mRNA_P-littoralis_Contig1025.30.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1025.30.1
Unique NamemRNA_P-littoralis_Contig1025.30.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 3.490e-115
Identity = 202/328 (61.59%), Postives = 230/328 (70.12%), Query Frame = 1
Query:  115 LAKFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVVG-IDMERVRQELEALQREGDXXXXXXXXXXXXXXXXXXXGVRDP--------EDAANSRA-RPQRQP------RESFIPMPGSD-EGEAEILRRHLEEMTGYRGSGGSDPPTMRYPEREEALRETTPWLRSMCFPALFPEGVGDPSGPRVREARDVDIITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNP 1047
            +AKFS  N  +P PVP+ LR LTMS+E++ISMAFPVCKV RLAGGAHGYKGHV+SIGQ+IG FV TLPWLPNSDEMPVIIIQPP GGSWAGR+FKVSL RV+RALNYL+LH PPY D+   IDM+RVR+ L+   RE                     G  D         E A + R   P   P      ++SFIPMPG   + EAEILR+ LE MT Y  +G S   TM+YP RE  LRE TPWL SMCFP LFP+GVGD S P  R   DVDI+THLMKFVDRPEGEA +YRFASHRTFRYWALD+RLR  AR +CR+FLRNNP
Sbjct:    4 VAKFSVENGTVPNPVPDELRSLTMSEEMMISMAFPVCKVIRLAGGAHGYKGHVLSIGQDIGGFVGTLPWLPNSDEMPVIIIQPPDGGSWAGRQFKVSLERVQRALNYLMLHSPPYMDIRSRIDMDRVRRHLQDEPREDGGEIDVMRLFHTVTEEPPNPGGGDGXXXXEGNGEGARDYRGIEPMPDPVEHEERQQSFIPMPGDGRQSEAEILRQQLEHMTNYTDNGQSGAATMQYPGREAPLREDTPWLWSMCFPTLFPDGVGDTSQPHQRTLTDVDIVTHLMKFVDRPEGEAPYYRFASHRTFRYWALDMRLRKTARLRCRIFLRNNP 331          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 6.400e-96
Identity = 143/173 (82.66%), Postives = 158/173 (91.33%), Query Frame = 2
Query: 1046 LTSLDPSEINDDNIAQLMSIATRYVANVAGTDGFWSKWEGKLEDTVDQLASLPASTTYSAADHHLADLYRLMPRYGPEPEAGVGQGNVRPIQERNRLLIANPHIADWWVWERMDVFKKYFLGPEMADATWSWDRAEWRSRSSLHVHGCSSWACEGDERLTELARTYLKGHIGR 1564
            LTSLDPSE+NDD I QLMS+ATRYVANV GTDG+W KWEGKLEDT+DQL SL   TTYSAADHH+ADLYRLMPR GPEPEAGVG G+VRPIQERNRLLIANPHI DWW+WERM VFKKYFLG +MA+A+W WDRAEW+SRS+LHVHGCSSW CEG+ER+TELARTYL+GHIGR
Sbjct:   21 LTSLDPSEVNDDTIRQLMSVATRYVANVPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMPRAGPEPEAGVGAGDVRPIQERNRLLIANPHIEDWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGR 193          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: A0A6H5KCP2_9PHAE (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP2_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 3.190e-93
Identity = 187/395 (47.34%), Postives = 221/395 (55.95%), Query Frame = 1
Query:    1 YRTMFCTTCHEAWPCKNPPPGGGSVYQCGRSVSS--------SFVLLAKFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVVG-IDMERVRQELEALQREGDXXXXXXXXXXXXXXXXXXXG------------------------------------VRDPEDAANSRARPQRQPRESFIPMPGSD-EGEAEILRRHLEEMTGYRGSGGSDPPTMRYPEREEALRETTPWLRSMCFPALFPEGVGDPSGPRVREARDVDIITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNP 1047
            YRTMF  TCHEA P   PP  G + Y C R            S   +AKFS  N M+P PVP+ LR LTMS+E++ISMAFPVCKV RLAGGAHG      ++   + R  R     P + +  +       GGS    + +     V+RALNYL+LH PPY D+   IDM+RVR+ L+   RE                     G                                    VRDPEDA+   ARPQR P ESFIPMPG   + EAEILR+ LE MT Y  +  S   TM+YP +E  LRE TPWL SMCFP LFP+GVGD S P  R   DVDI+THLMKFVDRPEGEA +YRFASHRTFRYW++D+RLR  AR QCR+FLRNNP
Sbjct:  234 YRTMFRMTCHEASPVAKPPSNGSTEYVCSRCADDLRHIRRHPSMPRVAKFSVENGMVPNPVPDELRSLTMSEEMMISMAFPVCKVIRLAGGAHGD----FAVASKLRRDARHHH--PGTRQRKL-------GGSAIQGQPRA----VQRALNYLMLHSPPYMDIRSRIDMDRVRRHLQDEPREDGGEIDVMRLFHTVTEEPPNPGGGDGXXXXEGNGEGARDYRGIEPMPDPLEHEDEGDNVRDPEDASGLAARPQRGPAESFIPMPGDGRQSEAEILRQQLEHMTNYTDNEQSGAATMQYPGQEAPLREDTPWLWSMCFPTLFPDGVGDTSQPHQRTLTDVDIVTHLMKFVDRPEGEAPYYRFASHRTFRYWSVDMRLRKTARLQCRIFLRNNP 611          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 5.650e-93
Identity = 185/414 (44.69%), Postives = 227/414 (54.83%), Query Frame = 1
Query:    1 YRTMFCTTCHEAWPC------KNPPPGGGSVYQCGRSVSS--------SFVLLAKFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVVGIDMERVRQELEALQREGDXXXXXXXXXXXXXXXXXXX-------------------------------------GVR-------------DPEDAANSRARPQRQPRESFIPMPG-SDEGEAEILRRHLEEMTGYRGSGGSDPPTMRYPEREEALRETTPWLRSMCFPALFPEGVGDPSGPR-VREARDVDIITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNN 1044
            YR + C TCHE WP       + P   G    Q  R  +         S   +AKF   N  +P PVP  ++ LTM++E++I+ A PV KV RLAGG HGY+GHV+S+GQ+IG F   LPWLP S+E+PV+I+QPP GGSWAGR FKV+L RVE AL YLI H P YR +V IDM R+R+ L  L+R+ +                  X                                     GV              DPE A+  RARP+R P ESF+       + E + LR  L ++TGYRG    +  +  YP R   +RE TPWL SMCFP LFP+GVGDP G   +R    V  I HLMKFVDRPEG A HYRFASHRTFRYWALD+RLR  A+ QCRVFLRN+
Sbjct:   56 YRPVNCPTCHEQWPTDRTLPEETPERNGVPEIQSMRCSNDLVERRRQPSLPQVAKFGEVNRTVPPPVPGYMQNLTMTEEMLIARASPVVKVVRLAGGMHGYEGHVLSMGQDIGEFATRLPWLPTSEEIPVVIVQPPEGGSWAGRNFKVNLARVEGALLYLIRHSPAYRGIVHIDMARLRERLGGLERDENVDVDVMHLFHTITDDNAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRRPRSRVCGVEIAPNLLELDDIADDPEGASELRARPRRGPTESFVKSANVRQQSEEDALREALMDITGYRGDAAGEA-SFEYPRRTGPVREDTPWLGSMCFPTLFPKGVGDPFGDAGMRSVSFVHFIAHLMKFVDRPEGRAPHYRFASHRTFRYWALDVRLRRQAKQQCRVFLRNH 468          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: A0A6H5K2R2_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R2_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.690e-60
Identity = 132/346 (38.15%), Postives = 175/346 (50.58%), Query Frame = 1
Query:  121 KFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVVGIDMERVRQELEALQREGDXXXXXXXXXXXXXXXXXXX-----------------------------------GVRDPEDAANSRARPQRQPRESFIPMPGSDEGEAEILRRHLEEMTGYRGSGGSDPPTMRYPEREEALRE-TTPWLRSMCFPALFPEGVGDP-SGPRVREARDVDIITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNP 1047
            KF +GN M+P  +   L GLT+ ++ +ISMA P+ + +RL GG   Y GH++++ +++  F  +LPW  NSD++P+I+I PP GG+W GREFK     VE ALN+LI + P Y  V  ID+E     L+ L RE D                                                       V DP  AA  R      PRESFIP  G+ E   E   R   E    R  GG     + +P + + L E  TP+L + CFP LFP G  DP SG R R    VD +THL+KFVD  E E +HYRF SHR F YW +D ++R+ AR QCR+F+ NNP
Sbjct:   25 KFGSGNSMIPDDLVPQLMGLTVLEQQLISMAHPIARAYRLPGGQCAYSGHILNVARDVTTFATSLPWQANSDDIPIIVIVPPGGGTWQGREFKALKNCVEIALNWLIANNPAYSSV-RIDIEN----LDRLGRENDDTEHDHVNNFLRLRKAGPPHGAGXXXXXXXXXXXXXTRRDYRYIGAPFPARPDDDVTDPLQAAGGRTT-SNTPRESFIPTDGTGETPQEDEVRACLERLAARRDGGDASARVHHPRQLDPLPEHQTPFLATKCFPCLFPRGAADPTSGARRRGVDFVDHVTHLLKFVDAVEEERYHYRFVSHRLFAYWCMDTKVRSQARTQCRMFMNNNP 364          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: UPI00109BE5C8 (uncharacterized protein LOC110237019 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE5C8)

HSP 1 Score: 156 bits (394), Expect = 1.020e-36
Identity = 108/357 (30.25%), Postives = 166/357 (46.50%), Query Frame = 1
Query:    1 YRTMFCTTCHEAWPCKNPPPGGGSVYQCGRSVSSSFVLLAKFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVV-------GIDMERVRQELEALQREGDXXXXXXXXXXXXXXXXXXXGVRDPEDAANSRARPQRQPRESFIPMPGSDEGEAEILRRHLEEMTGYRGSGGSDPPTMRYPEREEALRETTPWLRSMCFPALFPEGVGDPSGPR-VREARDVDIITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNP 1047
            Y    C  CHEAWP K+ P     VY C R +        KFS  N+M+P PVP  L+GL+  +E++I+ A P+ +V+   GG  GY GH +++ QNI     +LP  P   ++ VII++   G + + ++  V   +V  AL +LI + P Y DV         +    V  +L  ++ E +                        ++    R   +     SF+P+    E E E +R+ L          G +P +    E +      TP+L +M FP LFP+G GDP+    +R+   +D + HL+KF +   G+   YRFASH  F YWA ++  R     Q  +FL+ NP
Sbjct:  589 YFVFKCNVCHEAWPLKSKPRKP-DVYVCSRCLRDKK-SPKKFSVENEMIPSPVPPQLQGLSQVEEMLIARALPIMRVYIKPGGQRGYSGHCINLPQNIKELALSLPRYPK--DLSVIIVKV-KGRNDSYKDVNVRRQKVTDALTWLIQNNPHYSDVQIDCIALNTLPENAVPSDLLTVETEDEFVSDNNEPDLGPPT----------DNPCEDRVYNESNDMNSFLPVSQQQEQEVEAVRQQLS---------GDEPMSWPNVEDQPLNEYQTPFLATMAFPTLFPDGKGDPTNQALIRDVTLLDRVRHLIKFAESINGKWV-YRFASHPRFSYWAFNMIQRKRTLEQTGIFLKQNP 920          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: A0A6S7H9A2_PARCT (Helitron_like_N domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H9A2_PARCT)

HSP 1 Score: 152 bits (383), Expect = 1.090e-35
Identity = 114/358 (31.84%), Postives = 172/358 (48.04%), Query Frame = 1
Query:    1 YRTMFCTTCHEAWPCKNPPPGGGSVYQCGRSVSSSFVLLAKFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVVGIDMERVRQELEALQREGDXXXXXXXXXXXXXXXXXXXGVRDPED----AANSRARPQRQPRESFIPMPGSDEGEAEILRRHLEEMTGYRGSGGSDPPTMRYPEREEALRE-TTPWLRSMCFPALFPEGVGDPSGPRVREARDVDI---ITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNPD 1050
            Y  + C  CHEAWP    P    +     R  S    +  KFS+ N M+P  +P  L+GLT  +E++I+ A P+ +V+   GG  GY GH +++ Q +    ++LP  P++  +P+II+    G     ++  V   +VE+AL +LI H P Y  V  ID       LEAL   G                    GV D  D    A+            SF+P+P +D  E++ ++  L            D PT+     ++ L E TTP+L ++ FP LFP+G GDP+ P ++  RD+     I HL+K+ ++   +   YRFA H  F YWAL++  R  A  Q  +FL+ NPD
Sbjct:  176 YFVIQCCVCHEAWPLTTKPRSCNTNTYIRRRCSVDKQIPKKFSSENSMIPTVLPTELKGLTQIEEMLIARALPIMRVYVKPGGQRGYSGHCINLPQKVSELAQSLPRCPSN--IPIIIVTM-KGKDNTMKDVIVRRKKVEQALYWLIRHNPQYSSVC-IDSNT----LEALPDNG-----IPCNIQRIETLGDPDGV-DSNDTDTIASGDEVYNGETDTNSFLPLPKNDHLESDAIKSSLNVTK-------IDWPTIE----DQPLNEYTTPFLATLAFPTLFPDGNGDPTNPCLQ--RDIPFANRIQHLIKYSEKI-NDKWIYRFAGHPRFSYWALNMIQRKRALQQNAIFLKQNPD 505          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: A0A2B4S669_STYPI (ATP-dependent DNA helicase n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S669_STYPI)

HSP 1 Score: 144 bits (364), Expect = 7.330e-33
Identity = 110/359 (30.64%), Postives = 170/359 (47.35%), Query Frame = 1
Query:    1 YRTMFCTTCHEAWPCKNPPPGGGSVYQCGRSVSSSFVLLAKFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVVGIDMERVRQE-LEALQREG---DXXXXXXXXXXXXXXXXXXXGVRDPEDAANSRARPQRQPRESFIPMPGSDEGEAEILRRHLEEMTGYRG--SGGSDPPTMRYPEREEALRE-TTPWLRSMCFPALFPEGVGDPSGPRVREARDVDI---ITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNP 1047
            Y    CT C EAWP K+ P      YQC R +        KFS  NDM+P  VP  L+GLT  +E++I+ A PV +V+   GG  GY GH +++ Q+I     +LP  P   ++ VI+++   G   + ++  V    V  AL +L+ +   Y+D+       + Q  L +L   G                       G ++ +D   +          SF+P+P   + E E +R+ L   + +    + GS+P           L E  TP+L +M FP LFP+G GDP+ P +R  RD+ +   + HL+KF +  + +   YRFA+H  F YWAL++  R     Q  +FL+ NP
Sbjct:  509 YSVCQCTVCFEAWPLKSSPRKVDH-YQCQRCIRDKQ-QPKKFSKENDMVPSLVPLQLQGLTQVEEMLIARALPVMRVYIKPGGQRGYSGHCINLPQDIAELAHSLPRYPK--DLSVIVVKM-KGKENSFKDVTVRRQNVADALQWLVNNNSHYKDIT------INQNSLNSLPEHGVPHGLLSVETENIDLDATCEPDLGPQNEDDIVYNEGTEMS----SFLPIPECQQQEIEAVRQQLSNDSNHLPWPTVGSEP-----------LNEYVTPYLATMAFPTLFPDGKGDPTNPSLR--RDIPLGERVKHLLKFGEN-KNDKWVYRFATHPRFGYWALNMIQRKRILQQTGMFLKQNP 838          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: UPI001CF4DE45 (uncharacterized protein LOC114960596 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4DE45)

HSP 1 Score: 142 bits (358), Expect = 4.100e-32
Identity = 114/350 (32.57%), Postives = 162/350 (46.29%), Query Frame = 1
Query:   16 CTTCHEAWPCKNPPPGGGSVYQCGRSVSSSFVLLAKFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVVGIDMERVRQELEALQREG-DXXXXXXXXXXXXXXXXXXXGVRDPED-AANSRARPQRQPRESFIPMPGSDEGEAEILRRHLEEMTGYRGSGGSDPPTMRYPEREEALRE-TTPWLRSMCFPALFPEGVGDPSGPRVREARDVDI---ITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNP 1047
            C  C EAWP K+ P    S Y C R  S       KFS  N M+P PVP  L+GLT ++E++I+ A P+ +V+   GG  GY GH +++ QNI     +LP  P   ++ VII+    G     ++  V   +V  AL +L ++ P Y+DV     E   Q LE L   G                      V  P D  +      +     S +P          +  +H +E+   +       P      ++E L E  TP+L +M FPALFP+G GDP+   +R  RDV     I HL+KF +  +G+   YRFASH  F YWAL++  R     Q  +FL+ NP
Sbjct:  446 CIICQEAWPLKSKPRSPDS-YVCSR-CSRDKKSPNKFSKENSMIPCPVPPQLQGLTQTEEMLIARALPLMRVYIKPGGQRGYSGHCINLPQNINDLASSLPRYPK--DLSVIIVSV-KGKDNTFKDVNVRRQKVLDALLWLRVNNPLYKDV-----EINVQALEYLPINGIPSDLLTVETSDYISDEVVEPDVGPPTDNPSEDVVYDESTETSSLLP----------VGEQHKQELDAIKDQLSGKQPVPWPTLQDEPLNEYQTPYLATMAFPALFPDGKGDPTNQALR--RDVPFAERIKHLIKFAENIDGKWV-YRFASHPRFSYWALNMIQRQRTLQQTGIFLKQNP 772          
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Match: UPI0009E5528F (LOW QUALITY PROTEIN: uncharacterized protein LOC110054639 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5528F)

HSP 1 Score: 138 bits (348), Expect = 7.940e-31
Identity = 105/362 (29.01%), Postives = 171/362 (47.24%), Query Frame = 1
Query:    1 YRTMFCTTCHEAWPC-KNPPPGGGSVYQCGRSVSSSFVLLAKFSAGNDMMPGPVPEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVRTLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPYRDVVG-------IDMERVRQELEALQREGDXXXXXXXXXXXXXXXXXXXGVRDPEDAANSRARPQRQPRESFIPMPGSDEGEAEILRRHLEEMTGYRGSGGSDPPTMRYP--EREEALRETTPWLRSMCFPALFPEGVGDPSGPRVREARDVDI---ITHLMKFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNP 1047
            Y    CT C EAWP  +       S Y+C R          KFS  N+++P  VP  L+GLT  +E++I+ A P+ +V+   GG  GY GH +++ Q+I     +LP  P  +++ VI+++   G   + ++  V    V  AL++LI + P Y+ V         +    V  +L  ++RE                     G ++ ED   +    ++    SF+P+P  ++ E + +++ L        S       M +P  + E     TTP+L +M FP LFP+G GDP+ P +   RD+ +   I HL+K+ +R + +   YRFASH  F YWA ++  R     Q  +F + NP
Sbjct:  230 YLIKQCTVCMEAWPSVQKRQSHTASDYKCSRCTRDKN-HSKKFSKENNIIPSAVPCQLQGLTQVEEMLIARALPIMRVYVKPGGQKGYSGHCINLPQHIEELACSLPRYP--EDLSVIVVRM-KGKENSFKDITVRKKNVAEALDWLINNNPHYKGVKVNQHSLNCLPEHGVPHDLALVEREDTDNETSEPDF----------GFQNTEDTVYN----EQTEIHSFLPIPQCEQQEIQAIQQKL--------SSTHSTQAMSWPTVDNEPINEYTTPFLATMAFPTLFPDGKGDPTNPSLY--RDIPLGEKIKHLLKYAERKD-DRWIYRFASHPRFAYWAFNMIERKRILQQTAIFFKQNP 562          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1025.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFJ0_9PHAE3.490e-11561.59ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KIQ7_9PHAE6.400e-9682.66ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KCP2_9PHAE3.190e-9347.34Helitron_like_N domain-containing protein (Fragmen... [more]
A0A6H5K692_9PHAE5.650e-9344.69ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K2R2_9PHAE1.690e-6038.15Helitron_like_N domain-containing protein n=1 Tax=... [more]
UPI00109BE5C81.020e-3630.25uncharacterized protein LOC110237019 n=1 Tax=Exaip... [more]
A0A6S7H9A2_PARCT1.090e-3531.84Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A2B4S669_STYPI7.330e-3330.64ATP-dependent DNA helicase n=2 Tax=Stylophora pist... [more]
UPI001CF4DE454.100e-3232.57uncharacterized protein LOC114960596 n=1 Tax=Acrop... [more]
UPI0009E5528F7.940e-3129.01LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1025contigP-littoralis_Contig1025:72203..74065 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog400682.PAC_15725762
PFAMsHelitron_like_N
Model size1564
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.42e-30
EggNOG OGs2CC8B@1|root,2S3BW@2759|Eukaryota,3A3QP@33154|Opisthokonta,3C1YH@33208|Metazoa
Cds size1044
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789363.7169793-UTR-P-littoralis_Contig1025:72202..722111680789363.7169793-UTR-P-littoralis_Contig1025:72202..72211Pylaiella littoralis U1_48UTRP-littoralis_Contig1025 72203..72211 +
1680789363.7679214-UTR-P-littoralis_Contig1025:73554..740651680789363.7679214-UTR-P-littoralis_Contig1025:73554..74065Pylaiella littoralis U1_48UTRP-littoralis_Contig1025 73555..74065 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789363.7287316-CDS-P-littoralis_Contig1025:72211..723171680789363.7287316-CDS-P-littoralis_Contig1025:72211..72317Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 72212..72317 +
1680789363.7431927-CDS-P-littoralis_Contig1025:72484..729241680789363.7431927-CDS-P-littoralis_Contig1025:72484..72924Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 72485..72924 +
1680789363.7541683-CDS-P-littoralis_Contig1025:73056..735541680789363.7541683-CDS-P-littoralis_Contig1025:73056..73554Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 73057..73554 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1025.30.1prot_P-littoralis_Contig1025.30.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1025 72212..73554 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1025.30.1

>prot_P-littoralis_Contig1025.30.1 ID=prot_P-littoralis_Contig1025.30.1|Name=mRNA_P-littoralis_Contig1025.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=348bp
MFCTTCHEAWPCKNPPPGGGSVYQCGRSVSSSFVLLAKFSAGNDMMPGPV
PEALRGLTMSQEIVISMAFPVCKVFRLAGGAHGYKGHVMSIGQNIGRFVR
TLPWLPNSDEMPVIIIQPPSGGSWAGREFKVSLTRVERALNYLILHCPPY
RDVVGIDMERVRQELEALQREGDGDEVDVMGLDEDEDEDGDGGVRDPEDA
ANSRARPQRQPRESFIPMPGSDEGEAEILRRHLEEMTGYRGSGGSDPPTM
RYPEREEALRETTPWLRSMCFPALFPEGVGDPSGPRVREARDVDIITHLM
KFVDRPEGEAHHYRFASHRTFRYWALDLRLRNGARGQCRVFLRNNPD*
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mRNA from alignment at P-littoralis_Contig1025:72203..74065+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1025.30.1 ID=mRNA_P-littoralis_Contig1025.30.1|Name=mRNA_P-littoralis_Contig1025.30.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1863bp|location=Sequence derived from alignment at P-littoralis_Contig1025:72203..74065+ (Pylaiella littoralis U1_48)
TACAGGACCATGTTTTGCACCACCTGCCACGAGGCCTGGCCTTGCAAAAA CCCACCACCTGGCGGTGGGAGCGTGTACCAGTGCGGGAGGTCAGTGTCTT CGTCGTTCGTTCTGTGTCGGACAGGTCATAATTTGTCTTTCCCATCGCCA ACATCTCGTGGCTCACCTCGACTTGTTCGTTTGTTCGTTATCCTCTGATT TCCACACCTGCCGTCGAACCAAATCCCAACAGGTGCGCCCAAGATCTGCG TGATATTTTCCGCCATCCTCACCTGCCACAAGTGGCGAAGTTCAGCGCCG GCAACGACATGATGCCTGGCCCCGTGCCTGAGGCCCTGCGAGGTCTCACG ATGTCACAGGAGATTGTGATATCCATGGCATTTCCCGTGTGCAAGGTGTT TCGGCTCGCCGGCGGCGCCCACGGCTACAAGGGACACGTTATGAGCATTG GGCAGAACATAGGGCGCTTCGTGAGGACTCTTCCGTGGCTTCCCAACTCG GACGAGATGCCCGTCATCATCATTCAGCCTCCCAGCGGCGGCAGTTGGGC AGGGCGCGAGTTTAAGGTCAGCCTCACGAGGGTGGAGCGGGCTCTGAACT ACCTCATCCTCCACTGCCCCCCGTACAGGGATGTAGTCGGCATCGACATG GAACGAGTTCGACAGGAATTGGAAGCACTGCAACGTGAGGGGGACGGCGA CGAGGTCGACGTCATGGGCCTTGTCCGAACGATAACGGAAGATTCTACGT CGTCAGAGAACGCCGATGGTGGGGAGGAAAAAGAAAGCAATGGGGACGGG CGCTCGGAGGGTCGAGATTACCGAGGCGTGGAACCCATGCCCAACCCCCT AGAGGACGAGGACGAGGACGAGGATGGCGATGGCGGCGTGCGAGACCCAG AGGATGCAGCGAATTCACGGGCTCGTCCTCAACGACAACCGAGGGAGTCC TTCATCCCCATGCCCGGCAGCGACGAAGGCGAGGCCGAAATTTTGCGACG GCACTTGGAGGAGATGACGGGGTACAGGGGGAGCGGAGGAAGCGATCCAC CTACTATGCGATACCCAGAGCGGGAGGAGGCGCTGCGAGAAACTACGCCC TGGCTTCGGAGCATGTGCTTCCCGGCCCTTTTCCCCGAAGGTGTCGGTGA TCCTTCCGGACCTCGAGTGAGGGAGGCCAGGGACGTCGATATCATCACCC ACCTCATGAAGTTCGTGGATCGGCCGGAAGGAGAGGCACATCACTACCGT TTCGCGAGCCACCGAACCTTTCGCTACTGGGCGCTAGACTTGCGGCTAAG GAACGGGGCTCGGGGGCAGTGCCGTGTTTTCCTCAGGAACAACCCTGACT AGCCTCGACCCCAGCGAGATCAACGACGACAACATCGCGCAGCTGATGAG TATCGCGACGCGCTACGTCGCGAACGTCGCGGGGACTGATGGGTTTTGGA GTAAGTGGGAGGGCAAGTTGGAAGATACTGTGGATCAGCTGGCTTCTTTG CCCGCGTCTACCACGTACTCCGCCGCCGATCATCACCTGGCCGACCTGTA TCGTCTCATGCCGAGGTATGGGCCGGAGCCGGAGGCCGGCGTCGGCCAAG GGAACGTTCGACCTATCCAGGAGCGCAACCGCCTGCTCATCGCCAACCCC CACATCGCGGACTGGTGGGTGTGGGAAAGAATGGACGTCTTCAAGAAATA CTTCCTCGGACCGGAGATGGCTGACGCTACCTGGAGTTGGGACAGGGCGG AGTGGCGGAGTCGATCCAGCCTTCACGTGCATGGGTGCAGCTCGTGGGCG TGCGAAGGGGATGAGCGCTTGACAGAGCTCGCCCGCACATACCTCAAAGG CCACATCGGGCGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1025:72203..74065+

>mRNA_P-littoralis_Contig1025.30.1 ID=mRNA_P-littoralis_Contig1025.30.1|Name=mRNA_P-littoralis_Contig1025.30.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1044bp|location=Sequence derived from alignment at P-littoralis_Contig1025:72203..74065+ (Pylaiella littoralis U1_48)
ATGTTTTGCACCACCTGCCACGAGGCCTGGCCTTGCAAAAACCCACCACC
TGGCGGTGGGAGCGTGTACCAGTGCGGGAGGTCAGTGTCTTCGTCGTTCG
TTCTGTTGGCGAAGTTCAGCGCCGGCAACGACATGATGCCTGGCCCCGTG
CCTGAGGCCCTGCGAGGTCTCACGATGTCACAGGAGATTGTGATATCCAT
GGCATTTCCCGTGTGCAAGGTGTTTCGGCTCGCCGGCGGCGCCCACGGCT
ACAAGGGACACGTTATGAGCATTGGGCAGAACATAGGGCGCTTCGTGAGG
ACTCTTCCGTGGCTTCCCAACTCGGACGAGATGCCCGTCATCATCATTCA
GCCTCCCAGCGGCGGCAGTTGGGCAGGGCGCGAGTTTAAGGTCAGCCTCA
CGAGGGTGGAGCGGGCTCTGAACTACCTCATCCTCCACTGCCCCCCGTAC
AGGGATGTAGTCGGCATCGACATGGAACGAGTTCGACAGGAATTGGAAGC
ACTGCAACGTGAGGGGGACGGCGACGAGGTCGACGTCATGGGCCTTGACG
AGGACGAGGACGAGGATGGCGATGGCGGCGTGCGAGACCCAGAGGATGCA
GCGAATTCACGGGCTCGTCCTCAACGACAACCGAGGGAGTCCTTCATCCC
CATGCCCGGCAGCGACGAAGGCGAGGCCGAAATTTTGCGACGGCACTTGG
AGGAGATGACGGGGTACAGGGGGAGCGGAGGAAGCGATCCACCTACTATG
CGATACCCAGAGCGGGAGGAGGCGCTGCGAGAAACTACGCCCTGGCTTCG
GAGCATGTGCTTCCCGGCCCTTTTCCCCGAAGGTGTCGGTGATCCTTCCG
GACCTCGAGTGAGGGAGGCCAGGGACGTCGATATCATCACCCACCTCATG
AAGTTCGTGGATCGGCCGGAAGGAGAGGCACATCACTACCGTTTCGCGAG
CCACCGAACCTTTCGCTACTGGGCGCTAGACTTGCGGCTAAGGAACGGGG
CTCGGGGGCAGTGCCGTGTTTTCCTCAGGAACAACCCTGACTAG
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