    + I R   G  C    G    G  C L ++ EA    + +   S+ L
Sbjct:  197 QSLSILDSYSLALDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEHQLSNQFAIVPRKFSDVFLRL-------------PPV---EIECAANNDNDRLRLWLDANNIPYYRHKAIHFTIVRAYYGAECFRSCGGFGVGSQCELRKVCEAMFGEITNDRKSKKL 354          
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: UPI0001FE4FEA (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE4FEA)

HSP 1 Score: 65.5 bits (158), Expect = 2.270e-7
Identity = 52/176 (29.55%), Postives = 73/176 (41.48%), Query Frame = 1
Query:  520 QLYKSLAAYRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGCGGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMC--QLGHAIFGEACTLLQMAEAFQSPLNSKECSQTL 1041
            Q    L +Y +AL  E + G  F  DWI+R R DV +  PLP L S        G     +S+QFA+VPR FSD F +              PP    +  C    +   L   L A+N+P+  +    + I R   G  C    G    G  C L ++ EA    + +   S+ L
Sbjct:  197 QSLSILDSYSLALDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEHQLSNQFAIVPRKFSDVFLRL-------------PPV---EIECAANNDNDRLRLWLDANNIPYYRHKAIHFTIVRAYYGAECFRSCGGFGVGSQCELRKVCEAMFGEITNDRKSKKL 354          
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A0D2US65_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2US65_CAPO3)

HSP 1 Score: 61.2 bits (147), Expect = 2.600e-6
Identity = 87/353 (24.65%), Postives = 133/353 (37.68%), Query Frame = 1
Query:  121 AVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVLAPTR----LIWHQEQAGIISNSCPTATGSFGQRVSAPSGSHDDYGAVSWTWEMRRPDSSDNFYWQLYKSLAAYRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGCGGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFG--EACTLLQMAEA-FQSPLNSKECSQTLAEWANLRCRTLLPAVGMNDARRTDAMLSSDPRAWEQLTK 1158
            AV  SG +RSF + A+  S++ NL+ A+   G  + +F+ +        G     + E      D+  AL  L P +    ++W   Q                  V  P  +H+            RP        Q    L +Y + L  E + G  F  DWI+R R DV +  PLP L S        G   + +S+QFALVPR +SD FF+              PP    +  C    +   L   L  +N P+  +    + I R   G  C      FG    C L ++ EA F    N ++  +  A+      +T  P  G + +  + A +    R +   TK
Sbjct:  101 AVAFSGTMRSFKYPALLDSLRNNLLAAL---GGTILIFSNSRLEDWPRSGLGCANSQE------DLFDALRDLLPGKAEHFVVWRSFQ------------------VPDPMWTHNC---------ASRPSLI-----QSLSVLDSYSLVLDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEYQLSNQFALVPRKYSDVFFQL-------------PPR---EIECAVENDNDRLRLWLDTNNTPYYRHKAIHFTIVRAYYGAECFRSCNGFGVGSQCELRKVCEAMFGEITNDRKSKKVDAQLLISELKT--PHAGCSVSLSSPAPVHLKERKFRSRTK 392          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FK46_ECTSI2.670e-20954.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5E2_ECTSI4.440e-8533.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ6_9PHAE3.250e-6133.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WLT0_9STRA7.920e-1831.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WMN0_9STRA4.940e-1035.80Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0D2W0T8_CAPO31.090e-729.55Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
UPI0001FE4FEA2.270e-729.55hypothetical protein n=1 Tax=Capsaspora owczarzaki... [more]
A0A0D2US65_CAPO32.600e-624.65Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig17contigP-littoralis_Contig17:622518..627433 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5E2
Model size1788
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue7.28e-86
EggNOG OGs2CY2I@1|root,2S1H1@2759|Eukaryota
Cds size1788
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig17.141.1prot_P-littoralis_Contig17.141.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig17 622518..627433 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789819.0331042-CDS-P-littoralis_Contig17:622517..6227931680789819.0331042-CDS-P-littoralis_Contig17:622517..622793Pylaiella littoralis U1_48CDSP-littoralis_Contig17 622518..622793 +
1680789819.0425801-CDS-P-littoralis_Contig17:623134..6233411680789819.0425801-CDS-P-littoralis_Contig17:623134..623341Pylaiella littoralis U1_48CDSP-littoralis_Contig17 623135..623341 +
1680789819.051349-CDS-P-littoralis_Contig17:623540..6237521680789819.051349-CDS-P-littoralis_Contig17:623540..623752Pylaiella littoralis U1_48CDSP-littoralis_Contig17 623541..623752 +
1680789819.060087-CDS-P-littoralis_Contig17:624556..6248801680789819.060087-CDS-P-littoralis_Contig17:624556..624880Pylaiella littoralis U1_48CDSP-littoralis_Contig17 624557..624880 +
1680789819.0727735-CDS-P-littoralis_Contig17:625175..6256171680789819.0727735-CDS-P-littoralis_Contig17:625175..625617Pylaiella littoralis U1_48CDSP-littoralis_Contig17 625176..625617 +
1680789819.0827003-CDS-P-littoralis_Contig17:626211..6263751680789819.0827003-CDS-P-littoralis_Contig17:626211..626375Pylaiella littoralis U1_48CDSP-littoralis_Contig17 626212..626375 +
1680789819.0915637-CDS-P-littoralis_Contig17:626732..6267781680789819.0915637-CDS-P-littoralis_Contig17:626732..626778Pylaiella littoralis U1_48CDSP-littoralis_Contig17 626733..626778 +
1680789819.1013594-CDS-P-littoralis_Contig17:627316..6274331680789819.1013594-CDS-P-littoralis_Contig17:627316..627433Pylaiella littoralis U1_48CDSP-littoralis_Contig17 627317..627433 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig17.141.1

>prot_P-littoralis_Contig17.141.1 ID=prot_P-littoralis_Contig17.141.1|Name=mRNA_P-littoralis_Contig17.141.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=596bp
MRPNVGISASSSIEEQTNQRRIRHGSDESDELGDTGACRVAVCLSGAIRS
FVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFT
PNASDIETALAVLAPTRLIWHQEQAGIISNSCPTATGSFGQRVSAPSGSH
DDYGAVSWTWEMRRPDSSDNFYWQLYKSLAAYRMALKEERRKGHGFVYDW
IIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFF
KAITAFYACDDQSWQPPATWWQPGCGGGFEESVLFRHLHAHNVPHRYYLM
FEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKECSQTLAEW
ANLRCRTLLPAVGMNDARRTDAMLSSDPRAWEQLTKDSSPEPTSGRETSD
TKGGPFPIGETLRYTTVATTEDIYRVYSKLVALRDAVLVPVYSSTEDSTL
VFGNFEAKNSSRSNRWDGWQMLPPWSVYSLRDCPLSQSRFPGVSPHIVSY
FTMGVPLVRELAHALECFVHGLVKKSGGSDDDFDGSSCEGTRPLEVVMID
VALHTEELGICTADHGLGLSAGDHVWSFFREPVVNCKGYGNLGDE*
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mRNA from alignment at P-littoralis_Contig17:622518..627433+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig17.141.1 ID=mRNA_P-littoralis_Contig17.141.1|Name=mRNA_P-littoralis_Contig17.141.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4916bp|location=Sequence derived from alignment at P-littoralis_Contig17:622518..627433+ (Pylaiella littoralis U1_48)
ATGCGGCCCAATGTTGGTATCAGTGCGAGCAGCAGCATCGAAGAGCAAAC AAACCAAAGGCGAATACGGCATGGCTCTGATGAAAGCGATGAACTAGGTG ATACTGGTGCTTGCCGAGTGGCGGTGTGCTTGTCTGGAGCTATCAGATCA TTCGTGCATCACGCGGTACACGGGTCTATCCAAGGCAATCTCATCGAGGC GATCAAGGCGGATGGCTGCGAAGTAGACGTGTTCGCGTACGCCACACGGA GAGGCATGGTCGGGCAGGGCAAAGAGGTGAGGTGATAATATTTCATTTGC ATGCCATACCAGTCATCACCTTGCTGCTTCCATGGGGTTGCCTTTTTTTA CATGATTTGCAAGGACTTGCTTTCGCGAGTAAAATCGAGCGGACAGGGTG CATTCTTCCCTACAATGCCCAAGTAAGTGACGCAATACAACAGTTTTGTC GACAACCGCGTACATACCACGAGTATTCAAAACCTGGATGTGTCACTGAT ATCGCCATAGGCTTGCCCTGATCCAGCTCCGGCTACCCCCGGGTAACAAT CGTTCCGTGTGCAAGCTACCTCGACCAGCGATTTGACGCCCAAAGCGAAT CTTGTTAATGAAAAAAGCAGGAAACGAACCCCGAATTCACGCCGAATGCC TCTGACATCGAGACCGCACTAGCGGTACTGGCACCGACCAGGCTTATTTG GCACCAAGAGCAGGCAGGGATCATCTCCAACTCCTGCCCAACTGCAACCG GATCATTCGGCCAAAGGGTGTCGGCACCGTCCGGCAGTCATGATGACTAC GGCGCTGTCTCATGGACATGGGAGGTAGGTTCAACACAGCAAAGGCAACA TACAGTAGTGGGTATTTTCCCCATGCCCCACGTCTATCCACATTATTACT ATATAGCCCCCATTTACACATATGTTATGTTTATACCAAGCACCCAACCG CTGATACCAGACCTGTGTAAGAACCACCATCAAGCTTGTTCCGAACCTGA CGTGCCTATCTTCCACACTTTAGATGAGGAGACCCGACTCCAGTGACAAC TTTTACTGGCAATTGTACAAGTCGTTGGCGGCCTACCGCATGGCCCTCAA GGAAGAAAGGCGAAAGGGGCACGGGTTTGTCTACGATTGGATCATACGCG GGCGTTTTGACGTGGCCTGGGTTCGCCCTCTGCCGCCGTTACGGTCATTT CCACGGGAAGCGGTATGGGTTGGCCGTCACTACTGGTGAGGGTGCGGAGA GCGGCCTAGCGTGATCATGCAGATTGATACTGGTACAAGTCTGCGATGCG TTCTAGGGGAGAAGACGGCGGGATGGGGATCGTTCTCGTCATTCCAGCTT GCTAGATCGTTGTGGTCCCAAGACTATGAAGGAAAATGTGACAGACACAA GGGTCGTTGTTGTTGCCGTTACGGTCATTTCCACGGGAAGCGGTATGGGT TGGCCGTCACTGCTGGTGAGCGTGCGGAGAGCGGCCCAGCGTGATCATGC AGATTGATACTGGTACAAGTCTGCGATGCGTTCTAGGGGAGAAGACGGCG GGATGGGGATCGTTCTCGTCATTCCAGCTTGCTAGATCGTTGTGGTCCCA AGACTATGAAGGAAAGTGTGACAGACACAAGGGTCGTTGTTGTTGCAATA TAAGGCCAATTTTTTTGTCGCATGGGGTGTTATGCAATTTTGTTCAGAGC ATTGCACGTTGAACCGTGCGCCTTCGGTAGTAGAATCTCACAAAATCGGA TGTGTTTGATGTTTGCAGCTCCCTAAGAGTGGCGTGCGTTGTTGAATGTT GTAGCTCTCCTTGTTGCTCTTCGAATGGGGCTAGCGCTTTGGGTGGTTAG GGCATTGCGCCGTGCTTTTACCATGACATGATGACGTGAACGATCTCGTC TCCCCTATTTCATTTTTTATTTGCGTGCATCACTCAACAATGCAAGCACA GCAGTATGCCAAATCGCACTGACGACGCGTCCTTTGGCCTGCGCTTATAG AGCCCCTCCCCGTTTTTCCATGCTCCACTCGGTGTAAAGGCCCATCTCAG ATCAGTTCGCGTTGGTACCGCGTGCCTTCTCCGACCAGTTTTTCAAGGCC ATAACGGCCTTCTATGCATGTGATGACCAGTCGTGGCAGCCACCGGCAAC ATGGTGGCAGCCTGGTTGTGGCGGAGGTTTCGAGGAGAGCGTTCTGTTTC GCCACCTCCACGCGCACAACGTGCCGCATCGATATTATTTAATGTTCGAG TACGAAATCGCGCGGGGAGCGCTCGGTGGGATGTGCCAGCTGGGACACGC TATTTTCGGTGAAGCTTGCACCTTGCTCCAGATGGCAGAGGCGTTTCAAT CTCCGCTCAACAGGTGCATGTTCACGCAGATGCTTGCCTTCGGGCTATTC AGGGTTTTCGTGCTGGGTGTGCTCGCGGTCGACGAAATATATCTCGGCCA TAGATGAGGCAACAATAACTTTTACGATTGGTTACAGTAGAGCTAAGAAC CGTGCAAGCAGAAACGTCCAACCTGTAATGAGGAGGGAAGCAACTGTGTA GAACGGCATCGATAGCGAGGTGTATGGGAAGAAAATTGGCTGCGATGATT ATTTCCAATTTTCCTCACGGAACCTCCTACCTCACCTGCGCTACTTACCT TGAAACAGTAAAGAATGTAGCCAGACACTCGCGGAATGGGCAAACCTTCG TTGCCGGACCCTGCTTCCCGCCGTAGGCATGAATGATGCCCGTAGGACGG ACGCCATGCTGAGCTCGGACCCTAGAGCTTGGGAACAGTTGACCAAAGAC TCGTCACCGGAACCGACATCTGGGCGAGAAACCTCAGACACAAAAGGCGG TCCGTTCCCGATCGGGGAAACTCTCCGGTACACCACCGTAGCGACGACGG AAGATATTTACCGCGTGTATTCCAAGCTGGTCGCCCTACGAGATGCTGTG CTGGTGCCCGTGTATTCATCAACTGAGGACAGCACGTTGGTATTCGGGAA CTTTGAAGCTAAGAATTCTAGCCGCTCGAACCGGTGGGACGGCTGGCAGA TGCTGCCCCCCTGGTCGGTGTACTCACTCAGGGATTGTCCCCTTTCGCAG GTGAGAGTACTTTTGGGAGTATTGCGTCGATTATTCAGCAGACTTTCGGT ATTTTTTGCGTGCTCGTCCTTTTTATTGTACATGCTTTCGGGGTGTCCAT GTAGGCTTGCGTTTTGGGGGGAACTTGATCACCTTGTCGGGATGGATGAT AGATGTGGCAAACGTGCGGCTCTTTTAGCGAGCTCGAGTTTCGACCCCGT TTCACGTCCCTGTTGAGACCACGTACGTTGCCCGAGGCCACAACTCCGGC GTTTCTGATGATTTGACGAACGCCCTCCTACCCCCTTGCTCAACGTTGTT AGTGCCACTCAAGTTACCGAAGGGGTGTATCGCCACGTATTTAGAGAAAA CCATGGCTGTCGTGTCGCGAACTCCATTCCAAAGTTTTTCTGAAATCCAA TAGCTGAAATACAGCAGTGAGTGGGGCTCAGCTGGAATATCGAGGAACTT CCATAGACAAAATGATGTGATATCATACACGGAGCAAGTGTCTTCTACTA TTTTCTCGAACAAGATGTTTGGCATTTTCAAAGACAGCGAGGAGAACTCG AGTGCGATCCGGTACCCCCTCCGCTCTATCTACCGCCTTCGCAGTCGCGT TTCCCTGGTGTTTCGCCCCACATCGTTTCGTACTTCACTATGGGGGTTCC CCTCGTGAGGGAGTTGGCGCACGCGTTAGAGTGCTTTGTGCATGGTTTGG TCAAGAAATCTGGGGGAAGTGACGACGACTTCGACGGGAGTTCGTGCGAG GGAACCAGGTAGGTGCCAAGTTAGATGGATGAAAATGTTGACTGGATATG ATGATACTCTCTAGTAGGACAAGAAGATGGAAACCCCAGCAGCGTGAAGC GGCCTCAACCGGTACCCAAAGTGAGGCGCGAAGCAGTTTTGTGCTTTCTA TTATTGTAGTGTTGACACTATCCAAGGACCTTGTACATCCAGCGATTTGG ATACGAATACACCCCAGCGCGGCACAGCACGTCGCTCACCCACCCACCCA CCCATCTACCCACGCGTGCATTTTTGGGCCTTCTTCATTTGACGACCGAT CTGGAAAATGTCATTGTTGGATCTATCTGCGGTTACCGGTCTGGGTCGTC ACGTCTGGCATGCAGACCGCTAGAGGTGGTGATGATCGACGTCGCCCTTC ATACTGAAGAGGTAGGTGCGCGGTTCATACCTGCCGGTAACGTTAAATAC GTTGACGTCGTCAAACTCACTGGTTCAACACACAAAATAACCCACCCCAT CGCTGTCTTTTAGTGTGAAGTTTGCCTGAACTACGGTCGAATTGTAGGTC TGCCTCGTGGCAATACTGAGCATTTACCAGGTGGTGATGATAAACAAGGA ATATACTTTATATTCGCCAGACAATATTTGCTTTGTCGAGCGGGTAGGCT TCCCGTCATTCTCGCTTCTGAAAGGCCTGTGGATACCATGAACAGGGTCA ATGACCTCAGAACTCTAATGCTAGAGCACGGAAGGTAGCCCACATGAACA GGCGCTTCTAACAGTCAGCACTCGGAACGAAACGCATACCCGAGGATACA AATCAGCCCTCCCAACAACTGACTTGTATCCATCTACACGATTCGGTCGT AAACGTTCCACTGCTGTGGTGGCTCGACGCGGCGACCTCGTTCGTGCCTT TGATCCCGAAATACCACACATGCCCCGCCCAACCTTTTTCCTGATCCAGC TCGGCATCTGCACTGCGGACCACGGCCTGGGGTTGAGTGCCGGGGATCAC GTTTGGAGCTTCTTTCGTGAACCGGTCGTTAATTGCAAGGGATACGGCAA CTTGGGAGACGAATGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig17:622518..627433+

>mRNA_P-littoralis_Contig17.141.1 ID=mRNA_P-littoralis_Contig17.141.1|Name=mRNA_P-littoralis_Contig17.141.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1788bp|location=Sequence derived from alignment at P-littoralis_Contig17:622518..627433+ (Pylaiella littoralis U1_48)
ATGCGGCCCAATGTTGGTATCAGTGCGAGCAGCAGCATCGAAGAGCAAAC
AAACCAAAGGCGAATACGGCATGGCTCTGATGAAAGCGATGAACTAGGTG
ATACTGGTGCTTGCCGAGTGGCGGTGTGCTTGTCTGGAGCTATCAGATCA
TTCGTGCATCACGCGGTACACGGGTCTATCCAAGGCAATCTCATCGAGGC
GATCAAGGCGGATGGCTGCGAAGTAGACGTGTTCGCGTACGCCACACGGA
GAGGCATGGTCGGGCAGGGCAAAGAGCAGGAAACGAACCCCGAATTCACG
CCGAATGCCTCTGACATCGAGACCGCACTAGCGGTACTGGCACCGACCAG
GCTTATTTGGCACCAAGAGCAGGCAGGGATCATCTCCAACTCCTGCCCAA
CTGCAACCGGATCATTCGGCCAAAGGGTGTCGGCACCGTCCGGCAGTCAT
GATGACTACGGCGCTGTCTCATGGACATGGGAGATGAGGAGACCCGACTC
CAGTGACAACTTTTACTGGCAATTGTACAAGTCGTTGGCGGCCTACCGCA
TGGCCCTCAAGGAAGAAAGGCGAAAGGGGCACGGGTTTGTCTACGATTGG
ATCATACGCGGGCGTTTTGACGTGGCCTGGGTTCGCCCTCTGCCGCCGTT
ACGGTCATTTCCACGGGAAGCGGTATGGGTTGGCCGTCACTACTGGCCCA
TCTCAGATCAGTTCGCGTTGGTACCGCGTGCCTTCTCCGACCAGTTTTTC
AAGGCCATAACGGCCTTCTATGCATGTGATGACCAGTCGTGGCAGCCACC
GGCAACATGGTGGCAGCCTGGTTGTGGCGGAGGTTTCGAGGAGAGCGTTC
TGTTTCGCCACCTCCACGCGCACAACGTGCCGCATCGATATTATTTAATG
TTCGAGTACGAAATCGCGCGGGGAGCGCTCGGTGGGATGTGCCAGCTGGG
ACACGCTATTTTCGGTGAAGCTTGCACCTTGCTCCAGATGGCAGAGGCGT
TTCAATCTCCGCTCAACAGTAAAGAATGTAGCCAGACACTCGCGGAATGG
GCAAACCTTCGTTGCCGGACCCTGCTTCCCGCCGTAGGCATGAATGATGC
CCGTAGGACGGACGCCATGCTGAGCTCGGACCCTAGAGCTTGGGAACAGT
TGACCAAAGACTCGTCACCGGAACCGACATCTGGGCGAGAAACCTCAGAC
ACAAAAGGCGGTCCGTTCCCGATCGGGGAAACTCTCCGGTACACCACCGT
AGCGACGACGGAAGATATTTACCGCGTGTATTCCAAGCTGGTCGCCCTAC
GAGATGCTGTGCTGGTGCCCGTGTATTCATCAACTGAGGACAGCACGTTG
GTATTCGGGAACTTTGAAGCTAAGAATTCTAGCCGCTCGAACCGGTGGGA
CGGCTGGCAGATGCTGCCCCCCTGGTCGGTGTACTCACTCAGGGATTGTC
CCCTTTCGCAGTCGCGTTTCCCTGGTGTTTCGCCCCACATCGTTTCGTAC
TTCACTATGGGGGTTCCCCTCGTGAGGGAGTTGGCGCACGCGTTAGAGTG
CTTTGTGCATGGTTTGGTCAAGAAATCTGGGGGAAGTGACGACGACTTCG
ACGGGAGTTCGTGCGAGGGAACCAGACCGCTAGAGGTGGTGATGATCGAC
GTCGCCCTTCATACTGAAGAGCTCGGCATCTGCACTGCGGACCACGGCCT
GGGGTTGAGTGCCGGGGATCACGTTTGGAGCTTCTTTCGTGAACCGGTCG
TTAATTGCAAGGGATACGGCAACTTGGGAGACGAATGA
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