prot_P-littoralis_Contig166.46.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig166.46.1
Unique Nameprot_P-littoralis_Contig166.46.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length71
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig166.46.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 2.510e-6
Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 0 
Query:    4 VMDRQKKRAAEGDNVDYVLARTVRCILQYDAPLLSRRRGGGTSANAGLASKRPLTCFLG 62
            V+DRQK+R ++GDNV YVLARTVR ILQY A       G G     G    R +  F G
Sbjct:  148 VLDRQKERDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFG 206
[Close]
BLAST of mRNA_P-littoralis_Contig166.46.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 48.1 bits (113), Expect = 6.500e-5
Identity = 27/52 (51.92%), Postives = 30/52 (57.69%), Query Frame = 0 
Query:    4 VMDRQKKRAAEGDNVDYVLARTVRCILQYDAPLLSRRRGGGTSANAGLASKR 55
            V+DRQK R +EGDNV YVLARTVR  LQY A       G G     G+   R
Sbjct:  115 VLDRQKARDSEGDNVPYVLARTVRSNLQYLAAQEIGATGQGNQCRRGMFCSR 166
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.46.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE2.510e-649.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI6.500e-551.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:275067..281031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.46.1mRNA_P-littoralis_Contig166.46.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig166 274594..281665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig166.46.1 ID=prot_P-littoralis_Contig166.46.1|Name=mRNA_P-littoralis_Contig166.46.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=71bp
MEAVMDRQKKRAAEGDNVDYVLARTVRCILQYDAPLLSRRRGGGTSANAG
LASKRPLTCFLGLKWRAQPP*
back to top