prot_P-littoralis_Contig166.83.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig166.83.3
Unique Nameprot_P-littoralis_Contig166.83.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1279
Homology
BLAST of mRNA_P-littoralis_Contig166.83.3 vs. uniprot
Match: D8LSJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ6_ECTSI)

HSP 1 Score: 597 bits (1538), Expect = 1.390e-189
Identity = 749/1129 (66.34%), Postives = 788/1129 (69.80%), Query Frame = 0
Query:  158 SSTLPVE-PSG-RASSKGSSPDPLRKNAT----GGVPGPSVPAATAAVTRGDTANGLSIFLQCMSRRRLKLAAEAVGAGGARAREAVAAKQGGVPACNMFLRTLGDSGRIDDCVVAYEAMVACELRPTIVTFSTLISRAGTCGRVRVAERFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELNERRSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGGTEASSLSGRVGT---PAVVVPGGGPRRTQDPSPAEPVRGRGTAAANYGEEREDEQG---GAWRMDRKLEGDLLKLFGQADQVDAAFKVLEGMVERRDSPDSKTWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKAISEENTLRTRALQRTRMLETRRSS-RSTGVSKPTEFSADAATXXXXXXXXXXXXXXXXXXXXXXXXXXGSLSDTTGQDRDHGAEKQPAAGEPAXXXXXXXXXXXXXXTQSYPRADSSVIAAWESSGRAGSTAPXXXXXXXXXXXXXXXXXXXXXXXXXGVDGRSEVTTPGAPSAXXXXXXXXXXXXXXXXXXXENPNPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGELDRALRVVQLMVDDEDGGGLQPDAVTYTSLIKAAARANPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAGDHGRALQVWRQQLSAGVKPGARSSRAALAACAGXXXXXXXXXXXXXXXXXXXXXXXXXLLDLVNLCRANGKDSVVARVMRERSKSSAIRSSXXXXXXXXXXXXXXXXXVSMR-NSAGS 1272
            SS +PVE P+G R S     P P   NA     GGVPGPSVP ATAAV RGD ANG+ +FL+CMSRRRLKLAA         A  A + KQGGVPACN+FLR LGD+GRIDDCV AYEAM+AC+LRPTIVTFSTLISRAG C RVR+AERF    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   DELN+RR NSXXXXXXXX                                                                +  SG VG    PA +    GP     P        RG A    G   E       GAWRM+RKLE DLL+LFGQADQVDAAFKVLEGMVERRDSPD +TWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKAISEENTLRTRALQRTRMLETRRS   S+ V +P E S+ AA                               D    DR    + +  A                  T+++ + + SVIAAW SS     TA                             GRSE +  G P+A                   +N NPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGE DRAL VV+LMVDD +GGGLQPDAVTYTSLIKAAARA PPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMA D+GRAL++WRQQLSAGV PG RS+RAALAAC G                         LLDLVNLCRANG  SV AR+MRERSK+ A  +                  VSMR NSAGS
Sbjct:   10 SSMMPVEGPAGARPSEISVDPFPNTANANASGGGGVPGPSVPGATAAVVRGDIANGVEMFLECMSRRRLKLAA---------ATAAASPKQGGVPACNVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVLDELNKRRPNSXXXXXXXXRNGDTNAAEFVREVGHVDSDTRSSSGRGTGIGDVARKEAAGRGPATAMAGTVSADPADSENVTEAFFSGTVGITPGPAGIDTIAGPNPLPPPMATAEAITRGGATTGEGGSGETATARGRGAWRMNRKLESDLLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKAISEENTLRTRALQRTRMLETRRSPPSSSAVRRPAEGSSVAAAASAPGAPAQSSPLPSTAPGTTSGGASTLPRDGV-DDRGKSLDVRADAVGTTKVVAGGGKGPAAAATRAHAKEEPSVIAAWSSSSSGRGTAGPATKAGGVGGYAS--------------SGRSEASLRG-PTADPTESSRAPSSTSS-----DNANPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVNLCRANGLQSVAARIMRERSKTDATTNRRRSN-------------VSMRRNSAGS 1095          
BLAST of mRNA_P-littoralis_Contig166.83.3 vs. uniprot
Match: A0A836CEM1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.190e-37
Identity = 93/213 (43.66%), Postives = 126/213 (59.15%), Query Frame = 0
Query: 1034 NPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGELDRALRVVQLMVDDEDGGGLQPDAVTYTSLIKAAARANPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAGDHGRALQVWRQQLSAGVKPGARSSRAALAACAGXXXXXXXXXXXXXXXXXXXXXXXXXLLDLVNLCRANGKDSVVARVMRERSKSSAIRSS 1246
            +PA DNLFRVFLVF EM+S+GV+PD  AYNAL+N+CA +G+L+RA+ V++ M +DE    L PDA+T+TSLIK AA A+    + AEEIFA MQQRTNHFSTF RP+E T+ H++ A++      R  ++W Q L+ G+ P +R+    L AC                           LL LV LC + G       ++R+RS      SS
Sbjct:  654 DPAADNLFRVFLVFGEMKSQGVQPDRPAYNALINSCAAVGDLERAMAVLRQMYEDEHC--LPPDAITFTSLIKTAAAAH--NADAAEEIFAAMQQRTNHFSTFHRPSERTFRHMITANMNIKRFSRVQELWAQMLAEGLAPSSRTCSLVLGACRHQGDLTQALSVYGVMNTAGIRPDNRSLLSLVRLCESAGMADKARDIIRDRSSLEHKNSS 862          
BLAST of mRNA_P-littoralis_Contig166.83.3 vs. uniprot
Match: A0A7S0XEC2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEC2_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.130e-19
Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 0
Query: 1038 DNLFRVFLVFQEMR-SRGVRPDLRAYNALVNTCADLGELDRALRVVQLMVDDEDGGGLQPDAVTYTSLIKAAA-RANPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMR 1149
            D+LFR++LVFQEM+ +  ++ D   YN L+N CA +G++DRAL  +  M ++    G++P+ +TYTSLIKA A  +    +E AE IF  MQQR+NHFS + +P E+TY  LM+
Sbjct:  173 DDLFRLYLVFQEMKYNPAIQLDTAVYNTLINACAGVGDIDRALETMTAMQEN----GIEPNVITYTSLIKACAFNSRNEMIELAENIFNEMQQRSNHFSNYIQPNEMTYEKLMQ 282          
BLAST of mRNA_P-littoralis_Contig166.83.3 vs. uniprot
Match: A0A0G4F8K7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8K7_VITBC)

HSP 1 Score: 74.7 bits (182), Expect = 9.980e-10
Identity = 140/492 (28.46%), Postives = 198/492 (40.24%), Query Frame = 0
Query:  693 LLKLFGQADQVDAAFKVLEGMVERRDSPDSKTWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKAISEENTLRTRALQRTRMLETRRSSRSTGVSKPTEFSADAATXXXXXXXXXXXXXXXXXXXXXXXXXXGSLSDTTGQDRDHGAEKQPAAGEPAXXXXXXXXXXXXXXTQSYPRADSSVIAAWESSGRAGSTAPXXXXXXXXXXXXXXXXXXXXXXXXXGVDGRSEVTTPGAPSAXXXXXXXXXXXXXXXXXXXENPNPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGELDRALRVVQLMVDDEDGGGLQPDAVTYTSLIKAAARANPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAGDHGRALQVW-RQQLSAGVKPGARSSRAAL 1183
            L+++F QA  ++ AF + E M+++R +PD  T   L +A+                R   H   I+ +TYSA+LGAC RA+ + +AF + + M   GV P E     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +S+E   R RA    R L   R    T +++P+                                          Q  D   ++ P +  PA                        V+   +   RA  + P                                +     PS                    E  +   +NLFR+FLVFQEM+S GV+PDL AYN L++ C   GE+++A+ V                                     A      MQQRTNHF++   P+E+T+  LM A+  A    R  +++   Q   G++P  R+   A+
Sbjct:  373 LMQMFSQARLLNRAFDMFERMIQQRQAPDQATLQTLFDAIXXXXXXXXXXXXXXXMRESTH---ISRVTYSAVLGACRRARTIVKAFLLFKDMMAAGVTPGESEYLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTVSDE--FRRRAA---RKLNRHRQIADTPITEPS------------------------------------------QTPDTSLDRLPPSPSPAQFPWNAAMSSVDLRQGKKLSPPRDVLDRRKK--RAEPSPPERRVEA------------------------EALPASAPPSVALGLSRPRLRHLDSMAYSLEEQHYYRENLFRIFLVFQEMQSSGVQPDLCAYNTLLDACGRAGEVEKAMEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA------MQQRTNHFASCVLPSELTFKQLMLANRNAYRLRRVFELFDMMQRQHGIRPTLRTGAIAI 782          
BLAST of mRNA_P-littoralis_Contig166.83.3 vs. uniprot
Match: A0A7S2E620_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E620_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.320e-7
Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = 0
Query: 1032 NPNPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGELDRALRVVQLMVDDEDGGGLQPDAVTYTSLIKAAARANPPRVEEAEEIF 1123
            N N A   L +VFLVFQEMR  G +PD   YN L+  CA  G+  RA  V+  ++D +D   L+P  V++  +++AA+R+        E+++
Sbjct:  749 NINDAKTLLVKVFLVFQEMRDAGAKPDTACYNVLLGACARAGDFTRARDVLNKLMDSDD---LEPTHVSWREMLRAASRSKTASSHLVEQVW 837          
BLAST of mRNA_P-littoralis_Contig166.83.3 vs. uniprot
Match: A0A7S2D4Z0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2D4Z0_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 6.600e-6
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  248 CNMFLRTLGDSGRIDDCVVAYEAMVACELRPTIVTFSTLISRAGTCGRVRVAER 301
            CN  LR LGD G ++  V  +EAMVA  +RPT VT+ TLISRAG   + ++A R
Sbjct:    2 CNKLLRVLGDGGHLEAMVGVFEAMVASGVRPTQVTYGTLISRAGAHRQPKLASR 55          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.83.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LSJ6_ECTSI1.390e-18966.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEM1_9STRA4.190e-3743.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0XEC2_9STRA1.130e-1946.49Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A0G4F8K7_VITBC9.980e-1028.46Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2E620_9STRA3.320e-736.96Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2D4Z0_9EUKA6.600e-651.85Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 212..309
e-value: 7.0E-8
score: 34.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 433..606
e-value: 2.1E-39
score: 137.8
coord: 1136..1275
e-value: 1.2E-15
score: 59.8
coord: 1010..1135
e-value: 1.7E-20
score: 75.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 691..916
e-value: 4.8E-31
score: 110.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 324..432
e-value: 5.2E-37
score: 129.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 238..448
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 1046..1085
e-value: 3.6E-5
score: 23.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 276..306
e-value: 1.3E-5
score: 24.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 1061..1087
e-value: 0.0021
score: 16.1
coord: 491..525
e-value: 5.1E-6
score: 24.3
coord: 761..794
e-value: 5.4E-6
score: 24.3
coord: 387..419
e-value: 1.6E-7
score: 29.0
coord: 421..455
e-value: 3.1E-9
score: 34.5
coord: 281..315
e-value: 7.6E-6
score: 23.8
coord: 319..349
e-value: 3.4E-6
score: 24.9
coord: 456..489
e-value: 1.1E-8
score: 32.7
coord: 351..384
e-value: 7.7E-10
score: 36.3
coord: 1183..1210
e-value: 0.0014
score: 16.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 313..360
e-value: 2.9E-12
score: 46.6
coord: 390..430
e-value: 3.6E-10
score: 39.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 279..313
score: 10.928473
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 384..418
score: 11.728648
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 454..488
score: 12.167101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 758..792
score: 11.640958
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1097..1129
score: 9.196589
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..558
score: 8.769097
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1058..1088
score: 8.999285
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 793..827
score: 9.525427
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..383
score: 13.339959
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 419..453
score: 12.934392
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1175..1209
score: 8.527949
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 11.662881
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1140..1174
score: 9.262356
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 10.687325
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 1115..1235
e-value: 3.3E-8
score: 33.1
coord: 436..554
e-value: 2.9E-16
score: 59.5
coord: 773..845
e-value: 4.4E-10
score: 39.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1236..1278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 907..928
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1240..1270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 849..871
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 998..1019
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..680
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 1043..1236
coord: 225..555
coord: 693..859

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:353304..363536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.83.3mRNA_P-littoralis_Contig166.83.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig166 353024..365409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig166.83.3 ID=prot_P-littoralis_Contig166.83.3|Name=mRNA_P-littoralis_Contig166.83.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1279bp
MSRTTAPSTQGLQQQQHGNVGYGGGGDGGMLLGWMNPLSSLTQLSFKGRT
TTSTTAFRRQQHQQQQRWHRRCPAEDGPTRGGRKGSTALEFCPGGGSDGG
GGGGLGLRQQSHRHRRRRRPCPRVGFQGPFQGPLLPTRDQQQLAVAFASS
SRRAPSSSSTLPVEPSGRASSKGSSPDPLRKNATGGVPGPSVPAATAAVT
RGDTANGLSIFLQCMSRRRLKLAAEAVGAGGARAREAVAAKQGGVPACNM
FLRTLGDSGRIDDCVVAYEAMVACELRPTIVTFSTLISRAGTCGRVRVAE
RFFREMLEAGITPDVQAVNSLINAFSKAGSPDQALNAFNQMSRYGLTPSV
ITYNSLIDACGRAGDVDRARQVFSSLKEAGLSPNDRTFSALIHSHAVQGQ
VDEAFDWLQEMRARGLRPNRVTYSALINACGRAGQLARAFQTLDEMVSAG
IEPNVITWTTLIDACGKGKELEWSFRLFKEMRERGTVPNGVTCSALMDAC
LKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLGQADKARVVLDE
LNERRSNSSSNSNSSSNTVTDSTQRESAGFGGGRGAGSAVVESNRSSAEA
AAAAPAATADPAAAAAAAAAAARGKGGTEASSLSGRVGTPAVVVPGGGPR
RTQDPSPAEPVRGRGTAAANYGEEREDEQGGAWRMDRKLEGDLLKLFGQA
DQVDAAFKVLEGMVERRDSPDSKTWLLLLNAVDTAGALDKAVELMERSRA
EGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLAL
MEVCRHSRDSKAAVEVFEAMETEGVRPGVRSYTSLLKAISEENTLRTRAL
QRTRMLETRRSSRSTGVSKPTEFSADAATAAAATATASASAAAESSASAF
ASASAGSLSDTTGQDRDHGAEKQPAAGEPAAAAAAAVVVAAPAATQSYPR
ADSSVIAAWESSGRAGSTAPASASAAAETAAAAAAAVASAAATTTGVDGR
SEVTTPGAPSAAAAATSHSSPTATAAAAAAENPNPALDNLFRVFLVFQEM
RSRGVRPDLRAYNALVNTCADLGELDRALRVVQLMVDDEDGGGLQPDAVT
YTSLIKAAARANPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRA
SVMAGDHGRALQVWRQQLSAGVKPGARSSRAALAACAGAGDVDSAVQVYD
IMCDAGIRPNNRSLLDLVNLCRANGKDSVVARVMRERSKSSAIRSSGGGR
RSNSNSSSSSSSSVSMRNSAGSRKDRGW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long