prot_P-littoralis_Contig993.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig993.7.1
Unique Nameprot_P-littoralis_Contig993.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length94
Homology
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BLAST of mRNA_P-littoralis_Contig993.7.1 vs. uniprot
Match: A0A6H5JV12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV12_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.290e-18
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0 
Query:    1 LPDKTLHNHRACIEAAGPRIKSGCSSVGKLPEGSTVEGLYQSRMQELAESVVDLGKSSSVDFTW 64
            LPD TLH HR CIE+   RIK+ C     LP+G T +GLY SRM+ELAESVV+L +S+ V F W
Sbjct:  106 LPDATLHQHRHCIESCNARIKNACMHTSSLPDGMTADGLYNSRMEELAESVVELSRSTPVPFGW 169
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig993.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JV12_9PHAE1.290e-1857.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig993contigP-littoralis_Contig993:42422..42948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig993.7.1mRNA_P-littoralis_Contig993.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig993 42422..42948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig993.7.1 ID=prot_P-littoralis_Contig993.7.1|Name=mRNA_P-littoralis_Contig993.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=94bp
LPDKTLHNHRACIEAAGPRIKSGCSSVGKLPEGSTVEGLYQSRMQELAES
VVDLGKSSSVDFTWDIRLYGDQGVVPAGSGEGLDQAKGLDREEG
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