mRNA_P-littoralis_Contig1025.24.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1025.24.2
Unique NamemRNA_P-littoralis_Contig1025.24.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 5.480e-102
Identity = 211/529 (39.89%), Postives = 295/529 (55.77%), Query Frame = 3
Query:  117 AESEIKEARMKEIVHVHSKLFTSDKVADSDLGISVKLNHPAKLMLLHLGADKSLLLNSPARSTRLKLILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDK-HIVGRVDHFIVAHAPNTVPGKPS-SFTCNKNVTVDNITGDVSQLAAAAADQRCMNVLKGVQFETAKTAFPAALVSFAINRWTVRGDTVMSNVGDTDRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGERPASVPANTTPVRVRGMYEEELKAAMDDDGVERARVPDLAALLVAMTIAHDLGYVLNKNDHDGFGALHAKDNEKYDVTANVIPIWGTIEIYNTIEAARRSIPKDDDSLVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGNTHHEVKNEVPRGKPV--TGAVWKSHTGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYSGGGD*G 1691
            +++++K     +  HVH +++ S  V   DL   V    PAKL+ L+ GADK+LL ++     R++ +  A   SG LH  GT+V  +P P   HA R++ A    G  LEVE+  + VE+ +RGGGR     D+ H+ GRV  F+VAH   T    PS  FTCN+ VT D++ G      A ++   C+N++K V FE A + FP  L++  INR+T   DTV+S  GD D+ +E  LSLGRKVE+FP D  N+  ++ER    F+ AW +G+F R      GL  I  G  P +VP ++ P  V  + + ++ A   + G E +   D    LVA  ++  LGY L ++ +D   AL+     KY +    IPIWG +EI+ +   AR S+  D      VRL+RVAD++QLKQML  GKEFV PGA LY+RVA TCPAYYAR +SS+  THHE+ +EVPR K    T A+W       KTP+ L +YK +        VLVR G S +   + E   S   G D G
Sbjct:  700 SDADMKSFLKDQNTHVHERVYYSHSVGVDDLLTHVGTKEPAKLLFLNPGADKTLLPDNATTLARIRDLTRALVASGSLHASGTVVCALPTPVYEHAHRWAGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTADDVHG------AESSSGPCLNLMKAVPFENALSPFPPRLLTMCINRFTNLQDTVVSTCGDRDKTIETALSLGRKVEVFPVDDRNVDEMRERVKDAFDIAWADGVFKREPDPAGGLRTISPGNLPDAVPRSSAPASVPTVVQ-DMMAEAGETGDEPS---DKVLTLVASKLSSTLGYALVQDGYDSSYALYTIPKMKYAMNGLEIPIWGDMEIHLSPAEARESLRADPVDGA-VRLIRVADSAQLKQMLVPGKEFVAPGATLYMRVAKTCPAYYARWESSDPFTHHEILSEVPRDKKKSDTHALWFDAEDNPKTPIKLRIYKGVTDTSEAQPVLVRPGGSAVYLHDGENSTSDIDGDDGG 1217          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: D8LJG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG8_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 1.310e-95
Identity = 205/528 (38.83%), Postives = 283/528 (53.60%), Query Frame = 3
Query:  120 ESEIKEARMKEIVHVHSKLFTSDKVADSDLGISVKLNHPAKLMLLHLGADKSLLLNSPARSTRLKLILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDK-HIVGRVDHFIVAHAPNTVPGKPS-SFTCNKNVTVDNITGDVSQLAAAAADQRCMNVLKGVQFETAKTAFPAALVSFAINRWTVRGDTVMSNVGDTDRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGERPASVPANTTPVRVRGMYEEELKAAMDDDGVERARVPDLAALLVAMTIAHDLGYVLNKNDHDGFGALHAKDNEKYDVTANVIPIWGTIEIYNTIEAARRSIPKDDDSLVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGNTHHEVKNEVPRGKPV--TGAVWKSHTGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYSGGGD*G 1691
            E +  +A MK  +    K++ S  V   DL   V    PAKL+ L+ GADK+LL ++     R++ +  A   SG LH  GT+V  +P P   HA R++ A    G  LEVE+  + VE+ +RGGGR     D+ H+ GRV  F+VAH   T    PS  FTCN+ VT D++ G      A ++   C+N++K V FE A + FP  L++  INR+T   DTV+S  GD D+ +E  LSLGRKVE+FP D  N+  ++ER    F+ AW +G+F R      GL  I  G  P +VP ++ P  V  + + ++ A   + G E +                      +K+ +D   AL+     KY +    IPIWG +EI+ +   AR S+  D      VRL+RVAD++QLKQML  GKEFV PGA LY+RVA TCPAYYAR +SS+  THHE+ +EVPR K    T A+W       KTP+ L +YK +        VLVR G S +   + E   S   G D G
Sbjct:  321 EEDQSDADMKSFL----KVYYSHSVGVDDLLTHVGTKEPAKLLFLNPGADKTLLPDNATTLARIRDLTRALVASGSLHASGTVVCDLPTPVYEHAHRWAGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTADDVHG------AESSSGPCLNLMKAVPFENALSPFPPRLLTMCINRFTNLQDTVVSTCGDRDKTIETALSLGRKVEVFPVDDRNVDEMRERVKDAFDIAWADGVFKREPDPAGGLRTISPGNLPDAVPRSSAPASVPTVVQ-DMMAEAGETGDEPS----------------------DKDGYDSSYALYTIPKMKYAMNGPEIPIWGDMEIHLSPAEARESLRADRVDGA-VRLIRVADSAQLKQMLVPGKEFVAPGATLYMRVAKTCPAYYARWESSDPFTHHEILSEVPRDKKKSDTHALWFDAEDNPKTPIKLRIYKGVTNTSEAQPVLVRPGGSAVYLHDGENSTSDIDGDDGG 814          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 5.090e-72
Identity = 184/546 (33.70%), Postives = 262/546 (47.99%), Query Frame = 3
Query:  117 AESEIKEARMKEIVHVHSKLFTSDKVADSDLGISVKLNHPAKLMLLHLGADKSLLLNSPARSTRLK-LILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDKHIVGRVDHFIVAHAPNTVPGKPSSFTCNKNVTVDNITGDVSQLAA------AAADQRCMNVLKG-VQFETAKTAFPAALVSFAINRWTVRGDTVMSNVGDTDRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGERPASVPANTTPVRVRGMYEEELKAAMDDDGVERARVPDLAALLVAMTIAHDLGYVLNKNDHDGFGALHAKDNEKYDVTANVIPIWGTIEIYNTIEAARRSIPKDDDS--LVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSE--GNTHHEVKNEVPR--GKPVTGAVWKSHTGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYSGGGD*GGSEAGSG 1712
            AE ++K AR      +H     S    D D+G+    N  AKL+ + LG    LL  +P+    +K L+   C+    LHPEGT+++ +P P   H     E    PG+G+ VE+  L VEY +RGGG    S  K I G +DH+IVAH      G   +FTCN  VT  + TG  S  ++       A+ +R  + L G V  +     +   +V FAI RWT  GDTV+S   ++D V+E  L+LGRKVE F    ++  ++  R    +  AW +GLF+   S  + +T I  G  P  +P  TTP R+            +   V+ A   + A L  A  IA  +G+V+  N  D    L A++   Y  T N IP+ G   +Y++   A  S+  +D S  L +VRLVRVAD   LK+M    +      A LY+RVA +CPAYYA C+  +   + HHE+ + + R   +      +         PV L V   I    PG  V V  G+SV+ P       S SG G   GS+AG G
Sbjct:  100 AEYDVKVARRIASTCIHESTPLSSGFGDLDVGVLKLENGLAKLVFVPLGLHDHLLQENPSAQVHMKGLLYHVCKE--LLHPEGTVLVSLPVPIYKHQRCIVEHLQQPGLGMVVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNGCGDGGGMNFTCNDTVTPQSFTGRRSAGSSDGSTWSTASGRRIPSPLMGDVPRKGVTRGYHDNVVQFAIQRWTKAGDTVVSMHAESDGVVECALNLGRKVEAFLVASEHHGAVTTRVEEAWEGAWRKGLFTDDGSASE-ITYISHGSLPDGIPETTTPNRILADVNTRTNNLREGGSVDGATPDERALLGAAQAIAEQMGWVIKVNSDDDLPYLCARNKTSYQTTHNDIPVSGNPVVYDSHGQALDSLNIEDHSTDLQFVRLVRVADNGLLKKMCPKNQIVKHSEAALYLRVAESCPAYYACCEQGKDKSSAHHEISSYLQRTDNRETLIGAFNDGVPGYHAPVRLVVTGRIAASNPGVAVCVDPGVSVICPQTSGP-SSLSGQGSPEGSDAGGG 641          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 4.140e-69
Identity = 180/544 (33.09%), Postives = 263/544 (48.35%), Query Frame = 3
Query:  117 AESEIKEARMKEIVHVHSKLFTSDKVADSDLGISVKLNHPAKLMLLHLGADKSLLLNSPARSTRLK-LILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDKHIVGRVDHFIVAHAPNTVPGKPSSFTCNKNVTVDNITGDVSQLAA------AAADQRCMNVLKG-VQFETAKTAFPAALVSFAINRWTVRGDTVMSNVGDTDRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGERPASVPANTTPVRVRGMYEEELKAAMDDDGVERARVPDLAALLVAMTIAHDLGYVLNKNDHDGFGALHAKDNEKYDVTANVIPIWGTIEIYNTIEAARRSIPKDDDS--LVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSE--GNTHHEVKNEVPR--GKPVTGAVWKSHTGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYSGGGD*GGSEAG 1706
            AE+++K AR      +H     S   +D D+G+    N  AKL+ + LG    LL  +P+    +K L+   C+    LHPEGT+++ +P P   H     E    PG+G+ VE+  L VEY +RGGG    S  K I G +DH+IVAH   +  G   +FTCN  VT  + TG +S  ++       A+ +R  + L G V  +     +   +V FAI RWT  GDTV+S   ++D V+E  L+LGRKVE F    ++  ++  R    +  AW +GLF+      + +T I  G  P  +P  TTP R+            +   V+     + A L  A  IA  +G+ +  N  D    L A++   Y    N IP+WG   +Y++   A  S+   + S  L +VRLVRVAD   LK+M    +      A LY+RVA +CPAYYA C+  +   +THHE+ + + R   +      +         PV L V   I    PG  V V  G+SV+ P   +   S SG G   GS+AG
Sbjct:  601 AENDVKVARRIASTCIHESTPLSSGFSDQDVGVLKLENGLAKLIFVPLGLHDHLLQENPSAQVHMKGLLYHVCKE--LLHPEGTVLVSLPVPIYKHHRCIVEHLQQPGLGMVVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNASGDGGGMNFTCNDTVTPQSFTGKLSAGSSDGSTWSTASGRRIPSPLMGDVPHKGVTRGYHDNVVQFAIQRWTKAGDTVVSMHAESDGVVEGALNLGRKVEAFLVASEHHGAVTTRVEEAWEGAWRKGLFTDDGDASE-ITYISHGSLPDGIPEITTPHRILADVNTRTNNLREGGRVDGTTPDERALLGAAQAIAEQMGWAIKVNPVDDLPYLCARNKTSYRTAHNDIPVWGKTVVYDSHRQALDSLNVGNHSTDLQFVRLVRVADNELLKKMCPKNQVVKHSEAGLYLRVAESCPAYYACCEQGKDKSSTHHEISSYLQRTDNRETLIGAFNDGVPGYPAPVRLVVTGRIAASNPGVAVYVEPGVSVICPRTSDP-SSSSGQGSPQGSDAG 1140          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 6.080e-53
Identity = 153/488 (31.35%), Postives = 239/488 (48.98%), Query Frame = 3
Query:  240 KLMLLHLGADKSLLLNSPARSTRLKLILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDKHIVGRVDHFIVAHAPNTVPGKPSSFTCNKNVTVDNITGDVSQLAAAAADQRCMNVLKGVQFETAKTAFPAALVSFAINRWTVRGDTVMSNVGDTDRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQ---IKEGERPASVPANTTPVRVRGMYEEELKAAMDDDGVERARVPDLAALLVAMTIAHDLGYVLNKNDHDGFGALHA----KDNEKYDVTANVIPIWGTIEIYNTIEAARRSIPKDDDSLVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGNTHHEVKNEVPRG---KPVTGAVWKSHTGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYS 1673
            KL+++ +GA++ LL  S A +T L+ ++   R  G +HP+GTI L VP P  +H  R  EA     VGL VE+  L + Y  R GGR     + H+   +D  ++ H       + ++FTCNK VTVD+  G  S  + +      M ++  V++E A T      + F INR+T  GDTV S   +   V+E  L   R+VE+F  + ++   +++  L+ F+ A+  G +  S S    L Q   I     P  + AN  P  V    +    + M+ +G         A+L VA T+A + GY L   +    G+  A    + +  Y V ++ +P WG +E++N+   A  S+  D+     VRL+ VA+  QLK+ML  GKE   PGA LY+RVA TCP YY R  +       E  ++VP+      V G   +    A  TP+   V+++  K  P + + V  G +V+     E+ +S S
Sbjct:  354 KLVIVSIGAEQRLLRTSEATNTHLRRVIDNVR--GRMHPDGTIALVVPHPWSAHFHRLQEAVRDACVGLVVEDHPLMLNYSKRVGGRPPIRAENHLKNHLDMVLLIH------NEGATFTCNKRVTVDDPFGFGSDASPS------MQLMTDVEYEGAATDIVMRPLHFLINRYTHAGDTVASLSAERHNVVEAALERSRRVEVFVANPNSKEEVRKNLLASFSRAYKAGKWKASTS----LAQERVISPSCLPLGLEANVIPHEVHRFVD----STMNQEGPAMGEAE--ASLRVATTLAKEFGYSLESPEGWRSGSSEALLLPRRDMDYHVNSHDLPAWGQLEVFNSRPEAFHSLSVDEREDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSQVEGHAFATPMIGRVFRARSKTDPRSPLNVLPGFAVVRSQGFEVRESDS 817          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: A0A6H5K1L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1L5_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 9.080e-23
Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 3
Query: 1185 LHAKDNEKYDVTANVIPIWGTIEIYNTIEAARRSIPKDDDS--LVYVRLVRVADTSQLKQMLTTGKE-FVQPGANLYVRVANTCPAYYARCDSSEGNTH-HEVKNEVPRGKPVTGAVWKSH-TGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYSGGGD*GGS 1697
            L A D ++Y+V A+ +P+WG   + +++E A  SI  DDD+  L YVRL+ VADT  L++M    +E  V   A LY+RVA +CPA+YA  D SE N   HEV+N   R    +  V K   TG+ + PV L V + I  +  G  V V+ GLSV+ P   +  ++ S   D GGS
Sbjct:   26 LFALDAQRYNVGASDLPVWGEYIVSDSLEEAYASIKPDDDAENLQYVRLLHVADTQLLRRMCKEAEESVVSEDAGLYLRVAKSCPAFYALWDESEDNAGTHEVRNRCARTDSTSNLVAKFRGTGSTEFPVFLKVCQEIAAKNRGRGVHVQPGLSVVRPGWYKSPETESSSNDEGGS 201          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: A0A6H5K2Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z9_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 5.320e-22
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 3
Query: 1182 ALHAKDNEKYDVTANVIPIWGTIEIYNTIEAARRSIPKDDD--SLVYVRLVRVADTSQLKQMLTTGKE-FVQPGANLYVRVANTCPAYYARCDSSEGNTH-HEVKNEVPRGKPVTGAVWKSH-TGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYSGGGD*GGS 1697
            AL A D ++Y V A+ +P+WG   +Y++ E A  SI  DDD  +L YVRL+ VADT  L++M    +E  V   A LY+RVA +CPA+YA  D SE N   HEV+N   R    +  V K   TG+ + PV L V + I  +  G +V V+ GLSV+ P   +  ++ S   D GGS
Sbjct:  429 ALFALDAQRYKVGASDLPVWGEYIVYDSREEAYASIQPDDDDQNLQYVRLLHVADTQLLRRMCKEAEESVVSDDAGLYLRVAKSCPAFYALWDESEDNVGTHEVRNRCARTDSTSNLVAKFRGTGSTEFPVFLKVCQEIAAKNRGPVVQVQPGLSVVRPGWYQSPETESSSNDEGGS 605          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: A0A6H5KBS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS8_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.190e-16
Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = 3
Query: 1209 YDVTANVIPIWGTIEIYNTIEAARRSIPKDDDSLVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGNTHHEVKNEVPRG---KPVTGAVWKSHTGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYS 1673
            Y V ++ +P WG +E++N+   A RS+  D+     VRL+ VA+  QLK+ML  GKE   PGA LY+RVA TCP YY R  +       E  ++VP+      V G   +    A  TPV   V+++  K  P + + V  G +V+     E+ +S S
Sbjct:    3 YHVNSHDLPAWGQLEVFNSRPEAFRSLSVDEREDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSQVEGQAFATPVIGRVFRARSKTDPRSPLNVLPGFAVVRSQGFEVRESDS 160          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: A0A6H5JUE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.480e-14
Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 3
Query: 1209 YDVTANVIPIWGTIEIYNTIEAARRSIPKDDDSLVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGNTHHEVKNEVPRG---KPVTGAVWKSHTGAVKTPVALNVYKS 1580
            Y V ++ +P WG +E++N+   A RS+  D+     VRL+ VA+  QLK+ML  GKE   PGA LY+RVA TCP YY R  +       E  ++VP+      V G   +    A  TP+   V+++
Sbjct:    3 YHVNSHDLPAWGQLEVFNSRPEAFRSLSLDEREDQRVRLLHVANNVQLKRMLVPGKEGCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSRVEGQAFATPMIGRVFRA 129          
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Match: A0A6H5KEK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK0_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.680e-12
Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 3
Query: 1209 YDVTANVIPIWGTIEIYNTIEAARRSIPKDDDSLVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGNTHHEVKNEVPRGKPVTGAVWKSHTGAVKTPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMEEELLDSYS 1673
            Y V ++ +  WG +E++N+   A  S+  D      VRL+ VA+  QLK+ML  GKE   PGA LY+RVA TCP YY R  +       E  ++VP+         +    A  TP+   V ++  K  P + + V  G +V+     ++ +S S
Sbjct:    3 YHVNSHDLTAWGQLEVFNSRPEAFHSLSVDKRQDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYTRWTNDVKQATVEFTSKVPQSGS-RAEFSQVEEKAFATPMIGRVVRARSKSDPRSPLNVLPGFAVVRSQGFQVRESDS 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1025.24.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KN26_9PHAE5.480e-10239.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG8_ECTSI1.310e-9538.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZ29_ECTSI5.090e-7233.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK41_9PHAE4.140e-6933.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBJ9_9PHAE6.080e-5331.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1L5_9PHAE9.080e-2340.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2Z9_9PHAE5.320e-2241.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBS8_9PHAE1.190e-1635.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUE7_9PHAE1.480e-1437.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEK0_9PHAE1.680e-1232.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1025contigP-littoralis_Contig1025:61709..64969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1796
Hectar predicted targeting categoryother localisation
Exons6
Cds size1584
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1025.24.2prot_P-littoralis_Contig1025.24.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1025 61817..64865 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789363.5861156-UTR-P-littoralis_Contig1025:61708..618161680789363.5861156-UTR-P-littoralis_Contig1025:61708..61816Pylaiella littoralis U1_48UTRP-littoralis_Contig1025 61709..61816 -
1680789363.6561139-UTR-P-littoralis_Contig1025:64865..649691680789363.6561139-UTR-P-littoralis_Contig1025:64865..64969Pylaiella littoralis U1_48UTRP-littoralis_Contig1025 64866..64969 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789363.5998054-CDS-P-littoralis_Contig1025:61816..623441680789363.5998054-CDS-P-littoralis_Contig1025:61816..62344Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 61817..62344 -
1680789363.6075838-CDS-P-littoralis_Contig1025:62767..629891680789363.6075838-CDS-P-littoralis_Contig1025:62767..62989Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 62768..62989 -
1680789363.6158173-CDS-P-littoralis_Contig1025:63269..634501680789363.6158173-CDS-P-littoralis_Contig1025:63269..63450Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 63270..63450 -
1680789363.629407-CDS-P-littoralis_Contig1025:63787..641271680789363.629407-CDS-P-littoralis_Contig1025:63787..64127Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 63788..64127 -
1680789363.638108-CDS-P-littoralis_Contig1025:64343..646151680789363.638108-CDS-P-littoralis_Contig1025:64343..64615Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 64344..64615 -
1680789363.6465254-CDS-P-littoralis_Contig1025:64824..648651680789363.6465254-CDS-P-littoralis_Contig1025:64824..64865Pylaiella littoralis U1_48CDSP-littoralis_Contig1025 64825..64865 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1025.24.2

>prot_P-littoralis_Contig1025.24.2 ID=prot_P-littoralis_Contig1025.24.2|Name=mRNA_P-littoralis_Contig1025.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=528bp
MPADAESEIKEARMKEIVHVHSKLFTSDKVADSDLGISVKLNHPAKLMLL
HLGADKSLLLNSPARSTRLKLILTACRTSGCLHPEGTIVLFVPPPTQSHA
SRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDKHIVGRVDHFIV
AHAPNTVPGKPSSFTCNKNVTVDNITGDVSQLAAAAADQRCMNVLKGVQF
ETAKTAFPAALVSFAINRWTVRGDTVMSNVGDTDRVLELGLSLGRKVEIF
PDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGERPASVP
ANTTPVRVRGMYEEELKAAMDDDGVERARVPDLAALLVAMTIAHDLGYVL
NKNDHDGFGALHAKDNEKYDVTANVIPIWGTIEIYNTIEAARRSIPKDDD
SLVYVRLVRVADTSQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDS
SEGNTHHEVKNEVPRGKPVTGAVWKSHTGAVKTPVALNVYKSIKKQQPGA
MVLVRRGLSVMLPMEEELLDSYSGGGD*
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mRNA from alignment at P-littoralis_Contig1025:61709..64969-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1025.24.2 ID=mRNA_P-littoralis_Contig1025.24.2|Name=mRNA_P-littoralis_Contig1025.24.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3261bp|location=Sequence derived from alignment at P-littoralis_Contig1025:61709..64969- (Pylaiella littoralis U1_48)
ACAGTGATGAGGAGAGGGAGAAGCGCCGCGGTGCGGGCGCGGGTGCCAGC ACCGACGGTAGCAGCACCAAGTCCAAGAAGAAGCAAAGGCAAAAGGCCAC GGCCATGCCCGCGGACGCGGAGTCGGAGATAAAGGAGGCACGCATGTGAG ACTCTTCATCGACGTATTATGTAAGGCTGCACATTTTTTTCCTTGTGCCA AACTTAGACAGTTGCAGTTCACTGCTACTTGTTCTACTCTTCAAGTCATG TGCTAACATAGTGAAGTGGCTTGACTTGAACCATGCCGTCATATGCGTTT TTCGTAATTCAGCCCGCTCCATCCTCGGCCCCATGCTGCTCCTCCTCCAC GCAGGAAGGAGATCGTGCATGTCCACAGCAAATTGTTTACTTCGGACAAA GTTGCAGACTCGGACTTGGGGATAAGTGTCAAGCTCAACCACCCCGCCAA GTTGATGCTACTCCACCTCGGCGCCGACAAGTCGCTCCTCCTCAACTCGC CCGCTAGAAGCACCCGCCTGAAACTTATTTTGACTGCGTGCCGTACTTCT GGGTGCCTGCACCCGGAAGGTACTATCGTGCTCTTCGTACCGCCCCCCAC CCAAAGCCACGCGTCGCGTTTCAGCGGTGAGTTGAATGGTTTGGCAGCCT CGCCGGCTGTCCTGCTGTACCCGTGTGGAATTCGCGTCGTGGTTGAATGC ACTCGCTACTTCATACAGCAATGACCTTGTTTGTGTTGCTCGTATACATG TTGTGACACGCGTAGCAATCATACCCGTTCGGCGTACCCAACCAACGCAT CCAAAACCTCGTATTTCATTTTTGTTGCACTCTGCCCCACAGAAGCGTGC GCCGTGCCTGGCGTGGGCCTCGAGGTGGAGGAGAGTTTCCTGCATGTCGA GTACATAACAAGGGGCGGTGGGCGGCGCAAGGCCAGCCACGACAAGCACA TTGTAGGAAGGGTCGACCACTTCATCGTTGCCCACGCACCCAACACCGTG CCTGGCAAGCCGAGCAGCTTCACGTGCAATAAGAATGTGACGGTCGACAA CATCACCGGCGATGTATCGCAACTCGCTGCTGCTGCTGCTGATCAGCGTT GTATGAACGTGTTGAAGGGCGTTCAATTTGAGACTGCGAAGACGGCATTC CCGGCGGCACTTGTCTCGTTCGCAATTAACAGGTGTGTACGCACGGCTGG AGAAATCAAGAAGGGTGTACTGTGTTGATCCTCAAAACGGATGAGAAGTG ATTTCCCTAACCCTGCGGGCCGCAAATTGTAGAAAAACTTAGCGGTAGGT ATTTCGTTCTTGGGCGTGTTTGGTTCGCCCATCTGTTCTGAACAGCAGTT GAAAAACTCCCGTGATTTTTGCGCGCATCTGATCAGCCGAATCCCCACAT CCCTAAAGTCGACCAGGGTTTGTTTTTTTTCCATCTTTCATACGTGTCAA GTTGTTTGAGCTTCCACCCATTGCCTGGCCGGCGATATTCTCGCTTTTTG GGGCCGTGGGTTCACGCAGGTGGACTGTACGCGGTGACACAGTCATGTCA AACGTGGGAGACACCGACCGCGTTCTGGAGTTGGGCCTGTCTCTCGGCAG GAAGGTCGAGATCTTCCCCGATGACCTCGACAACATCCCGTCGATTAAGG AACGGGCTCTTTCGAAATTCAATGATGCATGGAATGAAGGTCTTTTCTCG GTAAGGGTTGTATATGGTTCGTGCGTTCTGTCGCTTAACGTTGGCCGGTG ACCGGCGCGTGAAAGGGGTGATATCGACGAGTGACGCACACACACAACCC CTGCAGCCAAAACCCTGAAATATTGACAGAAATGACGAAGAAATTTTGGT GTTCTGTTGAACATAGTCATCTTAACCACCGTCAACCTATCCGTGTGACA TAATCCTCGTCTGAAACTATTCTTCTCAACCACCTCCGTATCCACGCATG CATGTGACACCAACCCTGGTTTTTTCCCAGCGCTCGCTTTCCGGTGAGGA TGGACTCACACAGATAAAGGAAGGAGAGCGGCCAGCCTCTGTCCCGGCGA ATACGACGCCTGTACGGGTTAGGGGCATGTACGAGGAGGAACTCAAGGCG GCGATGGATGATGACGGTGTAGAACGCGCGCGTGTGCCGGACCTTGCGGC TCTTTTGGTAGCCATGACTATCGCTCACGATCTCGGCTACGTTCTAAACA AGGTAAGCTGAAGGTTGCGTGGTGATGGGCTACCGCAAAACACATACCTT TACCGCCGTGTACGACGCGAACAGCTCGACGTGTGGGTGGTGTGGATGGC ACGTCTGCATTTACTGCGACCATCGTACCTCACAAGAACAAGGGCACCAT AAATCGGTGCTCTTTTCTTCTCAAATTTTGCTACGGAAATAAAATGTGTG CGCCAAAAACCTAACCTCATAAAGATAGGGGGCTCATCACATTTGGTTCC CCTGTTCTTATTTGCGGGAGTATAACCCGGTTATTGTGCCCTCTTCCTTA CTGCCGGGTGCTGCATCCTCTCTCTCATATTCAAGTAATTGCACTTCTAT TTGCCTTCACCCGACAAACGCCGTTTATTTGAACTCGCGACGGATGTTTT GTCCCTTACAACGCACTTGTTCCAGAATGACCACGACGGGTTCGGCGCCC TGCATGCTAAGGACAACGAAAAGTACGACGTCACCGCCAACGTCATCCCC ATCTGGGGTACAATTGAGATCTACAACACCATCGAAGCAGCGAGAAGGTC GATTCCGAAAGACGACGACAGTCTTGTTTACGTGCGCCTCGTCCGCGTTG CGGATACCTCTCAGCTCAAGCAAATGCTCACAACAGGGAAGGAGTTCGTT CAGCCGGGGGCCAACCTTTACGTCCGCGTGGCGAATACGTGCCCGGCATA CTACGCTCGGTGTGATTCCTCCGAGGGGAACACGCACCATGAGGTGAAAA ACGAAGTCCCGCGGGGGAAACCAGTCACCGGCGCGGTCTGGAAATCTCAT ACGGGCGCCGTCAAGACCCCTGTCGCACTCAACGTCTACAAATCCATTAA GAAACAACAACCTGGTGCAATGGTTCTCGTCCGTCGCGGGCTGAGTGTCA TGCTTCCGATGGAGGAGGAACTCTTGGACAGCTACAGTGGTGGTGGCGAT TAAGGCGGCAGTGAAGCCGGTTCTGGCGGTGCGAGTGACAACGCCACCGG TGGGATGAGCGACGACTTTCCTGGGTTGGACGCCGAAGTCGCGGATGCCG AGGGCTGACAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1025:61709..64969-

>mRNA_P-littoralis_Contig1025.24.2 ID=mRNA_P-littoralis_Contig1025.24.2|Name=mRNA_P-littoralis_Contig1025.24.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1584bp|location=Sequence derived from alignment at P-littoralis_Contig1025:61709..64969- (Pylaiella littoralis U1_48)
ATGCCCGCGGACGCGGAGTCGGAGATAAAGGAGGCACGCATGAAGGAGAT
CGTGCATGTCCACAGCAAATTGTTTACTTCGGACAAAGTTGCAGACTCGG
ACTTGGGGATAAGTGTCAAGCTCAACCACCCCGCCAAGTTGATGCTACTC
CACCTCGGCGCCGACAAGTCGCTCCTCCTCAACTCGCCCGCTAGAAGCAC
CCGCCTGAAACTTATTTTGACTGCGTGCCGTACTTCTGGGTGCCTGCACC
CGGAAGGTACTATCGTGCTCTTCGTACCGCCCCCCACCCAAAGCCACGCG
TCGCGTTTCAGCGAAGCGTGCGCCGTGCCTGGCGTGGGCCTCGAGGTGGA
GGAGAGTTTCCTGCATGTCGAGTACATAACAAGGGGCGGTGGGCGGCGCA
AGGCCAGCCACGACAAGCACATTGTAGGAAGGGTCGACCACTTCATCGTT
GCCCACGCACCCAACACCGTGCCTGGCAAGCCGAGCAGCTTCACGTGCAA
TAAGAATGTGACGGTCGACAACATCACCGGCGATGTATCGCAACTCGCTG
CTGCTGCTGCTGATCAGCGTTGTATGAACGTGTTGAAGGGCGTTCAATTT
GAGACTGCGAAGACGGCATTCCCGGCGGCACTTGTCTCGTTCGCAATTAA
CAGGTGGACTGTACGCGGTGACACAGTCATGTCAAACGTGGGAGACACCG
ACCGCGTTCTGGAGTTGGGCCTGTCTCTCGGCAGGAAGGTCGAGATCTTC
CCCGATGACCTCGACAACATCCCGTCGATTAAGGAACGGGCTCTTTCGAA
ATTCAATGATGCATGGAATGAAGGTCTTTTCTCGCGCTCGCTTTCCGGTG
AGGATGGACTCACACAGATAAAGGAAGGAGAGCGGCCAGCCTCTGTCCCG
GCGAATACGACGCCTGTACGGGTTAGGGGCATGTACGAGGAGGAACTCAA
GGCGGCGATGGATGATGACGGTGTAGAACGCGCGCGTGTGCCGGACCTTG
CGGCTCTTTTGGTAGCCATGACTATCGCTCACGATCTCGGCTACGTTCTA
AACAAGAATGACCACGACGGGTTCGGCGCCCTGCATGCTAAGGACAACGA
AAAGTACGACGTCACCGCCAACGTCATCCCCATCTGGGGTACAATTGAGA
TCTACAACACCATCGAAGCAGCGAGAAGGTCGATTCCGAAAGACGACGAC
AGTCTTGTTTACGTGCGCCTCGTCCGCGTTGCGGATACCTCTCAGCTCAA
GCAAATGCTCACAACAGGGAAGGAGTTCGTTCAGCCGGGGGCCAACCTTT
ACGTCCGCGTGGCGAATACGTGCCCGGCATACTACGCTCGGTGTGATTCC
TCCGAGGGGAACACGCACCATGAGGTGAAAAACGAAGTCCCGCGGGGGAA
ACCAGTCACCGGCGCGGTCTGGAAATCTCATACGGGCGCCGTCAAGACCC
CTGTCGCACTCAACGTCTACAAATCCATTAAGAAACAACAACCTGGTGCA
ATGGTTCTCGTCCGTCGCGGGCTGAGTGTCATGCTTCCGATGGAGGAGGA
ACTCTTGGACAGCTACAGTGGTGGTGGCGATTAA
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