prot_P-littoralis_Contig167.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig167.13.1
Unique Nameprot_P-littoralis_Contig167.13.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length164
Homology
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.500e-26
Identity = 69/143 (48.25%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    1 MWVVPSVCRDRGRRTSGWLGSESVKGGSTILRSSESGPLTSVLQGWCSGNPSRLGLVYRASRDDWSPKAFLDAKRNRSPCTITLIKIGDGDDSSASIVGGYSGVPVGR---GHPS-----RAFLFMLKSGKSGDPTTFQPVQW 135
            M  +P V R  G      L    V GG+TIL   E G LT+ LQGWC GNP+ + L+YRASRDDWSP  F  +  N SP TITL+++G    +SASIVGG+S VP      G  S      AF+FMLK    G P +FQPV+W
Sbjct:  154 MAYLPHVARALGLSAYIPLQGMEVVGGTTILSHCEVGELTATLQGWCPGNPNTMQLLYRASRDDWSPYPFHASCGNNSPNTITLLRVG----ASASIVGGFSSVPWSPHAYGGDSVMSSLGAFIFMLKDSDMGGPNSFQPVKW 292          
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 8.230e-24
Identity = 61/121 (50.41%), Postives = 75/121 (61.98%), Query Frame = 0
Query:   24 VKGGSTILRSSESGPLTSVLQGWCSGNPSRLGLVYRASRDDWSPKAFLDAKRNRSPCTITLIKIGDGDDSSASIVGGYSGVPVGR---GHPS-----RAFLFMLKSGKSGDPTTFQPVQWG 136
            V GG+T L   E G LT+ LQGWC GNP+ + L+YRASRD WSP  F  +  N SP TITL+++G    +S SIVGG+S VP      G  S      AF+FMLK    G P +FQPV+WG
Sbjct:  155 VVGGTTSLSHCEVGELTATLQGWCPGNPNTMRLLYRASRDGWSPYPFHASCGNNSPNTITLLRVG----ASQSIVGGFSSVPWSPHAYGGDSIMSSLGAFIFMLKDSDMGGPNSFQPVKWG 271          
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: A0A6H5KTF6_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF6_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.290e-18
Identity = 58/131 (44.27%), Postives = 74/131 (56.49%), Query Frame = 0
Query:   32 RSSESGPLTSVLQGWCSGNPSRLGLVYRASRDDWSPKAFLDAKRNRSPCTITLIKI--GDGDDSSASIVGGYS------GVPVGRGHPSRAFLFMLKSGKSGDPTTFQPVQWGIGAGSVMLPHDLGLSWSG 154
            R SE  PLT +LQGWC GNPSRL L+YRASRD W  +AF +     SP TITL ++    G   + +IVGG+S        P  R  P  AF+ M+K G +   ++FQP +W    G   LP+ LG S  G
Sbjct:  136 RLSEVCPLTDILQGWCPGNPSRLHLIYRASRDGWGGEAFHECCGKDSPVTITLFRVLSSAGTAVTDTIVGGFSRSSWSNSCPFSRFSPD-AFICMVKYGSADGSSSFQPSKWIPRRG---LPNYLGTSSHG 262          
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7FR77_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR77_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 9.800e-7
Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0
Query:   46 WCSGNPSRLGLVYRASRDDWSPKAFLDAKRNRSPCTITLIKIGDGDDS---SASIVGGYSGVP 105
            WC GNP RL L+YRASRD W  + F     + SP T+TL ++ D  +    + S++G +S VP
Sbjct:  154 WCPGNPERLDLLYRASRDGWDTRHFHARCGDDSPMTVTLYRLNDASNRKGLNCSVLGCFSSVP 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L232_9PHAE3.500e-2648.25TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G2H5_ECTSI8.230e-2450.41TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KTF6_9PHAE4.290e-1844.27TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FR77_ECTSI9.800e-742.86TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig167contigP-littoralis_Contig167:47567..48058 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig167.13.1mRNA_P-littoralis_Contig167.13.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig167 47077..48392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig167.13.1 ID=prot_P-littoralis_Contig167.13.1|Name=mRNA_P-littoralis_Contig167.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp
MWVVPSVCRDRGRRTSGWLGSESVKGGSTILRSSESGPLTSVLQGWCSGN
PSRLGLVYRASRDDWSPKAFLDAKRNRSPCTITLIKIGDGDDSSASIVGG
YSGVPVGRGHPSRAFLFMLKSGKSGDPTTFQPVQWGIGAGSVMLPHDLGL
SWSGNSCTVRSLT*
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