mRNA_P-littoralis_Contig166.64.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig166.64.1
Unique NamemRNA_P-littoralis_Contig166.64.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: UPI00053F3BA8 (uncharacterized protein LOC104908869 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3BA8)

HSP 1 Score: 216 bits (551), Expect = 4.320e-64
Identity = 128/327 (39.14%), Postives = 193/327 (59.02%), Query Frame = 1
Query:    1 SVLVPALSYRRRGQKKDMTPHKEALANTPLKKRTQL-AIAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWA-RKWTAMTADGTRKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAG-----PMVTTTVEVTKGRYKKMMLDHLRLPRPPAAASPADKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQII 960
            S+ + +L   R G+K+ M     AL   PL++RT L + AAA+G+  ST  R MK   ++  T  +KP L    K+AR++W        T +   KF  M N++H+DEKWF +  + QR+Y+   E AP R  +    I KVMF GV+ RP   +   S + GKIGIYPF  +   +R S  R AG     P+ + T EV + +  + ++  ++   PP A     K +W+QQDNARP++ + D D   A T+DG+++RL+NQPA SPD N+LDL F N+IQSL+D+  P++VD L+K V+ A+ +  P + NR+ LSLQ C+ +++
Sbjct:    8 SIEIGSLKKGRVGRKRKMLDP-NALMTIPLRERTTLRSTAAALGMHNSTLYRLMKRGALRKHTNTMKPHLTQSHKLARVLWCLNAIIPATLNTIPKFSHMYNMIHIDEKWFCMSRIMQRYYLGPTEKAPHRTCKSKRFIVKVMFEGVMSRPHITSEGVSIWDGKIGIYPFVDKVPAKRRSNNREAGTLETKPITSITKEVMRQKLIQSVIPAIKQKWPPYAC----KDIWIQQDNARPHIDSTDADFIEAATSDGFNMRLVNQPAQSPDLNVLDLGFFNAIQSLKDQKAPKTVDKLIKVVQAAYDEYDPKLGNRIFLSLQYCMIEVL 329          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS)

HSP 1 Score: 215 bits (547), Expect = 1.210e-62
Identity = 122/288 (42.36%), Postives = 181/288 (62.85%), Query Frame = 1
Query:  109 AIAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWARKWTAMTADGTRK-FDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVTTTVE-VTKGRYKKMMLDHLRLPRPPAA--ASPADKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQII 960
            + + A+ +P+ST  +R+K+  ++P T  +KP L D++KIARL +        +  T+  F  M N VH+DEKWF++    +R+YV  DE  P R  +    ITKVMFL  V RPR   +    FSGKIGI+PFTV+E  +R+S+ R AG M T  V  VTK   +  +++ + +P   +    S   + +++QQDNARP++  +D +   A T +G+DIRL NQPANSPD N+LDL F N+IQSLQ +  PR++D LV AV++++ K P   L+ V LSLQAC+ +++
Sbjct:  111 SFSEALEVPKSTLHQRIKEGEIRPHTNPLKPNLSDQNKIARLHFCLSMLEPNSLQTQPMFKAMYNYVHIDEKWFYMTKESERYYVLPDEDQPHRTCKSKRFITKVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKV-IPAIQSKWHQSSVGETIYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVM 397          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: A0A4Q9LLI7_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LLI7_9MICR)

HSP 1 Score: 207 bits (527), Expect = 2.790e-60
Identity = 124/325 (38.15%), Postives = 194/325 (59.69%), Query Frame = 1
Query:   10 VPALSYRRRGQK-KDMTPHKEALANTPLKKRTQL-AIAAAVGLPQST-FRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWARKWTAMTADGTRKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVTTTVE-VTKGRYKKMMLDHLRLPRPPAAASPA--DKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQIILA 966
            V +   +R G+K K+ + +   + N PL +R  L +++ A+ +P+ST F   +    +K  +  VKP L D++K+ RL +      +  +G   FD + + VH+DEKWF++  VK+ +Y+  +E  P R  +    I K+MF+  V RPR +    + F GKIGI+PF  QE  QR+S+ RA G M+T  VE VT    K M++D++ +P   +   PA   K ++VQQDNA+P+  ++D D+    +AD W+I+   QPANSPD N+LDL F NSIQSLQ   +P ++D L+  V++A+ +     L+ V  +LQAC+E I+LA
Sbjct:   62 VSSKKKKRCGRKPKEYSKNLAQIRNIPLNRRGTLRSLSLAIDIPKSTLFDIFISGKYMKRISSTVKPTLTDKNKMDRLKFCLSKVNLANNGDFLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEEEPERNYKSKRFIMKIMFMAAVARPRYDAHRKNYFDGKIGIWPFVYQEPAQRNSKNRAKGTMITKNVESVTAVHCKNMIIDNV-IPAIKSKFPPAYKKKTIYVQQDNAKPHFSDNDADIVALGSADDWNIKFKAQPANSPDLNVLDLGFFNSIQSLQHEASPHTIDELINCVQDAFHQLEANTLDNVFTTLQACMESIMLA 385          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 206 bits (523), Expect = 5.340e-60
Identity = 118/298 (39.60%), Postives = 181/298 (60.74%), Query Frame = 1
Query:   73 LANTPLKKRTQL-AIAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWARKWTAMTADGTRKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVTTTVE-VTKGRYKKMMLDHLRLPRPPAAASPADKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQII 960
            +   PL +R+ + ++A A+ + ++T  RR+++  ++P T  VKP L + +K  RL +     +     T  F  M NVVH+DEKWF++C    ++Y+  DEP PTR+V+    ITK MFL  V RPR      + FSGKIGI+PFT  E  +R+S+ R AG MVT   E +TK + K  +++ + +P   A      + + +QQDNA+P++  ++ +   A + DG+DIRLI QP NSPD N+LDL F  SIQ LQ    P +++ LV AVK+++ + P   LNRV L+ Q C+++I+
Sbjct:   28 IKQVPLNRRSTVRSLAKAISVSKTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRLEFC---LSQIDPDTLLFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPR------NGFSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKV-IPAIHAKWPQGMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIM 315          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA)

HSP 1 Score: 206 bits (525), Expect = 5.450e-59
Identity = 126/321 (39.25%), Postives = 177/321 (55.14%), Query Frame = 1
Query:   37 GQKKDMTPHKEALANTPLKKRTQLA-IAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWARKWTAMTADGTRKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVTTTVEVTKGRYKKMMLDHLRLPRPPAAASPADKIVW---------VQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQIILAG 969
            G+KK  T   + +A  P   RT L  IA+ V +P ++  R  K   +   + ++KPLL D +K ARL WA+K+          FD M + VH+DEKWF++  VK+  Y+   E  P R  Q    ITKVMFL  V RPR N + +  F GKIG + FT     QR+SR R +G +VT  V V++  Y+ M+++++          PA K  W         +QQDNARP++   D  +  A  ADGWDI +  QP NSPD N+LDL F  +IQSLQ+RT  R++D L+ A   AW     + LN   L+LQ+C+ + I +G
Sbjct:   78 GRKKKYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFVGPDL----VFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNV---------IPAIKNKWPDARTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIRSG 385          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 205 bits (522), Expect = 9.330e-59
Identity = 105/281 (37.37%), Postives = 174/281 (61.92%), Query Frame = 1
Query:  112 IAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWARKWTAMTADGTRKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVTTTVEVTKGRYKKMMLDHLRLPRPPAAASPADKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQ 954
            +A A G+P++   R +K   +  +T  ++P+L  + ++AR  +A+ +      G R++  M + VH+DEKWF++  V +RFY+  DEP P R+ Q   HITKVMFL  V RPR ++++   + GK+G++PF   +  +R S+ R  G  VT  + VTK  Y++ ++D +               ++VQQDNA+P++  DDP++  A   +GW+I+L+ QPA SPD N+LDL F N+IQSLQ +TT R++D+L+K V++A+      VL++  ++LQ  +E+
Sbjct:  106 MAKATGVPKTALWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEE 386          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: A0A834FTG5_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FTG5_RHOSS)

HSP 1 Score: 201 bits (511), Expect = 1.630e-57
Identity = 114/292 (39.04%), Postives = 180/292 (61.64%), Query Frame = 1
Query:  109 AIAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWARKWTAMTADGT--RKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVTTTV-EVTKGRYKKMMLDHLRLPR-----PPAAASPADKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQII 960
            ++AAA+ +P++T  RR+K+  ++P +  +KP L ++ K ARL +       + D +  RKF  M N VH+DEKWF++    + +Y+  +E  P R  +    I KVMFL  V RPR + + N  FSGKIGI+PF  +E  +RSS+ R AG + T  +  VTK   +  +++ + LP      PP++A    + +++QQDNA+P++   D     A T DG+DIRL NQP +SPD N+LDL +  +IQSLQ +  P+++D LV AV++++ +     LNRV +SLQAC+ +++
Sbjct:   80 SLAAAMKVPKTTIHRRIKEGKIRPHSNALKPYLSEQAKKARLQFCLSMLEPSEDESQPRKFKSMYNYVHIDEKWFYMTKEAESYYLLPEEEEPHRTCKSKRFIPKVMFLAAVARPRFDANQNEEFSGKIGIFPFVFKEPARRSSKNRPAGTLETKAILSVTKDIIRSCLINQV-LPAIQSKWPPSSAH---ETIFIQQDNAKPHIQPFDLQFVEAATKDGFDIRLSNQPPSSPDMNVLDLGYFRAIQSLQHQEAPKTIDELVNAVEKSFEELSVDSLNRVFVSLQACMVEVM 367          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: A0A6A5ATA6_9STRA (HTH_Tnp_Tc3_2 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ATA6_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.060e-57
Identity = 109/285 (38.25%), Postives = 172/285 (60.35%), Query Frame = 1
Query:   85 PLKKRTQLAIAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWARKWTAMTADGTRKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVTTTVEVTKGRYKKMMLDHLRLPRPPAAASPADKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQ 939
            P+ +RT  ++A + G+P++T  R ++   ++ +T  +KP++ ++ K  RL +AR +   T+     +  M + VH+DEKWF++  V +R+Y+  DE  P R+     HI KVMFL  V RPR + +  + + GK+G++PF      QR S+ RA G ++TT + VTK  Y++ +LDH+      A   P    +++QQDNARP++  DD  +  A  +DGW I+L+ QPA SPD N+LDL F NSIQ+LQ R    S+D LV AV E++      VL++  ++LQ
Sbjct:   97 PVLRRTFESLAVSSGIPRTTLWRVLQTKKLQRRTSRLKPMVTEKHKADRLAFARSFVHGTSCNGMVWHDMYDRVHIDEKWFYLTEVNRRYYLWHDESTPVRKCNSKRHIIKVMFLTAVARPRFDYARKTMWDGKVGMWPFVAVRPAQRKSKNRARGALITTPIVVTKPFYRQYLLDHVIPAIKQAWPGPRAHPIYIQQDNARPHVEVDDAAVTAAGCSDGWKIQLVAQPAMSPDFNVLDLGFFNSIQALQHRKAVTSIDELVAAVHESFSDLDWRVLDKTFVTLQ 381          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: A0A834LPB9_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LPB9_RHOSS)

HSP 1 Score: 200 bits (509), Expect = 4.960e-57
Identity = 121/301 (40.20%), Postives = 178/301 (59.14%), Query Frame = 1
Query:   73 LANTPLKKRTQL-AIAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWARKWTAMTA-DGTRKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVT-TTVEVTKGRYKKMMLDHLRLPRPPAAASPADKI--VWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQII 960
            +A  P  +RT + +IA A+ +P++T  RR+KD  ++P T  +KP L +  K ARL +       ++      F  M N VH+DEKWF +    +R+Y+   E  P R  +  + ITKVMFL  V RPR +T+ N  FSGKIGI+PFT +E  +R+S+ R AG + T   V VTK   +K +++ + LP   A     + I  + +QQDNARP++   D +     + DG+DIRL  QP NSPD N+LDL F  +IQSLQ +  P+++D LV  V  A+ +  P  L+ V L+LQAC+ +I+
Sbjct:   97 IAALPYSQRTNIRSIAEALEVPRTTIHRRVKDGVMRPHTNPLKPCLSEEGKRARLQFCLSMLEPSSLQSQPTFKNMYNYVHIDEKWFFMTKESERYYLLPHENEPLRTCKSKHFITKVMFLAAVARPRFDTTRNQEFSGKIGIFPFTYKEPAKRTSKNRVAGTLETKVVVSVTKEIIRKCLIEKV-LPAIRAKWPRGNGIETILIQQDNARPHIREFDAEFLEEASKDGFDIRLSFQPPNSPDLNVLDLGFFRAIQSLQYQKAPKNIDELVSVVVSAFEELSPQTLDNVFLTLQACMIEIM 396          
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25)

HSP 1 Score: 199 bits (507), Expect = 5.000e-57
Identity = 114/288 (39.58%), Postives = 167/288 (57.99%), Query Frame = 1
Query:  112 IAAAVGLPQSTFRRRMKDLGVKPQTRYVKPLLRDRDKIARLMWA-RKWTAMTADGTRKFDGMGNVVHMDEKWFHVCNVKQRFYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYPFTVQERDQRSSRKRAAGPMVTTTVEVTKGRYKKMMLDHLRLP----RPPAAASPADKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILDLVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*LSLQACLEQII 960
            +A  + + +ST  + +K   ++P T  +KP L + +KIAR  W+  +       G  +F GM NVVH+DEKWF++  V  R+Y+  DE  P R  +   +ITKVMF+  V RP+ + +  + + GK+GI+PFT     QR S+ RA G M T  +        +  L H  +P    + P  AS   K +++QQDNA P++   DP+ +    +DG+DI+LI QP NSPDTNILDL F  +IQSLQ     ++VD LV  V  ++ +  P  LN+V LSLQACL +I+
Sbjct:   67 MAVKLNVSKSTLGQWVKQGKLRPHTNAIKPALTNMNKIARARWSLSQLQPQITQGGVQFQGMHNVVHIDEKWFYMTKVSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGAS---KDIYIQQDNATPHITAMDPEFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEIL 351          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00053F3BA84.320e-6439.14uncharacterized protein LOC104908869 n=1 Tax=Beta ... [more]
A0A834FW95_RHOSS1.210e-6242.36Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
A0A4Q9LLI7_9MICR2.790e-6038.15Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
UPI0007F012D15.340e-6039.60uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
A0A485KBU5_9STRA5.450e-5939.25Aste57867_2438 protein n=2 Tax=Aphanomyces stellat... [more]
A0A6A5AA16_9STRA9.330e-5937.37Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A834FTG5_RHOSS1.630e-5739.04Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
A0A6A5ATA6_9STRA3.060e-5738.25HTH_Tnp_Tc3_2 domain-containing protein (Fragment)... [more]
A0A834LPB9_RHOSS4.960e-5740.20Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
UPI001C264D255.000e-5739.58uncharacterized protein LOC121774216 n=2 Tax=Salvi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:298432..299483 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog161934.XP_010696339.1
PFAMsHTH_Tnp_Tc3_2
Model size1034
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.88e-60
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size876
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789803.3599408-UTR-P-littoralis_Contig166:298431..2984821680789803.3599408-UTR-P-littoralis_Contig166:298431..298482Pylaiella littoralis U1_48UTRP-littoralis_Contig166 298432..298482 +
1680789803.3940578-UTR-P-littoralis_Contig166:299376..2994831680789803.3940578-UTR-P-littoralis_Contig166:299376..299483Pylaiella littoralis U1_48UTRP-littoralis_Contig166 299377..299483 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789803.3711014-CDS-P-littoralis_Contig166:298482..2990461680789803.3711014-CDS-P-littoralis_Contig166:298482..299046Pylaiella littoralis U1_48CDSP-littoralis_Contig166 298483..299046 +
1680789803.382243-CDS-P-littoralis_Contig166:299064..2993761680789803.382243-CDS-P-littoralis_Contig166:299064..299376Pylaiella littoralis U1_48CDSP-littoralis_Contig166 299065..299376 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.64.1prot_P-littoralis_Contig166.64.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig166 298483..299376 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig166.64.1

>prot_P-littoralis_Contig166.64.1 ID=prot_P-littoralis_Contig166.64.1|Name=mRNA_P-littoralis_Contig166.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=292bp
MTPHKEALANTPLKKRTQLAIAAAVGLPQSTFRRRMKDLGVKPQTRYVKP
LLRDRDKIARLMWARKWTAMTADGTRKFDGMGNVVHMDEKWFHVCNVKQR
FYVRDDEPAPTRQVQHNNHITKVMFLGVVGRPRRNTSNNSNFSGKIGIYP
FTVQERDQRSSRKRAAGPMVTTTVEVTKGRYKKMMLDHLRLPRPPAAASP
ADKIVWVQQDNARPYLINDDPDLRVAMTADGWDIRLINQPANSPDTNILD
LVFLNSIQSLQDRTTPRSVDNLVKAVKEAWRKDPPAVLNRV*
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mRNA from alignment at P-littoralis_Contig166:298432..299483+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig166.64.1 ID=mRNA_P-littoralis_Contig166.64.1|Name=mRNA_P-littoralis_Contig166.64.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1052bp|location=Sequence derived from alignment at P-littoralis_Contig166:298432..299483+ (Pylaiella littoralis U1_48)
TCTGTACTGGTACCTGCTTTGTCCTATAGACGCCGGGGCCAAAAGAAAGA CATGACTCCACACAAGGAGGCGCTTGCGAACACCCCGCTCAAAAAGCGGA CACAGCTGGCCATAGCTGCAGCGGTTGGCCTTCCCCAGTCGACATTTCGT CGTCGTATGAAGGACCTCGGGGTCAAGCCGCAGACGCGGTATGTCAAGCC ACTTCTACGCGACAGAGACAAGATAGCACGGCTCATGTGGGCGAGGAAGT GGACTGCGATGACTGCGGATGGAACTCGCAAGTTCGACGGGATGGGGAAT GTGGTCCATATGGACGAGAAGTGGTTTCATGTGTGCAACGTGAAGCAGCG GTTTTACGTGCGTGACGACGAGCCCGCCCCGACCCGGCAAGTTCAACACA ATAATCACATCACCAAGGTGATGTTTCTGGGAGTTGTTGGGCGGCCGAGG CGCAACACCTCCAACAACTCGAACTTCAGCGGGAAGATCGGAATCTACCC GTTCACCGTTCAAGAGCGAGACCAGAGAAGCAGCCGAAAGAGGGCTGCCG GACCAATGGTGACGACGACAGTGGAGGTAACGAAGGGAAGGTACAAGAAG ATGATGCTTGACCATGTCCTCCCGGACATATAGCTCCGGCTCCCCCGCCC TCCGGCCGCCGCCAGTCCTGCCGACAAGATTGTGTGGGTCCAGCAGGACA ACGCCCGTCCTTATCTCATCAACGATGACCCAGACTTGAGGGTTGCAATG ACGGCGGACGGGTGGGACATCCGGCTGATCAATCAGCCCGCCAACAGCCC GGACACAAACATCCTTGATCTAGTTTTTTTAAACTCGATCCAGTCCCTTC AGGACCGCACAACCCCGAGGAGCGTGGATAACCTGGTCAAGGCCGTCAAG GAGGCATGGCGAAAGGATCCGCCGGCCGTGCTCAACCGAGTGTGACTGAG CCTGCAGGCGTGCCTGGAGCAAATCATTCTTGCGGGGGTGACAACGAGTA CAAGTTGCCGCATATGCGCAAGGGCAGGCTCGAAAACGCGGGTACGCTTC CC
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Coding sequence (CDS) from alignment at P-littoralis_Contig166:298432..299483+

>mRNA_P-littoralis_Contig166.64.1 ID=mRNA_P-littoralis_Contig166.64.1|Name=mRNA_P-littoralis_Contig166.64.1|organism=Pylaiella littoralis U1_48|type=CDS|length=876bp|location=Sequence derived from alignment at P-littoralis_Contig166:298432..299483+ (Pylaiella littoralis U1_48)
ATGACTCCACACAAGGAGGCGCTTGCGAACACCCCGCTCAAAAAGCGGAC
ACAGCTGGCCATAGCTGCAGCGGTTGGCCTTCCCCAGTCGACATTTCGTC
GTCGTATGAAGGACCTCGGGGTCAAGCCGCAGACGCGGTATGTCAAGCCA
CTTCTACGCGACAGAGACAAGATAGCACGGCTCATGTGGGCGAGGAAGTG
GACTGCGATGACTGCGGATGGAACTCGCAAGTTCGACGGGATGGGGAATG
TGGTCCATATGGACGAGAAGTGGTTTCATGTGTGCAACGTGAAGCAGCGG
TTTTACGTGCGTGACGACGAGCCCGCCCCGACCCGGCAAGTTCAACACAA
TAATCACATCACCAAGGTGATGTTTCTGGGAGTTGTTGGGCGGCCGAGGC
GCAACACCTCCAACAACTCGAACTTCAGCGGGAAGATCGGAATCTACCCG
TTCACCGTTCAAGAGCGAGACCAGAGAAGCAGCCGAAAGAGGGCTGCCGG
ACCAATGGTGACGACGACAGTGGAGGTAACGAAGGGAAGGTACAAGAAGA
TGATGCTTGACCATCTCCGGCTCCCCCGCCCTCCGGCCGCCGCCAGTCCT
GCCGACAAGATTGTGTGGGTCCAGCAGGACAACGCCCGTCCTTATCTCAT
CAACGATGACCCAGACTTGAGGGTTGCAATGACGGCGGACGGGTGGGACA
TCCGGCTGATCAATCAGCCCGCCAACAGCCCGGACACAAACATCCTTGAT
CTAGTTTTTTTAAACTCGATCCAGTCCCTTCAGGACCGCACAACCCCGAG
GAGCGTGGATAACCTGGTCAAGGCCGTCAAGGAGGCATGGCGAAAGGATC
CGCCGGCCGTGCTCAACCGAGTGTGA
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