prot_P-littoralis_Contig992.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig992.9.1
Unique Nameprot_P-littoralis_Contig992.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length391
Homology
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BLAST of mRNA_P-littoralis_Contig992.9.1 vs. uniprot
Match: A0A6H5JTH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH5_9PHAE)

HSP 1 Score: 572 bits (1473), Expect = 1.100e-202
Identity = 309/387 (79.84%), Postives = 336/387 (86.82%), Query Frame = 0 
Query:    1 MRYSTAPGILMATSLLTQRVDAFVLVAPPSRTSARCGGXXXXXXXXXGQQQFSRTAAQGRLVIGGLARALPGWKRRVVTAMGSGDGARWAPIPNAPNMKAGTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVASALIPLSQALYANGDLDPARETCTRALKILQMAFGQSPTVEMAEALHTLAMVQQAESPQIGDKALGSQNMAYELAMRVCGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPVPLYRQTLSIIEKVIGPEDPSVASALDDLASALLFHRDDDYTDMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPEEALECFRRALAIRAKVLGVDHPDTKSSQELVDEEENIAAAAP 387
            MRYST P +L+A S L  R DAFV VAPPS   A+       XXXXX     S TA +   V   LAR +P  KRR+ TAM + DGARWAPIPN PNM+ GTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVA+ALIPLSQALYANGDL PAR++CTRAL+ILQ A+ + P+VEMAEALHTLAM+QQAESP++GDKALGSQNMA ELAMRV GPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNP+PLYRQTLSIIEKVIGP+DPSVASALDDLASALLFHRDDDYT+MKAVTLLPEAETLA RSLAISRASLGEEHPITAGREHNLGMIKRGLQKP+E+L+CFRRALAIR KVLGVDHPDTKSS+ELV+EEE+  A  P
Sbjct:    1 MRYSTTPAMLVA-SWLANRADAFV-VAPPSH-GAKWRSSRQNXXXXXXXXXLSVTAVRRCSVGSSLARVVPRLKRRMSTAMNTNDGARWAPIPNVPNMEGGTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQRAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLATRSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDTKSSRELVEEEESGTAPPP 384
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BLAST of mRNA_P-littoralis_Contig992.9.1 vs. uniprot
Match: D7FQU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQU3_ECTSI)

HSP 1 Score: 506 bits (1303), Expect = 2.640e-178
Identity = 257/290 (88.62%), Postives = 278/290 (95.86%), Query Frame = 0 
Query:   98 MKAGTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVASALIPLSQALYANGDLDPARETCTRALKILQMAFGQSPTVEMAEALHTLAMVQQAESPQIGDKALGSQNMAYELAMRVCGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPVPLYRQTLSIIEKVIGPEDPSVASALDDLASALLFHRDDDYTDMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPEEALECFRRALAIRAKVLGVDHPDTKSSQELVDEEENIAAAAP 387
            MK G +PEEMMRQMSIPDLAQKLDQAESTFGQVHPQVA+ALIPLSQALYANGDL PAR++CTRAL+ILQMA+ + P+VEMAEALHTLAM+QQAESP++GDKALGSQNMA ELAMRV GPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNP+PLYRQTLSIIEKVIGP+DPSVASALDDLASALLFHRDDDYT+MKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKP+E+L+CFRRALAIR KVLGVDHPD+KSS+ELV+EEE+  A  P
Sbjct:    1 MKGGADPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQMAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDSKSSRELVEEEESGTAPPP 290
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BLAST of mRNA_P-littoralis_Contig992.9.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 7.490e-6
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 0 
Query:  255 LYRQTLSIIEKVIGPEDPSVASALDDLA-----SALLFHRDDDY---TDMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRG----------LQKPEEALECFRRALAIRAKVLGVDHPD 368
            LY+++LSI EKV GP+ P VA+ L+++A      A  +   D +   T  K V  +P    L  +SL I   +LG EHP  A   +NL  + R           L+  ++A   + R+LAI  KV G DHP+
Sbjct:   15 LYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQARRWGSSDKFLGSTSGKCVEAVP----LHRQSLGIREKTLGPEHPDVAESLNNLAGVLRSQASVNPVFEILRNFQDAEPLYERSLAIDEKVYGPDHPE 142
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig992.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JTH5_9PHAE1.100e-20279.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQU3_ECTSI2.640e-17888.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LI51_9PHAE7.490e-634.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 328..361
e-value: 0.36
score: 19.9
coord: 135..168
e-value: 60.0
score: 8.1
NoneNo IPR availablePFAMPF13424TPR_12coord: 303..358
e-value: 2.6E-10
score: 40.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..55
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 118..286
coord: 304..370
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 118..286
coord: 304..370
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 246..376
e-value: 5.1E-27
score: 96.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 109..241
e-value: 1.2E-11
score: 46.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 255..357
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 121..358

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig992contigP-littoralis_Contig992:66143..76086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig992.9.1mRNA_P-littoralis_Contig992.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig992 66056..78636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig992.9.1 ID=prot_P-littoralis_Contig992.9.1|Name=mRNA_P-littoralis_Contig992.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=391bp
MRYSTAPGILMATSLLTQRVDAFVLVAPPSRTSARCGGGGSAKSQQQGQQ
QFSRTAAQGRLVIGGLARALPGWKRRVVTAMGSGDGARWAPIPNAPNMKA
GTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVASALIPLSQALYANGD
LDPARETCTRALKILQMAFGQSPTVEMAEALHTLAMVQQAESPQIGDKAL
GSQNMAYELAMRVCGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMP
NPVPLYRQTLSIIEKVIGPEDPSVASALDDLASALLFHRDDDYTDMKAVT
LLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPEEALEC
FRRALAIRAKVLGVDHPDTKSSQELVDEEENIAAAAPSDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf