mRNA_P-littoralis_Contig166.92.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig166.92.2
Unique NamemRNA_P-littoralis_Contig166.92.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: D8LSK6_ECTSI (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK6_ECTSI)

HSP 1 Score: 466 bits (1200), Expect = 6.040e-160
Identity = 238/266 (89.47%), Postives = 249/266 (93.61%), Query Frame = 1
Query:  220 MSKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            MSKL E E+LF+SFR SAEKGDIQ+AKSLLTQLKILMTTFDSLPPMG EGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKP  MDFVSQLP SPNQSAV GLNLLFLLVENRLAEFHSELELM DAERA+ECV+FPVRLEQ+LMVGSYDQVLAARDHVPHEYYKY  +SLL TVRDGIAE SEAAYSELSI EA KMLRMDQRSELEAF ADK+P WE+TADKIIF+APEACKKSA+IPSMRLIAECLSYATELERIV
Sbjct:    1 MSKLAEGEQLFASFRASAEKGDIQKAKSLLTQLKILMTTFDSLPPMGAEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPLCMDFVSQLPPSPNQSAVLGLNLLFLLVENRLAEFHSELELMGDAERASECVMFPVRLEQFLMVGSYDQVLAARDHVPHEYYKYFLESLLGTVRDGIAECSEAAYSELSIAEAQKMLRMDQRSELEAFVADKYPEWELTADKIIFKAPEACKKSAEIPSMRLIAECLSYATELERIV 266          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A836CF55_9STRA (SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF55_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.290e-95
Identity = 152/270 (56.30%), Postives = 196/270 (72.59%), Query Frame = 1
Query:  217 VMSKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMD--FVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRS-ELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            V   L +   L  S + SAE GD+Q A + L+QLK+++  F SLPP G E   A  ERTLAR+V+EVAVF+SAR+GD  A  RHMAQLKP+Y+D    + LP S N+  + GLNL+FLLVEN+LA+FHSELELM D +R+NECV+FP+RLEQYLMVGSY+QVLAA+DHVPH+YY YL  +L+DTVR+ IA+    AY  +S+ +A  ML +   + EL+ F A  HP W++  DK++F+   A KK  +IPSMR+I E LSYATELERIV
Sbjct:    4 VQDGLSQGSALLQSLKKSAEAGDMQAANATLSQLKLVLINFPSLPPGGEESATAKAERTLAREVLEVAVFMSARQGDKKALARHMAQLKPYYLDGQLATSLPDSSNRLPLLGLNLIFLLVENKLADFHSELELMSDEDRSNECVMFPIRLEQYLMVGSYNQVLAAKDHVPHQYYSYLLSNLVDTVREAIADCMSTAYDSMSVKDAQTMLMLPASAQELKNFVATFHPEWKIFDDKVVFQHAAATKKMQEIPSMRVITETLSYATELERIV 273          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A7S2V1Z7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z7_9STRA)

HSP 1 Score: 254 bits (650), Expect = 7.970e-77
Identity = 135/268 (50.37%), Postives = 174/268 (64.93%), Query Frame = 1
Query:  217 VMSKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVS-QLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            +   L E  K+ S  +   + G + QA + LTQLKILMT    LPP   +   + +ER  AR V+E AV LS R+     F RH+AQLKP+Y   +  +LPASP +  V GL+LLFLL ENRLAEFHSELEL+ + ERA+  V FP+ L+Q+L VGSYDQVL A+  VPH YY Y  DS++D VR+ +AE + AAY  L++  A  +LR+D  S   AFA  +   W+V  D I F  PE  K+++DIPSMRLI+E L YATELERIV
Sbjct:   30 IQRVLDEGNKILSQMKIDIDGGSLSQASTKLTQLKILMTKLPGLPPCTTDSSTSKKEREFARGVLEQAVLLSTRDEGKSGFPRHLAQLKPYYFGALHRELPASPLRLPVLGLHLLFLLTENRLAEFHSELELLAEEERADPHVRFPIELDQFLAVGSYDQVLEAKASVPHPYYAYFMDSIVDAVREAVAECTAAAYETLALASAATLLRLDGASAAAAFAQGRE--WDVRGDTIYFPRPETSKRASDIPSMRLISESLLYATELERIV 295          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A4D9D7E3_9STRA (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7E3_9STRA)

HSP 1 Score: 246 bits (628), Expect = 6.120e-74
Identity = 134/267 (50.19%), Postives = 175/267 (65.54%), Query Frame = 1
Query:  229 LGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIF----RAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            L + +KL    +++ E   + +A SLL  LK+L+T F+SLPPM    P+A+ E  L R V+E AVFL+ ++ D  AFQR MAQLKP+Y D    L  S  +  + GLNLLFLLVENRLAEFHSELE + +AERAN  V FP+ +EQ LMVGSY +VL AR   PH  Y +    L+DTVRD +A+ SEAAY  L I  A ++L ++  + L  +AA KHP W+V  D  ++      P+  K S D+PS+RLI+E LSYATELERIV
Sbjct:    3 LEQGKKLVIKLQSAVESDHLGEAASLLGDLKVLLTNFESLPPMNQPSPHASEECALGRQVLEQAVFLAVKQRDKIAFQRQMAQLKPYYQDKGRGLTDSALRMPILGLNLLFLLVENRLAEFHSELEHLSEAERANVYVSFPILVEQQLMVGSYHKVLEARTRTPHPGYAFFMSLLVDTVRDAVADCSEAAYERLGIGAAKEILLLESDTALAEYAAVKHPDWKVDGDGFVYFGKDHGPKQAKAS-DVPSLRLISETLSYATELERIV 268          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: C6T763_SOYBN (PCI domain-containing protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C6T763_SOYBN)

HSP 1 Score: 239 bits (611), Expect = 1.940e-71
Identity = 125/264 (47.35%), Postives = 166/264 (62.88%), Query Frame = 1
Query:  226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            KL E  +LF  F+ S  + D     +LL+QLK+L+T F SLPP+  + PNA  E T+ARD+ E AV LS +  D DAF+R   QLKP+Y D  ++LP SP +  + GLNLL LLV+NR+AEFH+ELEL+  A   N C+   V LEQ  M G+Y++VL+AR  VPH+ Y Y  D L  TVRD IA  SE AY  LSI +A +ML      EL  +  ++HP WE+    + F+  +      +IPS++LI + LSYA ELERIV
Sbjct:    4 KLKEVSQLFDRFKASFIRNDFDTCSNLLSQLKVLLTGFRSLPPLFADTPNAVHELTIARDIYEHAVVLSVKNEDQDAFERDFFQLKPYYTDACNRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHDTYVYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNGSVFFQKAKESAPCKEIPSLQLINQTLSYARELERIV 267          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: UPI00125CFE67 (26S proteasome non-ATPase regulatory subunit 8 homolog A-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00125CFE67)

HSP 1 Score: 239 bits (611), Expect = 1.940e-71
Identity = 124/264 (46.97%), Postives = 167/264 (63.26%), Query Frame = 1
Query:  226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            KL E  + F  F+ +  + D     +LL+QLK+++T F SLPP+ GE PNA  E T+ARD+ E AV L+ +  D DAF+R   QLKP+Y D  ++LP SP +  + GLNLL LLV+NR+AEFH+ELEL+      N C+   V LEQ  M G+Y++VL+AR  VPHE Y Y  D L  TVRD IA  SE AY  LSI +A +ML      EL A+  ++HP WE+    +IF+  +      +IPS++LI + LSYA ELERI+
Sbjct:    4 KLTEVSQSFERFKAAFTRNDFDTCTTLLSQLKVMLTAFKSLPPLFGETPNAVHELTIARDIYEHAVVLAVKMEDQDAFERDFFQLKPYYTDARNRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSPNALENPCIKHAVELEQSFMEGAYNRVLSARQAVPHEAYAYFMDLLAKTVRDEIAGCSEKAYDSLSIGDARQMLLFSSDKELLAYVEEEHPEWEIKGGLVIFQKVKDSAPCKEIPSLQLINQTLSYARELERII 267          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: W1PVK8_AMBTC (PCI domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PVK8_AMBTC)

HSP 1 Score: 239 bits (610), Expect = 2.730e-71
Identity = 125/265 (47.17%), Postives = 166/265 (62.64%), Query Frame = 1
Query:  223 SKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            +KL EA +LF  F+ +  + D+    SLL+QLK+L+TTF SLPP+  E P A  E T+ARD+ E AV LS +  D DAF+R   QLKP+Y D    +P SP +  + GLNLL LLV+NR+AEFH+ELEL+      N C+   V LEQ  M G+Y++VL+AR  VPHE Y +  D L  TVRD IA  SE AY  LSI +A +ML      EL  + A++HP WE+    + F+  +      +IPS++LI + L YA ELERIV
Sbjct:    3 AKLVEASQLFDRFKAAFTRNDLHNCDSLLSQLKVLLTTFPSLPPLYRESPTAVHELTIARDIFEHAVVLSVKAEDQDAFERDFFQLKPYYTDTRGLIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYIHFMDLLAKTVRDEIAGCSEKAYDYLSIEDAKQMLMFSSDQELAQYVAEEHPEWEIRNGCVFFQKAKESAPCKEIPSLQLINQTLGYARELERIV 267          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A2P2PI69_RHIMU (Uncharacterized protein MANES_02G006900 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2PI69_RHIMU)

HSP 1 Score: 239 bits (609), Expect = 3.840e-71
Identity = 125/264 (47.35%), Postives = 169/264 (64.02%), Query Frame = 1
Query:  226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            KL E  +LF  F+ +  + DI    +LL+QLK+L+T F SLPP+  + PNA  E T+ARD+ E AV LS + GD DAF+R   QLKP+Y D  S+LPASP +  + GLNLL LLV+NR+AEFH+ELEL+      N C+   V LEQ  M G+Y++VL+A+ +VP++ Y Y  D L  TVRD IA  SE AY  LSI    +ML     +EL  +  ++HP WE+    +IF+  +      +IPS++LI + LSYA ELERIV
Sbjct:    4 KLREVSQLFERFKAACTRDDIDTCSNLLSQLKVLLTGFRSLPPLFEDTPNAVHELTVARDIYEHAVLLSVKIGDQDAFERDFFQLKPYYTDASSRLPASPQEYMILGLNLLRLLVQNRIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPYKSYDYFIDLLAKTVRDEIAGCSEKAYDYLSISHTHQMLLFSSDAELLDYIKEEHPEWEIKDGLVIFQKAKESAPCKEIPSLQLINQTLSYARELERIV 267          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A0A059C2K3_EUCGR (PCI domain-containing protein n=6 Tax=rosids TaxID=71275 RepID=A0A059C2K3_EUCGR)

HSP 1 Score: 238 bits (607), Expect = 7.580e-71
Identity = 125/264 (47.35%), Postives = 166/264 (62.88%), Query Frame = 1
Query:  226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            KL E  + F  F+ +  + D     +LL+QLK+L+T F+SLPP+  E PNA  E TLARD+ E AV LS +  D +AF+R   QLKP+Y D    +P SP +  + GLNLL LLV+NR+AEFH+ELEL+  A   N C+   V LEQ  M G+Y++VL+AR  VPHE Y Y  D L  TVRD IA  SE AY  LSI +A +ML      EL  +  ++HP WE+ +  + F+  +    S +IPS++LI + LSYA ELERIV
Sbjct:    4 KLTEVSQQFGRFKAALVRNDFSTCTTLLSQLKVLLTEFNSLPPLFEETPNAVHELTLARDIYEHAVILSVKMEDQEAFERDFFQLKPYYTDAGGCIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSIGDARQMLLFSSDQELAEYIKEEHPEWEIKSGSVYFQKAKESAPSKEIPSLQLINQTLSYARELERIV 267          
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Match: A9PI71_POPTR (PCI domain-containing protein n=6 Tax=Saliceae TaxID=238069 RepID=A9PI71_POPTR)

HSP 1 Score: 236 bits (603), Expect = 2.950e-70
Identity = 123/264 (46.59%), Postives = 169/264 (64.02%), Query Frame = 1
Query:  226 KLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPASPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQYLMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIVEALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMRLIAECLSYATELERIV 1017
            KL E  +LF  F+ +  + D   + +LL+QLK+L+T F SLPP+    PNA +E T+ARDV E AV LS + GD +AF+R   QLKP+Y D  S LP SP +  + GLNLL LLV+NR+AEFH+ELEL+      N C+   V LEQ  M G+Y++VL+A+ +VP++ Y Y  D L  TVRD IA  SE AY  LSI +A +ML     +EL  +  ++HP WE+    ++F+  +      +IPS++LI + LSYA ELERIV
Sbjct:    4 KLTEVSQLFERFKAACTREDFNTSTNLLSQLKVLLTGFRSLPPLFENTPNAVQELTIARDVFEHAVLLSVKIGDQEAFERDFFQLKPYYTDASSCLPQSPQEYMILGLNLLRLLVQNRIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPYKTYDYFMDLLAKTVRDEIAGCSEKAYDYLSISDARQMLLFPSENELLEYIKEEHPEWEIKNGSVVFQKAKESAPCKEIPSLQLINQTLSYARELERIV 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.92.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSK6_ECTSI6.040e-16089.47CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=... [more]
A0A836CF55_9STRA1.290e-9556.30SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-contai... [more]
A0A7S2V1Z7_9STRA7.970e-7750.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D7E3_9STRA6.120e-7450.19CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=... [more]
C6T763_SOYBN1.940e-7147.35PCI domain-containing protein n=2 Tax=Glycine subg... [more]
UPI00125CFE671.940e-7146.9726S proteasome non-ATPase regulatory subunit 8 hom... [more]
W1PVK8_AMBTC2.730e-7147.17PCI domain-containing protein n=1 Tax=Amborella tr... [more]
A0A2P2PI69_RHIMU3.840e-7147.35Uncharacterized protein MANES_02G006900 n=1 Tax=Rh... [more]
A0A059C2K3_EUCGR7.580e-7147.35PCI domain-containing protein n=6 Tax=rosids TaxID... [more]
A9PI71_POPTR2.950e-7046.59PCI domain-containing protein n=6 Tax=Saliceae Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:423115..428187 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSK6
PFAMsCSN8_PSD8_EIF3K
Model size1769
Max annot lvl2759|Eukaryota
KEGG koko:K03031
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005838,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0008541,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016043,GO:0019538,GO:0019941,GO:0022607,GO:0022624,GO:0030163,GO:0032991,GO:0034622,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043248,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051603,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
Exons5
Evalue3.97e-165
EggNOG OGsKOG3151@1|root,KOG3151@2759|Eukaryota
Ec32 ortholog description26S proteasome non-ATPase regulatory subunit Rpn12
Ec32 orthologEc-09_001980.1
Descriptionproteasome assembly
Cds size801
COG categoryO
BRITEko00000,ko00001,ko00002,ko03051
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.92.2prot_P-littoralis_Contig166.92.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig166 423864..427968 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789804.7295978-UTR-P-littoralis_Contig166:423114..4238631680789804.7295978-UTR-P-littoralis_Contig166:423114..423863Pylaiella littoralis U1_48UTRP-littoralis_Contig166 423115..423863 -
1680789804.8077173-UTR-P-littoralis_Contig166:427968..4281871680789804.8077173-UTR-P-littoralis_Contig166:427968..428187Pylaiella littoralis U1_48UTRP-littoralis_Contig166 427969..428187 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789804.7437265-CDS-P-littoralis_Contig166:423863..4240911680789804.7437265-CDS-P-littoralis_Contig166:423863..424091Pylaiella littoralis U1_48CDSP-littoralis_Contig166 423864..424091 -
1680789804.7535737-CDS-P-littoralis_Contig166:424388..4244871680789804.7535737-CDS-P-littoralis_Contig166:424388..424487Pylaiella littoralis U1_48CDSP-littoralis_Contig166 424389..424487 -
1680789804.765944-CDS-P-littoralis_Contig166:425644..4258601680789804.765944-CDS-P-littoralis_Contig166:425644..425860Pylaiella littoralis U1_48CDSP-littoralis_Contig166 425645..425860 -
1680789804.778192-CDS-P-littoralis_Contig166:426216..4263931680789804.778192-CDS-P-littoralis_Contig166:426216..426393Pylaiella littoralis U1_48CDSP-littoralis_Contig166 426217..426393 -
1680789804.7969007-CDS-P-littoralis_Contig166:427887..4279681680789804.7969007-CDS-P-littoralis_Contig166:427887..427968Pylaiella littoralis U1_48CDSP-littoralis_Contig166 427888..427968 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig166.92.2

>prot_P-littoralis_Contig166.92.2 ID=prot_P-littoralis_Contig166.92.2|Name=mRNA_P-littoralis_Contig166.92.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
MSKLGEAEKLFSSFRTSAEKGDIQQAKSLLTQLKILMTTFDSLPPMGGEG
PNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPFYMDFVSQLPA
SPNQSAVRGLNLLFLLVENRLAEFHSELELMEDAERANECVVFPVRLEQY
LMVGSYDQVLAARDHVPHEYYKYLFDSLLDTVRDGIAESSEAAYSELSIV
EALKMLRMDQRSELEAFAADKHPTWEVTADKIIFRAPEACKKSADIPSMR
LIAECLSYATELERIV*
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mRNA from alignment at P-littoralis_Contig166:423115..428187-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig166.92.2 ID=mRNA_P-littoralis_Contig166.92.2|Name=mRNA_P-littoralis_Contig166.92.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5073bp|location=Sequence derived from alignment at P-littoralis_Contig166:423115..428187- (Pylaiella littoralis U1_48)
TACCGTTCGCTTTAGTTCCTCTGGAATCTCGTGCCGGCGTAGGCACTCGC AGATATTGGGCGTCTGCAAGAGAGAAGACACCTTTCACGAGTTCTTCACT GCTGTCGTTGCTGCGCACATCAGGACGGGGAGACGCTGCTCGGCAGGGGT TTACAAAGCAGAGGCAATCCAGCAGCGCGTTTGAGTAGATAGTAGATCCT GGCACTCGCCTCTTTCGTCATGTCAAAGCTAGGCGAGGCCGAGAAGCTCT TCTCGTCCTTCCGGACAAGCGCAGAGAAGGGAGACATCCAACAGGCAAAG GTGCGCTGTACGAGAAGACACATATCATACGATATGAAATTATAGCGCTG CACCATAGACCTACTGCAGTTTACGCCGACACAGTAACTATCGGTCAGGT AAGCTGCTGAGGTAATTGCGAGAGCAGTCCAGATTTGTTGCATGCTGCAA CTGCTGCCGTTGCTATGTGAAGAAGCATTACAGTAACCCCGACAAAACCA TAGCGGCATTCTGAAGGCTGAAAACGGGGTGCGGATATAATCTCCAAGTT GCATATGGTCGGTCACTCGGTCACTCGGTCACTCGGATGTGTTGCGGCTG TCCCCAGACTCCGTGTTCCAGCGGCCACATCTGGCCCGGGGCCCTTTACA AATATGAGCTCGTGCTGCCTTAAAGTAGCATTGCAACATCAGATGGTCAT CAGCTTTTCTACACATCGACGTTTATTCACGTCTGTTCCAGCAACAGCAA ACGGCAGTATTGCACAAGTACGACACACCTTCGTGCTGGCGCTGCGTGTC CGGTGGTCAACCCTGCACCTCCAGTATTTTGACGGCGATGCCCTACAGTA CTACTGTAGTGTAACTTCGTCACGACACACACCCTTTTGCTGGTGTTGCG TATCAGGCGATTAACCCCACACATTACAGTATTTTGACGGCGATGCTCTG ATGCAACCTCCTACCAAAGAAGTATCTACGGACGCACCCAAGAAGATTGT GGGCCCTCACTATCGGCGGTGGTGCGTTGCTTGATCATCAGCAGTATTTG CCGAGCCACACGGCACACCTGTCTCCTTCATGCTGTAAACCTTGTGCCCG GCGGTATTTTTCGTCGGAGTACAGTACAAGTACAGCTTTAACGATGGCAA TGATGCCTCCTGCCTCGAAACACTCCTGGAGACGCCACCCAGGGCCACTG CTGCTGTAGCCACTAACCACACCGTTCACCCGCGGTCTATCATACGTGGC AGCAATCGCACATGAAGCCATCACACATCCTCCTCTGGTAGCAACATCAG ATCAAGACCCAAAAGTCTTCGTCGGAGATACTGCTGCTGTATGATAGCAC GAACAGTTTGGTGAGAAGGGGGGTTATGTTTCCCGTCCCTTAGTAATACT TTCCATTCCCCGGCCGACAGGGCGCGAGCCATATCAAGCACTGCTTGTAA GCTGCTTCCTCGCCCGTGCTTTATTTAGTCCGTGTATGTCGGTACAATAT GGGCAGGCTTGATGATCGAAGTGAGGCTCACTGGCAGCAGCTTGCTCCCA GCCCTTCTCCCGGTCGACGTCGTGGCGGCGCTCACGGAACCACTTTCGGT GGCTGTAACGCTTGAAAATGAAACATGTGTTTTCGTTGTATCAATCGCTG AGCCAGCCCTCTTGTCCGGCCCCCAACCCAAATCCCTTGCCCCCGAACGC GCTGTATGTACGGCTGCTGTGCAAAAAAAAAAAACGAAATTGATTCGATT CGATTCGATTCGATTCGATAAACTCGTTGACGTCATAAGAACAGTCCTTG CTGACCCAGCTGAAGATCCTGATGACTACCTTCGACTCGCTCCCTCCGAT GGGCGGAGAGGGCCCGAACGCCGCTCGGGAGCGAACGCTGGCCCGGGACG TCATGGAAGTGGCCGTGTTTCTCAGCGCGCGAGAGGGGGACAGCGACGCG TTTCAACGCCACATGGCTCAGGTATCATACATATGATACGTACGTGTGAT GTGGTGTGGTGTGGTGTATTCAGCGTGTTTCATGTTTCAGACTGAACGTG AATCAAAATGAAAATGGGTGTGGGACGAATGCACAGCAGCAACTTTCGTG TCGCTCCCCATTGTGTTGCGTTTTTTTTGTCATGTGTTCTGTTTCTCCAG CTGCTGATGTGTTTGTGTTTTTTTGTATCCCAGCCATTATTCACACGTAT GATATGATACTTGAATGCAGGTTGTTTACTTGTACAACACCAATGCCCCC CTTTTATTGCCTCGCTACTTGACCACTTCCCCCTTCTTACCCCTCCCCAC CGCCCCGCCGTCACACGTCACACCCAGCTCAAGCCATTTTACATGGACTT CGTGTCCCAGCTGCCTGCCTCGCCGAACCAGAGCGCAGTGCGGGGGCTGA ATCTGCTTTTCCTTCTCGTGGAGAACCGCCTCGCGGAGTTCCACTCGGAG CTGGAGCTGATGGAGGACGCGGAGAGAGCCAACGAGTGCGTCGTGTTTCC CGTTCGGCTGGAGCAGTACTTGATGGTTGGGAGCTACGACCAGGTGAGAG AAGAAGCAAGGGGGTGGGGGTCAGAGGTGCGGTACGGCGGTGTTGCCGTA GTCTGGCGGGTCTTAGTGTTTTCAGCGCTTGCTGGGTTTTGTTTCTTCTG CGTTGGCGTGCTGTTTTCCCTCTCCTCACTATTTTCGTTTCCTGACTCAC GGAACGCAGGGCAGTACGCCTATCTATCGTGGTAGCCCGGCCATTTTTTT AATTTCATTGTACAGCTGGGGGCGACGGTGTACGAGACCTCAGTTTTATG AGGATAGCGAGTTGAAGGTTTTGAATGGATTTCATTTTTTAGACTAAAAA TAATATTTTTCGAGAGGGGGACTTGTTCAGCGTACCCCCTCCTTAAAAAC GCGGAATCTCGATGTAATGGAAAACCTCCTTCAAAGCGATGCAACAGAAG GCCGTGTTTAAGAGAGGTTTCCTTGACATGCCACACCCCTCTTGCAAGGT AAGCCCCACTGCTGTAGGTGTTCTCGGCGTACCCAGTTATCCGATTGTAG GATGTCCTGCTGTGTTTTTCACCCTCAGCACTTTTGCAGACTTTTCTTTT TACTCATTTGTCCTTGATCGCGCGATATTACTTCCCAAGGCTTGGCGAAA CCGCCAGTTGCGATCCGCCTGACTCTAATGGAAGGCTCTGCTTATGATCA TTTCCTCTTGCCACTAAGCATTTATGTTGAAACCGCTCTGTGTGCTGGTA ATTTTACAGGCTGAAAATGTAGGACAGCAGTGAGCGAGTGTATCCACCGA TGCAATGACGCCGTTGTGTTTTTTAGATGATACTGCCACGCCCTGATAGA AGTGCCCCGTGCATTCGGTGAAGTGATGCCGTTAACCCCCAACTGGTCGA CGTGGCCGTGCATTTCATCTTCGCAAAGACAGGAAATTAATCAAACCCCC GAAATCGAAAATAATACTGAAAGGCTTTGGCGCACACTCACGGCATAAAT ATGCTTTTGCTCACCTCGGAAAATGATTCCGAACACCGTATTCATGGTAT GCACATGGTAAGTATTTTTGGGCTGCCCGCATTACCACTAAAGCAGTGAG CTTGGGTCATTTTTTTTTAACAATGTGCTGTTCTCCAATCCTGTTTGTTC GCTCGATGTTTTCACACTACATAACGTACATTTCAAATCGACTGTCACAG GTGCTGGCGGCTCGAGACCACGTACCGCACGAGTACTACAAATACCTGTT CGACTCACTGCTTGACACCGTCAGGGATGGGATCGCCGAGAGCAGCGAGG TGAGAGGCAAGCTCAACACTGTGCCACGCCACACCTCGCCAGAGATACTT ATCTGAGTTGGTTCGTGGTGGGCGCTACTTTTTCGTTGTCGTTGCTTTAT TTTTTTCCTCACGAGCTCAAGACAGTGTTACAGCAGTAACGTTACGCTCG GAAAAAAAAGTGCGTACGAGCTCAATTCTCTGCCTTGAAGCACCCTGCCG CCGAGTTGGGTTCGACTCTCGTGACGAAATCATCGCTCCGCACGTTGTTG AGAAACCAATACCAATACATTGCAAACTTGAAAACAAAAATCGCAGGCGG CGTACTCAGAACTGTCGATCGTCGAGGCTCTCAAGATGCTCCGCATGGAC CAGCGGTCGGAGCTGGAGGCCTTCGCGGCCGACAAGCACCCGACGTGGGA GGTGACGGCGGACAAGATCATTTTCAGAGCCCCCGAGGCCTGCAAAAAGT CTGCCGACATCCCCTCGATGCGGCTCATCGCGGAGTGCCTCTCGTACGCG ACGGAGCTGGAGCGGATAGTCTGAGCCAATAAAAGCGCCGATGATAGTAC ATAGATGAAGTTTTATTTTGTAGGAAGAGGACTGCTGTGTAAATGAAGCA CGCACAACGCCACGCCCCCCCTCGGTGTTGCGTTCGCGTCAGGGGCGGGG GGGGTAGGGGGCAGGAAGGCGGATGTAGGTGCCGGTGTTCACGGGTGTAT TTTGGTGCTTTTTTTATCTTTCTTTCATTCTGTTGCGGGGCTATCTCTGT CGCTCTTCGGGTGATGAAGGGGTGATCATGAATAGTGATGATATTTTTGG ACAGTGGCGATTGTTGCGACTCGAGGGCAACAAGCCAGCGAAATAAGAAG GGGAAGGCTCGCACAAAGACCTATATTGTCGATGCTCGTTGCACAAACAA CACTGAGCTAATGGAGTTTGAATCGCTAGAAAGCAGGATGCACAAATGAT GGGGGCACTTCTTCTGCATTGCGACCACACTGGTAACGGGTAGATAGGTT GGGATTGACGGGTAGTTCCTTCTTGCACGAAAATCTTTTTCAACACATCC CCGAATATTGCTGGAGATTCATCACTGGTACGATACGGTATACATACGGG CCTGCTGGGTGGAATGCTAGGCATTTCGACAACCGACCGTTGACACCGCC GACATAGTGAAGAACGACGGACGGATACTACGTAGTCCGACGACACAGCA GCAGCATGATCACACGATAGTTACGCACGGCATCGCAAGAGTGTTCGACG CCTGCATCGCGGTGTACAAGATA
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Coding sequence (CDS) from alignment at P-littoralis_Contig166:423115..428187-

>mRNA_P-littoralis_Contig166.92.2 ID=mRNA_P-littoralis_Contig166.92.2|Name=mRNA_P-littoralis_Contig166.92.2|organism=Pylaiella littoralis U1_48|type=CDS|length=801bp|location=Sequence derived from alignment at P-littoralis_Contig166:423115..428187- (Pylaiella littoralis U1_48)
ATGTCAAAGCTAGGCGAGGCCGAGAAGCTCTTCTCGTCCTTCCGGACAAG
CGCAGAGAAGGGAGACATCCAACAGGCAAAGTCCTTGCTGACCCAGCTGA
AGATCCTGATGACTACCTTCGACTCGCTCCCTCCGATGGGCGGAGAGGGC
CCGAACGCCGCTCGGGAGCGAACGCTGGCCCGGGACGTCATGGAAGTGGC
CGTGTTTCTCAGCGCGCGAGAGGGGGACAGCGACGCGTTTCAACGCCACA
TGGCTCAGCTCAAGCCATTTTACATGGACTTCGTGTCCCAGCTGCCTGCC
TCGCCGAACCAGAGCGCAGTGCGGGGGCTGAATCTGCTTTTCCTTCTCGT
GGAGAACCGCCTCGCGGAGTTCCACTCGGAGCTGGAGCTGATGGAGGACG
CGGAGAGAGCCAACGAGTGCGTCGTGTTTCCCGTTCGGCTGGAGCAGTAC
TTGATGGTTGGGAGCTACGACCAGGTGCTGGCGGCTCGAGACCACGTACC
GCACGAGTACTACAAATACCTGTTCGACTCACTGCTTGACACCGTCAGGG
ATGGGATCGCCGAGAGCAGCGAGGCGGCGTACTCAGAACTGTCGATCGTC
GAGGCTCTCAAGATGCTCCGCATGGACCAGCGGTCGGAGCTGGAGGCCTT
CGCGGCCGACAAGCACCCGACGTGGGAGGTGACGGCGGACAAGATCATTT
TCAGAGCCCCCGAGGCCTGCAAAAAGTCTGCCGACATCCCCTCGATGCGG
CTCATCGCGGAGTGCCTCTCGTACGCGACGGAGCTGGAGCGGATAGTCTG
A
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