mRNA_P-littoralis_Contig166.92.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: D8LSK6_ECTSI (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK6_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 6.040e-160 Identity = 238/266 (89.47%), Postives = 249/266 (93.61%), Query Frame = 1
Query: 220 MSKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
MSKL E E+LF+SFR SAEKGDIQ+AKSLLTQLKILMTTFDSLPPMG EGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKP MDFVSQLP SPNQSAV GLNLLFLLVENRLAEFHSELELM DAERA+ECV+FPVRLEQ+LMVGSYDQVLAARDHVPHEYYKY +SLL TVRDGIAE SEAAYSELSI EA KMLRMDQRSELEAF ADK+P WE+TADKIIF+APEACKKSA+IPSMRLIAECLSYATELERIV
Sbjct: 1 MSKLAEGEQLFASFRASAEKGDIQKAKSLLTQLKILMTTFDSLPPMGAEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPLCMDFVSQLPPSPNQSAVLGLNLLFLLVENRLAEFHSELELMGDAERASECVMFPVRLEQFLMVGSYDQVLAARDHVPHEYYKYFLESLLGTVRDGIAECSEAAYSELSIAEAQKMLRMDQRSELEAFVADKYPEWELTADKIIFKAPEACKKSAEIPSMRLIAECLSYATELERIV 266
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A836CF55_9STRA (SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF55_9STRA) HSP 1 Score: 302 bits (774), Expect = 1.290e-95 Identity = 152/270 (56.30%), Postives = 196/270 (72.59%), Query Frame = 1
Query: 217 VMSKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMD--FVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRS-ELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
V L + L S + SAE GD+Q A + L+QLK+++ F SLPP G E A ERTLAR+V+EVAVF+SAR+GD A RHMAQLKP+Y+D + LP S N+ + GLNL+FLLVEN+LA+FHSELELM D +R+NECV+FP+RLEQYLMVGSY+QVLAA+DHVPH+YY YL +L+DTVR+ IA+ AY +S+ +A ML + + EL+ F A HP W++ DK++F+ A KK +IPSMR+I E LSYATELERIV
Sbjct: 4 VQDGLSQGSALLQSLKKSAEAGDMQAANATLSQLKLVLINFPSLPPGGEESATAKAERTLAREVLEVAVFMSARQGDKKALARHMAQLKPYYLDGQLATSLPDSSNRLPLLGLNLIFLLVENKLADFHSELELMSDEDRSNECVMFPIRLEQYLMVGSYNQVLAAKDHVPHQYYSYLLSNLVDTVREAIADCMSTAYDSMSVKDAQTMLMLPASAQELKNFVATFHPEWKIFDDKVVFQHAAATKKMQEIPSMRVITETLSYATELERIV 273
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A7S2V1Z7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z7_9STRA) HSP 1 Score: 254 bits (650), Expect = 7.970e-77 Identity = 135/268 (50.37%), Postives = 174/268 (64.93%), Query Frame = 1
Query: 217 VMSKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVS-QLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
+ L E K+ S + + G + QA + LTQLKILMT LPP + + +ER AR V+E AV LS R+ F RH+AQLKP+Y + +LPASP + V GL+LLFLL ENRLAEFHSELEL+ + ERA+ V FP+ L+Q+L VGSYDQVL A+ VPH YY Y DS++D VR+ +AE + AAY L++ A +LR+D S AFA + W+V D I F PE K+++DIPSMRLI+E L YATELERIV
Sbjct: 30 IQRVLDEGNKILSQMKIDIDGGSLSQASTKLTQLKILMTKLPGLPPCTTDSSTSKKEREFARGVLEQAVLLSTRDEGKSGFPRHLAQLKPYYFGALHRELPASPLRLPVLGLHLLFLLTENRLAEFHSELELLAEEERADPHVRFPIELDQFLAVGSYDQVLEAKASVPHPYYAYFMDSIVDAVREAVAECTAAAYETLALASAATLLRLDGASAAAAFAQGRE--WDVRGDTIYFPRPETSKRASDIPSMRLISESLLYATELERIV 295
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A4D9D7E3_9STRA (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7E3_9STRA) HSP 1 Score: 246 bits (628), Expect = 6.120e-74 Identity = 134/267 (50.19%), Postives = 175/267 (65.54%), Query Frame = 1
Query: 229 LGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIF----RAPEACKKSADIPSMRLIAECLSYATELERIV 1017
L + +KL +++ E + +A SLL LK+L+T F+SLPPM P+A+ E L R V+E AVFL+ ++ D AFQR MAQLKP+Y D L S + + GLNLLFLLVENRLAEFHSELE + +AERAN V FP+ +EQ LMVGSY +VL AR PH Y + L+DTVRD +A+ SEAAY L I A ++L ++ + L +AA KHP W+V D ++ P+ K S D+PS+RLI+E LSYATELERIV
Sbjct: 3 LEQGKKLVIKLQSAVESDHLGEAASLLGDLKVLLTNFESLPPMNQPSPHASEECALGRQVLEQAVFLAVKQRDKIAFQRQMAQLKPYYQDKGRGLTDSALRMPILGLNLLFLLVENRLAEFHSELEHLSEAERANVYVSFPILVEQQLMVGSYHKVLEARTRTPHPGYAFFMSLLVDTVRDAVADCSEAAYERLGIGAAKEILLLESDTALAEYAAVKHPDWKVDGDGFVYFGKDHGPKQAKAS-DVPSLRLISETLSYATELERIV 268
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: C6T763_SOYBN (PCI domain-containing protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C6T763_SOYBN) HSP 1 Score: 239 bits (611), Expect = 1.940e-71 Identity = 125/264 (47.35%), Postives = 166/264 (62.88%), Query Frame = 1
Query: 226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
KL E +LF F+ S + D +LL+QLK+L+T F SLPP+ + PNA E T+ARD+ E AV LS + D DAF+R QLKP+Y D ++LP SP + + GLNLL LLV+NR+AEFH+ELEL+ A N C+ V LEQ M G+Y++VL+AR VPH+ Y Y D L TVRD IA SE AY LSI +A +ML EL + ++HP WE+ + F+ + +IPS++LI + LSYA ELERIV
Sbjct: 4 KLKEVSQLFDRFKASFIRNDFDTCSNLLSQLKVLLTGFRSLPPLFADTPNAVHELTIARDIYEHAVVLSVKNEDQDAFERDFFQLKPYYTDACNRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHDTYVYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNGSVFFQKAKESAPCKEIPSLQLINQTLSYARELERIV 267
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: UPI00125CFE67 (26S proteasome non-ATPase regulatory subunit 8 homolog A-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00125CFE67) HSP 1 Score: 239 bits (611), Expect = 1.940e-71 Identity = 124/264 (46.97%), Postives = 167/264 (63.26%), Query Frame = 1
Query: 226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
KL E + F F+ + + D +LL+QLK+++T F SLPP+ GE PNA E T+ARD+ E AV L+ + D DAF+R QLKP+Y D ++LP SP + + GLNLL LLV+NR+AEFH+ELEL+ N C+ V LEQ M G+Y++VL+AR VPHE Y Y D L TVRD IA SE AY LSI +A +ML EL A+ ++HP WE+ +IF+ + +IPS++LI + LSYA ELERI+
Sbjct: 4 KLTEVSQSFERFKAAFTRNDFDTCTTLLSQLKVMLTAFKSLPPLFGETPNAVHELTIARDIYEHAVVLAVKMEDQDAFERDFFQLKPYYTDARNRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSPNALENPCIKHAVELEQSFMEGAYNRVLSARQAVPHEAYAYFMDLLAKTVRDEIAGCSEKAYDSLSIGDARQMLLFSSDKELLAYVEEEHPEWEIKGGLVIFQKVKDSAPCKEIPSLQLINQTLSYARELERII 267
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: W1PVK8_AMBTC (PCI domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PVK8_AMBTC) HSP 1 Score: 239 bits (610), Expect = 2.730e-71 Identity = 125/265 (47.17%), Postives = 166/265 (62.64%), Query Frame = 1
Query: 223 SKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
+KL EA +LF F+ + + D+ SLL+QLK+L+TTF SLPP+ E P A E T+ARD+ E AV LS + D DAF+R QLKP+Y D +P SP + + GLNLL LLV+NR+AEFH+ELEL+ N C+ V LEQ M G+Y++VL+AR VPHE Y + D L TVRD IA SE AY LSI +A +ML EL + A++HP WE+ + F+ + +IPS++LI + L YA ELERIV
Sbjct: 3 AKLVEASQLFDRFKAAFTRNDLHNCDSLLSQLKVLLTTFPSLPPLYRESPTAVHELTIARDIFEHAVVLSVKAEDQDAFERDFFQLKPYYTDTRGLIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYIHFMDLLAKTVRDEIAGCSEKAYDYLSIEDAKQMLMFSSDQELAQYVAEEHPEWEIRNGCVFFQKAKESAPCKEIPSLQLINQTLGYARELERIV 267
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A2P2PI69_RHIMU (Uncharacterized protein MANES_02G006900 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2PI69_RHIMU) HSP 1 Score: 239 bits (609), Expect = 3.840e-71 Identity = 125/264 (47.35%), Postives = 169/264 (64.02%), Query Frame = 1
Query: 226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
KL E +LF F+ + + DI +LL+QLK+L+T F SLPP+ + PNA E T+ARD+ E AV LS + GD DAF+R QLKP+Y D S+LPASP + + GLNLL LLV+NR+AEFH+ELEL+ N C+ V LEQ M G+Y++VL+A+ +VP++ Y Y D L TVRD IA SE AY LSI +ML +EL + ++HP WE+ +IF+ + +IPS++LI + LSYA ELERIV
Sbjct: 4 KLREVSQLFERFKAACTRDDIDTCSNLLSQLKVLLTGFRSLPPLFEDTPNAVHELTVARDIYEHAVLLSVKIGDQDAFERDFFQLKPYYTDASSRLPASPQEYMILGLNLLRLLVQNRIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPYKSYDYFIDLLAKTVRDEIAGCSEKAYDYLSISHTHQMLLFSSDAELLDYIKEEHPEWEIKDGLVIFQKAKESAPCKEIPSLQLINQTLSYARELERIV 267
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A059C2K3_EUCGR (PCI domain-containing protein n=6 Tax=rosids TaxID=71275 RepID=A0A059C2K3_EUCGR) HSP 1 Score: 238 bits (607), Expect = 7.580e-71 Identity = 125/264 (47.35%), Postives = 166/264 (62.88%), Query Frame = 1
Query: 226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
KL E + F F+ + + D +LL+QLK+L+T F+SLPP+ E PNA E TLARD+ E AV LS + D +AF+R QLKP+Y D +P SP + + GLNLL LLV+NR+AEFH+ELEL+ A N C+ V LEQ M G+Y++VL+AR VPHE Y Y D L TVRD IA SE AY LSI +A +ML EL + ++HP WE+ + + F+ + S +IPS++LI + LSYA ELERIV
Sbjct: 4 KLTEVSQQFGRFKAALVRNDFSTCTTLLSQLKVLLTEFNSLPPLFEETPNAVHELTLARDIYEHAVILSVKMEDQEAFERDFFQLKPYYTDAGGCIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSIGDARQMLLFSSDQELAEYIKEEHPEWEIKSGSVYFQKAKESAPSKEIPSLQLINQTLSYARELERIV 267
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A9PI71_POPTR (PCI domain-containing protein n=6 Tax=Saliceae TaxID=238069 RepID=A9PI71_POPTR) HSP 1 Score: 236 bits (603), Expect = 2.950e-70 Identity = 123/264 (46.59%), Postives = 169/264 (64.02%), Query Frame = 1
Query: 226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
KL E +LF F+ + + D + +LL+QLK+L+T F SLPP+ PNA +E T+ARDV E AV LS + GD +AF+R QLKP+Y D S LP SP + + GLNLL LLV+NR+AEFH+ELEL+ N C+ V LEQ M G+Y++VL+A+ +VP++ Y Y D L TVRD IA SE AY LSI +A +ML +EL + ++HP WE+ ++F+ + +IPS++LI + LSYA ELERIV
Sbjct: 4 KLTEVSQLFERFKAACTREDFNTSTNLLSQLKVLLTGFRSLPPLFENTPNAVQELTIARDVFEHAVLLSVKIGDQEAFERDFFQLKPYYTDASSCLPQSPQEYMILGLNLLRLLVQNRIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPYKTYDYFMDLLAKTVRDEIAGCSEKAYDYLSISDARQMLLFPSENELLEYIKEEHPEWEIKNGSVVFQKAKESAPCKEIPSLQLINQTLSYARELERIV 267 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig166.92.2 >prot_P-littoralis_Contig166.92.2 ID=prot_P-littoralis_Contig166.92.2|Name=mRNA_P-littoralis_Contig166.92.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp MSKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGback to top mRNA from alignment at P-littoralis_Contig166:423115..428187- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig166.92.2 ID=mRNA_P-littoralis_Contig166.92.2|Name=mRNA_P-littoralis_Contig166.92.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5073bp|location=Sequence derived from alignment at P-littoralis_Contig166:423115..428187- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig166:423115..428187- >mRNA_P-littoralis_Contig166.92.2 ID=mRNA_P-littoralis_Contig166.92.2|Name=mRNA_P-littoralis_Contig166.92.2|organism=Pylaiella littoralis U1_48|type=CDS|length=801bp|location=Sequence derived from alignment at P-littoralis_Contig166:423115..428187- (Pylaiella littoralis U1_48)back to top |