mRNA_P-littoralis_Contig17.141.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI) HSP 1 Score: 603 bits (1556), Expect = 2.670e-209 Identity = 308/564 (54.61%), Postives = 378/564 (67.02%), Query Frame = 1
Query: 124 VCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVLAPTRLIWHQEQAGIISNSCPTATGSFGQRVSAPSGSHDDYGAVSWTWEMR-RPDSSDNFYWQLYKSLAAYRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGCGG-GFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKECSQTLAEWANLRCRTLLPAVGMNDARRTDAMLSSDPRAWEQLTKDSSPEPTSGRETSDTKGGPFPIGETLR--------YTTVATTEDIYRVYSKLVALRDAVLVPVYSSTEDSTLVFGNFEAKNSSRSNRWDGWQMLPPWSVYSLRDCPLSQSRFPGVSPHIVSYFTMGVPLVRELAHALECFVHGLVKKSGGSDDDFDGSSCEGTRPLEVVMIDVALHTEELGICTADHGLGLSAGDHVWSFFREPVVNCKGYGNLGDE 1785
+C SGAIRSFVH AVH SI+ NLIE+IKADGCEVDVFAY TR V + K+ E NPEFTPN+SD+E ALAVL PTRL+WHQ+QAGII N C S S H W WE R P++S + YWQLYKSLAAYRMAL+EE+R G GF YDW+IRGR DVAW RPLPPLRSF R+AVW GRHYWP+SD FALVPR FSD+FF A+ FYACD +SW PP++WWQP C GFEESVLFRHLHA +P+R+Y +F++ I RG +GG+C+LG ++ E C+LL + A Q P + C + LAE+++LRCRTL PA GM D RR DA+L +PRAWE L DSSP E P P+G YT+VA ED+ KLV LRDA+ P S E + EAK S +RW GW+ P W ++S+ CPL++ + PG SPH+V Y+TMG PLVREL +++CFV ++ ++ D + SSC G R L++VMIDV+LHTEELGICTAD LGLSA + V FF P +C GYG L E
Sbjct: 1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVE-NPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGVNNRTD--ASRHSARH------LWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLLGLWNALQPPFSRDHCLEALAEYSDLRCRTLFPARGMEDERRVDAILDPEPRAWEALL-DSSPL----LEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAEDVDSARLKLVLLRDALQAP--SPLEPHYEMALREEAKERSLLDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVQSVKCFVSRIIGETQVGGGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASEQVSRFFDNPAAHCAGYGRLDSE 548
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI) HSP 1 Score: 298 bits (763), Expect = 4.440e-85 Identity = 227/672 (33.78%), Postives = 301/672 (44.79%), Query Frame = 1
Query: 112 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVLAPTRLIWHQEQAGIISNSC-PTAT------------GSF-----------GQRVSAPSGSHDDYGAVSWTWEMRRPDS-------SDNFYWQLYKSLAAYRMALKEERRKGHGFV-----------YDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDD---QSWQPPATWWQPGCG-------------------------------GGFE-----------------------ESVLFRHLHAHNVPHRYYLMFEYEI-------------ARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKECSQTLAEWANLRCRTL--LPAVGM-NDARRTDAMLSSDPRAWEQLTKDSSPEPTSGRETSDTKGGPFPIGETLRYTTVATTEDIYRVYSKLVALRDAVLVPVYSSTEDSTLVFGNFEAKN-------SSRSN--RWDGW---------------QMLPPWSVYSLRDCPLSQSRFPGVSPHIVSYFTMGVPLVRELAHALECFVHGLVK-----KSGGSDDDFDGSSCEGTRPLEVVMIDVALHTEELGICTADH 1695
C VAV +SG +RSFV +H S + +++EAIKA+GC VDVF YA+ G E + +IE + L+PT+L+WHQEQAGII NSC PTAT SF G V + S+ G S E +P S S+ FYWQLY+SLAAYR+A++ E K YDWI+ RFDVAW + LP R+F R+ VW WP+S FALVPRAFSD+FF A+ AF+ACDD SW P WWQP CG GGFE ES+++RHLHA VP+R Y MFEY A G C+ + C LL F S+EC+ L+EW++L CRT L A G + R L D W + + P+ ET G E R ED+ R + L ALRDAV+V +E+ ++ G+ A +SR N + DG Q WSV+S C L++ +PG +PHI+ + + +RELA A +C H ++ S D FD + C +R LE+VMIDV+LH+ E+ H
Sbjct: 39 CAVAVSISGDVRSFVDPVLHRSFRRHVVEAIKAEGCTVDVFVYASL------GDEDLLVEQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDNRSNQPRGHASK--EPSKPPSREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEHGQENGNSSGNVHSGGNLHHSPRSGPAGGGGGFELRGSDDGSIFHDNRGGGRGEGFGESIVYRHLHASGVPYRPYPMFEYYTVPPYVRDGDADGDAAGDTRSGCETSTPDYFTGCVLLGTVGLFSQAYTSEECATALSEWSSLHCRTSTHLEATGPGHQTERGSENLDPDLTTWPRSSVGVYPD-----ETETDNGDVLGAAEADR----VQEEDLRRAWFNLAALRDAVIVAADDGSEE--VMHGSSNAGEEDTPSGETSRRNLGKEDGGDHDAAPKPSGSSPTRQTNRSWSVHSQGGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFIEGATAWSSVNEDFGFDATVCASSRSLELVMIDVSLHSAEVQAMEVTH 689
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE) HSP 1 Score: 224 bits (571), Expect = 3.250e-61 Identity = 180/536 (33.58%), Postives = 231/536 (43.10%), Query Frame = 1
Query: 112 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVLAPTRLIWHQEQAGIISNSC-PTAT------------GSF-----------GQRVSAPSGSHDDYGAVSWTWEMRRPDS-------SDNFYWQLYKSLAAYRMALKEERRKGHGFV-----------YDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDD---QSWQPPATWWQPGCGG------------------------------------------------------GFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKECSQTLAEWANLRCRTLLPAVGMNDARRTDAMLSSDPRAWEQL--TKDSSPEPTS-GRETSDTKGGPFPIGETLRYTTVATT----------------------EDIYRVYSKLVALRDAVLVPVYSSTEDST 1347
C VAV +SG +RSFV VH S Q +++EAIKA+GC VDVF YA+ G E + +IE + L+PT+L+WHQEQAGII NSC PTAT SF G V + S+ G VS E +P S+ FYWQLY+SLAAYR+A++ E K YDWI+ RFDVAW +P LR+F R+ VW WP+S FALVPRAFSD+FF A+ AF+ACDD SW P WWQP CG GF ES+++RHLHA VP+R Y MFEY A+ + G G A EA S L LL VG+ T ++ W L + PE TS GR+T P + ++V + ED+ R +S LVALRDAV++ +E++T
Sbjct: 38 CAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASL------GDEDLLEEQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSK--EPSKPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEYY----AVPPYVRDGDVDGGAARDTRSGCEASTSDY--------------LTGCVLLGTVGLFSPAYTSEACATALSEWSSLHCRASTQPEATSTGRQTERASKNLNPYLKAWPRSSVGVSSGEAKTHRGDVFGTAEEDRVQEEDLKRAWSNLVALRDAVILAADDDSEEAT 547
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A7S2WLT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLT0_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 7.920e-18 Identity = 106/335 (31.64%), Postives = 143/335 (42.69%), Query Frame = 1
Query: 112 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVL--------APTRLIWHQEQA----GIISNSCPTATGSFGQRVSAPSGSHDDYGAVSWTWEMRRPDSSDNFYWQLYKSLAA-YRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGC---GGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKE-CSQTLAEWANLRC 1065
CRVAVC+SG R+F H V + NL+ A++ CEVD+F V G+ E T S E L VL + RL+ E G S P TG+ + A G S + S+ W +S+++ + L+EER + Y W+IR RFD++++ PLPPL S R+AV V PISD FA+VPRA+ D +F A D W+ W+ G G E VL L A P + + + I R CQ G F C L+ A NS E CS +LA L C
Sbjct: 476 CRVAVCMSGQWRTFAHPLVRQTFHQNLLGALETS-CEVDLFLCIKPSDQVA-GRRNEHFSRTTAAPSTREAILEVLRAELPDVLSRVRLVLADEPLPQSNGQTSALYPLDTGTSFPKACANGGGD----CCSRSQPSAEVQSALAAAWPSLESVSSCLDLVLREERLRQQD--YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMA-------SDLCWRGACHRWRARDFPKGAGSTELVLLAALRAAEAPVQLH-DWPLSIVRAPPDSPCQ-GLPQFQIPCALMTAVGAVH--WNSVEACSASLATPLLLLC 791
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A7S2WMN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN0_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.940e-10 Identity = 63/176 (35.80%), Postives = 82/176 (46.59%), Query Frame = 1
Query: 550 MALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGC---GGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFGEACTLLQMAEAFQSPLNSKE-CSQTLAEWANLRC 1065
+ L+EER + Y W+IR RFD++++ PLPPL S R+AV V PISD FA+VPRA+ D +F A D W+ W+ G G E VL L A P + + + I R CQ G F C L+ A NS E CS +LA L C
Sbjct: 9 LVLREERLRQQD--YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMA-------SDLCWRGACHRWRARDFPKGAGSTELVLLAALRAAEAPVQLH-DWPLSIVRAPPDSPCQ-GLPQFQIPCALMTAVGAVH--WNSVEACSASLATPLLLLC 171
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A0D2W0T8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2W0T8_CAPO3) HSP 1 Score: 65.5 bits (158), Expect = 1.090e-7 Identity = 52/176 (29.55%), Postives = 73/176 (41.48%), Query Frame = 1
Query: 520 QLYKSLAAYRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGCGGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMC--QLGHAIFGEACTLLQMAEAFQSPLNSKECSQTL 1041
Q L +Y +AL E + G F DWI+R R DV + PLP L S G +S+QFA+VPR FSD F + PP + C + L L A+N+P+ + + I R G C G G C L ++ EA + + S+ L
Sbjct: 197 QSLSILDSYSLALDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEHQLSNQFAIVPRKFSDVFLRL-------------PPV---EIECAANNDNDRLRLWLDANNIPYYRHKAIHFTIVRAYYGAECFRSCGGFGVGSQCELRKVCEAMFGEITNDRKSKKL 354
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: UPI0001FE4FEA (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE4FEA) HSP 1 Score: 65.5 bits (158), Expect = 2.270e-7 Identity = 52/176 (29.55%), Postives = 73/176 (41.48%), Query Frame = 1
Query: 520 QLYKSLAAYRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGCGGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMC--QLGHAIFGEACTLLQMAEAFQSPLNSKECSQTL 1041
Q L +Y +AL E + G F DWI+R R DV + PLP L S G +S+QFA+VPR FSD F + PP + C + L L A+N+P+ + + I R G C G G C L ++ EA + + S+ L
Sbjct: 197 QSLSILDSYSLALDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEHQLSNQFAIVPRKFSDVFLRL-------------PPV---EIECAANNDNDRLRLWLDANNIPYYRHKAIHFTIVRAYYGAECFRSCGGFGVGSQCELRKVCEAMFGEITNDRKSKKL 354
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Match: A0A0D2US65_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2US65_CAPO3) HSP 1 Score: 61.2 bits (147), Expect = 2.600e-6 Identity = 87/353 (24.65%), Postives = 133/353 (37.68%), Query Frame = 1
Query: 121 AVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCEVDVFAYATRRGMVGQGKEQETNPEFTPNASDIETALAVLAPTR----LIWHQEQAGIISNSCPTATGSFGQRVSAPSGSHDDYGAVSWTWEMRRPDSSDNFYWQLYKSLAAYRMALKEERRKGHGFVYDWIIRGRFDVAWVRPLPPLRSFPREAVWVGRHYWPISDQFALVPRAFSDQFFKAITAFYACDDQSWQPPATWWQPGCGGGFEESVLFRHLHAHNVPHRYYLMFEYEIARGALGGMCQLGHAIFG--EACTLLQMAEA-FQSPLNSKECSQTLAEWANLRCRTLLPAVGMNDARRTDAMLSSDPRAWEQLTK 1158
AV SG +RSF + A+ S++ NL+ A+ G + +F+ + G + E D+ AL L P + ++W Q V P +H+ RP Q L +Y + L E + G F DWI+R R DV + PLP L S G + +S+QFALVPR +SD FF+ PP + C + L L +N P+ + + I R G C FG C L ++ EA F N ++ + A+ +T P G + + + A + R + TK
Sbjct: 101 AVAFSGTMRSFKYPALLDSLRNNLLAAL---GGTILIFSNSRLEDWPRSGLGCANSQE------DLFDALRDLLPGKAEHFVVWRSFQ------------------VPDPMWTHNC---------ASRPSLI-----QSLSVLDSYSLVLDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEYQLSNQFALVPRKYSDVFFQL-------------PPR---EIECAVENDNDRLRLWLDTNNTPYYRHKAIHFTIVRAYYGAECFRSCNGFGVGSQCELRKVCEAMFGEITNDRKSKKVDAQLLISELKT--PHAGCSVSLSSPAPVHLKERKFRSRTK 392 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.141.1 >prot_P-littoralis_Contig17.141.1 ID=prot_P-littoralis_Contig17.141.1|Name=mRNA_P-littoralis_Contig17.141.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=596bp MRPNVGISASSSIEEQTNQRRIRHGSDESDELGDTGACRVAVCLSGAIRSback to top mRNA from alignment at P-littoralis_Contig17:622518..627433+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.141.1 ID=mRNA_P-littoralis_Contig17.141.1|Name=mRNA_P-littoralis_Contig17.141.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4916bp|location=Sequence derived from alignment at P-littoralis_Contig17:622518..627433+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:622518..627433+ >mRNA_P-littoralis_Contig17.141.1 ID=mRNA_P-littoralis_Contig17.141.1|Name=mRNA_P-littoralis_Contig17.141.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1788bp|location=Sequence derived from alignment at P-littoralis_Contig17:622518..627433+ (Pylaiella littoralis U1_48)back to top |