prot_P-littoralis_Contig992.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig992.7.1
Unique Nameprot_P-littoralis_Contig992.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1169
Homology
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE)

HSP 1 Score: 1634 bits (4230), Expect = 0.000e+0
Identity = 854/1182 (72.25%), Postives = 963/1182 (81.47%), Query Frame = 0
Query:    1 MHTVGARLRARWTLSVSGGRARVRRRCAFVFEDGPTARSIPPRPRRRNPPCTNXXXXXSRGMATSATTVSKSSVNRASEVAFVSRGEAGAEDGGGRRVLAITDADFPRVLNGPAPGYAEDALRRLALATLPGERANAFVGPVRGRNRRGALKKAPV--------AISRATEDGSGGVNGVPRIEP-CPFKRVPGLEGYVGAALSEGVLSENIEEDEEEQARTFDVQTIGHLSNYTNGGANGEAESQRWPRQQPFSS---SAADEAYAE-DDFVDPLMENRDAGKYDGVGEATDSVELPYSTLRQMQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVWANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAKGNDGVPTVRACLRIAELVQAEVNLVRMKKKLGKKRLPVEISSHRHVREINKKAQIVLDVPKNTEWPAGAKVKLGAALIKLLIETACWTHDKDRGVVTPWDKG-VDRMAGRGDAEEVPAPQPAFLHNVVTVNNRRQGSLSLAPEIFSKMVDEDISRLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLPPVPEGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNASMHSLRCDMKIKASIAKEFRGHVIYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEASTVPPEDATEAELEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFFN 1168
            MHTVGARLRAR   S+SG R+RVRRRC  VF DGPTA+S+PPRPRRR  P        S    T+ T + +SS    S  A  S   A AE  GGRRVLA+TDADFPRVLNGPAPGYAEDALRRL L  LP        G  R  ++RGAL+  P         ++       SGGV G  ++E   P  R  GLEG+VGAALSEG   E+ EE+E++QA  F      +   +TNG  N +A  ++   Q  FSS   SAAD  Y E DDFVDPLM+   A      GE  D VELPYSTL QMQL+REDQSHQEAC+KY KMM+ELMTMGKGT +K IERLLTTWYPALKESIEREQ AVWAN+ D NK  VK+ GSFGG  TYGP LVMLKADKQAVLVMHEVVNLILA GN GV TVRAC R+AELVQAEVNL+RMKKK GKK  PV++SS RHVR++NK+AQ  LD+ ++T WP GA+VKLGAALIKLLIETACWT+DK+ GVVT WDKG  +R  G  D E  P P+ AF+H+++T  + R+G+L++APEIFSKMVDEDISRLATPRFVPMLVPP DWV P++GGFLRL +QIMRT+GEAAQK AL RADLR++Y  LNCLGKVRWRINGH+LDTV+ CLRDKIAVGDLPV EDLPLPP P+GV V   G LRAP + + E+E  FKERR++HYAY+RL+EK KQKNA+MHSLRCDMKIK  IA+EFR HVIYFPYNMDFRGRTYPIPPNLNILG+DFSRGVL+FDEA+PLGEKGLYWLKVH+ANLYGEDKVSFDDRVAFVE NMDKVRDSALRPL+GECWWKGADSPWQCLAVC DLTAALDSPDP +YLS LPVHQDGSCNGLQHYAALGLDA GGAQVNL PS +PQDVY+GVCD+VKKKVALEASTVP E A+  EL  H +AKMVDGLIDRKVVKQTVMTSVYGVTFVGAR QIQ+VLGDKM+  T+ SGVPS EVE+ + KA+AYVAKHTMKVLEELFTEARNTM+WLKAVAQL++K+GQPMSWITPLGLPVLQPYRR + +QVQTLLQGVH+REDSD LP++VKRQTTAFPPNFVHSLDSTHMM+TA+EM+K GVPFAAVHDSYWVHAGNVD+MND+LRQCFVDLYSGPILE+L +SL+MRYPTI+FPPIPERGTLVLD VK SKYFFN
Sbjct:    1 MHTVGARLRAR-AASLSGERSRVRRRCFSVFGDGPTAQSVPPRPRRREKP-----GSISTSTGTTVTAIRRSSNISQSREAASSLDHAEAE--GGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLGNLP-------AGAARAGSKRGALETVPAGAKEEAGRSVDCRIRKESGGVGGAAKLESTAPLARPAGLEGHVGAALSEGFSWESEEEEEDDQAPAFSA--TSNQDGHTNGYTNYQAAIRQCGPQGAFSSTATSAADVVYEEQDDFVDPLMQIPQAVDRGDKGEDKDEVELPYSTLYQMQLEREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTTWYPALKESIEREQEAVWANLTDDNKGTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGQPVKVSSLRHVRKVNKQAQDALDMLEDTHWPIGAQVKLGAALIKLLIETACWTYDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFVHDIITGKSSRRGTLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVTPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRRVYKGLNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIEDLPLPPRPDGVTVGRLGRLRAPVQGEDEDEGVFKERRQKHYAYKRLLEKTKQKNANMHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKNMDKVRDSALRPLEGECWWKGADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKVALEASTVPREGASVVELANHELAKMVDGLIDRKVVKQTVMTSVYGVTFVGARAQIQNVLGDKMIGHTDESGVPSAEVEETVYKASAYVAKHTMKVLEELFTEARNTMDWLKAVAQLVAKEGQPMSWITPLGLPVLQPYRRNDTYQVQTLLQGVHIREDSDNLPVAVKRQTTAFPPNFVHSLDSTHMMMTAIEMDKVGVPFAAVHDSYWVHAGNVDVMNDKLRQCFVDLYSGPILEDLQDSLRMRYPTIDFPPIPERGTLVLDSVKDSKYFFN 1165          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A836CEF2_9STRA (DNA-directed RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF2_9STRA)

HSP 1 Score: 775 bits (2000), Expect = 2.040e-260
Identity = 437/940 (46.49%), Postives = 578/940 (61.49%), Query Frame = 0
Query:  289 LRQMQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVWANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAKGNDGVPTVRACLRIAELVQAEVNLVRMKKKLGKK-RLPVEISSHRHVREINKKAQIVLDVPKNTEWPAGAKVKLGAALIKLLIETACWTHDKDRGVVTPWDKGVDRMAGRGDAEEVPAPQPAFLHNVVTVN-NRRQGSLSLAPEIFSKMVDEDISRLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLPPVPE------GVIVDGRGMLRAP-TKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNASMHSLRCDMKIKASIAKEFRGHVIYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPL-DGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEASTVPPEDATEAELEQHRIAKMVDGLIDRKV------------------------------------------------VKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDK--LPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFFN 1168
            L QM+L  E+Q+  EA  +Y ++ E ++  G+   L+P++R L  W+  L+ +IE EQ  VWAN +              G+  +GPLLV+L+ +K AV+VMHE +NL L  GN GVP    CLR+AE  QAEVNL++M++KLG K ++ +  S+ RHVRE+N +A+  LD+ + T+WP   KV+LGA L+KLL +TA          VTP        A RG  E  P P+ AF H +  +  N++ G L L P  + ++ D +++ L  PR++PMLV P  W R D+GG++ L ++IMRTRG  +Q  AL  A L K+YH LNCLG V WR+N  +          K+ +G+LP  EDLP+PP+P+      G    G+G      T    EE   ++E      A+ R +    Q N   HSLR D++IK  IA+ F G  +YFPYN+DFRGR YP+PPNLN +G DF RGVL F   RPLG +GLYWLKV  A+L+GEDK+SFD+R A+ +A+MD +R SA  PL DG  WW  ADSPWQCLA C +L AA+DS DP  + S LPVHQDG+CNGLQHYAALG DA GG QVNL+P D+P+DVY+GVC +V  +V   A    P DAT  E   H  A+M+ G++DRKV                                                VKQTVMTSVYGVTF+GAR QIQ+ L +++   T A     E     IR  A Y+A  TM  L  LF+EAR  M+WL  +A++++++GQPM+W+TPLGLPV+QPYRR   F ++TLLQ V +    D   LP+   RQ +AFPPNFVHSLDSTHM++TA  M+  G+PFAAVHDSYW HAG+VD+MN  LR  FV+LYS PILE+LH SL  R+P ++FP +P RG L +  V+ S YFFN
Sbjct:  168 LEQMRL--EEQTTAEAGARYRELAEGMVAGGRAGALRPLQRELLKWFIPLRAAIEEEQGRVWANERG------------AGMGAHGPLLVLLQPEKLAVMVMHETLNLTLQGGNAGVPAAGLCLRLAEAAQAEVNLLKMQRKLGSKAQVALRGSARRHVREVNIRAKRALDMLEVTDWPDALKVQLGAVLVKLLCDTA---------KVTP-------EATRGQPE--PTPEAAFRHEIRQLRANKKLGMLFLTPAAYKRVQDWNLAGLMQPRYLPMLVKPKPWQRHDRGGYIMLKARIMRTRGCRSQVDALRVAKLDKVYHGLNCLGSVPWRVNDEVYAIAKEAWDRKLTIGELPPQEDLPVPPMPKTKMYKKGSSRKGKGGAEVDNTPPTPEEHARWRENEIARLAHARAL----QLNLDRHSLRSDLRIKMRIAERFAGRDMYFPYNLDFRGRAYPVPPNLNHMGNDFCRGVLTFARTRPLGARGLYWLKVQAASLFGEDKLSFDERAAYADAHMDAIRRSAEDPLGDGNDWWIRADSPWQCLATCKELIAAIDSGDPKTFESRLPVHQDGTCNGLQHYAALGRDAAGGEQVNLLPGDRPRDVYSGVCKLVAAEVQRAADCELPADATTEEQLAHEYARMLVGIVDRKVKFGWQQVEVLGRGVSEDILKCGTVDLKMIGSQRDDGMRXXXXXXXXXVVKQTVMTSVYGVTFIGARSQIQARLEERLALDTCADAAAVEARAAAIRGCANYLASLTMGALSGLFSEARAIMDWLATLARIVAQQGQPMAWVTPLGLPVVQPYRRGGDFTIKTLLQSVTLSGAGDDAALPVEAARQRSAFPPNFVHSLDSTHMLMTAAAMDARGIPFAAVHDSYWCHAGHVDVMNAALRDTFVELYSRPILEDLHASLTARFPDVKFPRVPPRGALDVGAVRDSAYFFN 1071          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A4D9D3J6_9STRA (DNA-directed RNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J6_9STRA)

HSP 1 Score: 721 bits (1862), Expect = 2.540e-239
Identity = 412/928 (44.40%), Postives = 571/928 (61.53%), Query Frame = 0
Query:  281 SVELPYSTLRQMQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVWANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAKGNDGVPTVRACLRIAELVQAEVNLVRMKKKLGKKRLPV-EISSHRHVREINKKAQIVLDVPKNTEWPAGAKVKLGAALIKLL--------------IETACWTHDKDRGVVTPWDK----------------GVDRMAGRGDA-----EEVPAPQPAFLHNVVTVNNRRQGSLSLAPEIFSKMVDE-DISRLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLPPV---PEGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNASMHSLRCDMKIKASIAKEFRGHVIYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEASTVPPEDATEAELEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFFN 1168
            SV+     LR +++  E+ +  EA  +Y ++ + L   GK  +L  ++R +  WY  + E++     A+ A +++   SD+ +     G+ TYGP L+++  DK AV+ ++E VNLIL  GN GVP     L IA+ V+ EVN +R+ +  G + L +   +    ++ +N+KA+  L+   +  W A  K+K+G  L+  L               E A      + G V    +                GV+  A   DA      E   P    +    T + +++G + L   ++  M    D+    TPR+ PM+V P  W   D GG+L+L S I+R++   AQ  AL  A + ++YH+LN LG+V W ING +L T+       + VGDLP   D  +PP+   P         +L A  ++DG      +ERR     ++ +  +VK++NA + SLRCD +IK SIA+EFR H  YFPYN+DFRGR YP+PPNLN LG+D  RG+L F E RPLG+ GL WLK+H+ANL G+DK+SFDDRVAFVE  M+ V+DSA RPL+G  WW+ A+ PWQ LAVC ++ AA++S DP  +LS +PVH DGSCNGLQHYAALG D +G  QVNL+ S  P+DVYTGVCD V K V  EA+      ATE E  Q R A++VDGLI+RKVVKQTVMTSVYGVT+VGARKQIQ+ L +K  ++ +   +  EE E ++ +A+ YVA  T+  L ELF+ ARN M WL   A L++++GQPMSW+TPLGLPV+QPYRR     V+TL+Q V + + +DKLP+S  RQ +AFPPNFVHSLDSTHM++TA  ++  GVPF AVHDSYW HA NV++MN  LR+CF+ LY  P+LE L +SL  R+P + FPPIP+RG L L++VK S YFF+
Sbjct:  195 SVDTKREQLRDLEVAFEEGTISEALGEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAM----TALHAKLREGKWSDLGN-----GVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRENGMISLKRVNRKAREALE---DGVWRADLKIKVGGMLLSELHRVAKISPECVQDGAEEAHGLEGPEVGSVREKSREKRMRLQAPRLDQAGGGVEGGADSTDALTSANREAERPPALSIALESTRSIKKRGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGA--EEDGVPGRRAEERRLLRDRWQ-IARRVKKRNAELFSLRCDTEIKLSIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEGKMENVQDSAARPLNGHGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEE-EQEVYEASRYVATVTLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFFD 1106          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A7S2HVK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVK7_9STRA)

HSP 1 Score: 678 bits (1750), Expect = 2.160e-225
Identity = 405/936 (43.27%), Postives = 547/936 (58.44%), Query Frame = 0
Query:  277 EATDSVELPYSTLRQMQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVWANIKDKNKSDVKSGGSFGGL------NTYGPLLVMLKADKQAVLVMHEVVNLILA------KGNDGVPTVRACLRIAELVQAEVNLVRMKKK---LGKKRLPVEISSHRHVREINKKAQI--------------VLDVPKNTEWPAGAKVKLGAALIKLLIETACWTHDKDRGVVTPWDKGVDRMAGRGDAEEVPAPQPAFLHNVVTVNNRRQ-GSLSLAPEIFSKMVDEDISRLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLP-LPPVPEGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNASMHSLRCDMKIKASIAKEFRGHVIYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALE---ASTVPPEDATEAELEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISK----------KGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFFN 1168
            E++ S E+    L ++Q +RE  +   AC +Y ++M ++  MGK TH++  E +++ W P   E I++E+ A     K+        G  F GL      N    ++    A K AV+ +H +VN I +        + GV     C  IA  V++E NL  ++KK   L K +     + H+  +++NK                  V DV +  EW    KVK+GA LIK+++E AC   D +                           PAF H  +      + GS+ ++   + ++   +   LA  R +PM+VPP  W+R D+GG+L + ++IMRT G  A   AL  ADL ++   LN L K+ WR+N  +LD        ++A+ +LP   D+P L P+                    EEE+     RKRHY  ++   K+ + N  +HS RCD  +K +IA+E R +VIYFPYN+DFRGR YPIPPNLN LG+D  RG+L F++ +PLGEKGL+WLKVH+ANLYG DK +F+DR+ F   +M +V DSA RPL+G  WW  A+SPWQ LAVC +LT AL  P+P  + S +PVH DGSCNGLQHYAALG D +GGA VNL P  +PQDVY  VC IV  K+  +   A T   E+ TE     HR AK + G++DRKV+KQTVMTSVYGVTFVGAR+QI   L +K ++    +G+  +EV+ +   A+ Y+A+HT++ L+ELF  AR+ M WL   AQLISK          KG  +SW+TPLGLPV QPYR+     V+T+LQ V V    DK P + KRQ +AFPPNFVHSLDSTHM+LTAV+M++ G+ F AVHDSYW HA NVD+MND LR CFVDLYS PILENL E    RYP I FP IP+RG L L+ V+ S YFFN
Sbjct:   24 ESSQSEEMSLQKLMKIQEERERDTMHFACLRYEELMSDMKKMGKLTHMRQAESVISKWLPQAAEMIDQEKEAF--ERKEAAPDRKVYGPIFCGLDSVTHRNGKKNVITQSGAFKLAVITLHTMVNSISSGMGAHSAADKGVGFRFLCKSIANGVESEYNLSLLRKKEKELKKNQSEESKAEHKDSKQLNKALMSPGLTSADARRLRIRVRDVLEENEWGIDMKVKVGAILIKIVLE-ACKDRDGN---------------------------PAFRHETIQAKYAHKVGSVIMSDCAYEELCGTEHKPLAQIRDLPMVVPPQPWLRWDKGGYLSVPTKIMRTHGYRAHSDALRVADLDQVLAGLNALNKLPWRVNHEVLDVAREAWDQRMAIAELPERTDIPELEPL-------------------SEEEDADPLIRKRHYWQQK---KIIRNNCELHSQRCDTILKLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKVHLANLYGFDKANFNDRMQFTMDHMSEVYDSAARPLEGNRWWTKAESPWQVLAVCKELTEALSHPNPEAFESGMPVHMDGSCNGLQHYAALGRDVEGGASVNLTPHHEPQDVYMEVCAIVNHKIDEDFSRAMTTASEELTE----DHRFAKRLKGMVDRKVIKQTVMTSVYGVTFVGARRQIMGQLEEKFIE----AGMHPDEVDREAYAASGYLARHTLEALKELFGGARDIMEWLGTCAQLISKQERDMNEDTFKGDVVSWVTPLGLPVTQPYRKFGTTMVKTVLQTVQVEMGHDKHPANSKRQRSAFPPNFVHSLDSTHMLLTAVKMDRMGIDFTAVHDSYWSHACNVDVMNDTLRGCFVDLYSQPILENLREDFITRYPNINFPEIPDRGELNLELVRQSAYFFN 899          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: F0XZ85_AURAN (DNA-directed RNA polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ85_AURAN)

HSP 1 Score: 667 bits (1722), Expect = 3.600e-221
Identity = 399/907 (43.99%), Postives = 530/907 (58.43%), Query Frame = 0
Query:  284 LPYSTLRQMQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVWANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAKGNDGVPTVRACLRIAELVQAEVNLVRMK----KKL-------GKKRLPVEISSHR-------HVREINKKAQIVLDVPKNTEWPAGAKVKLGAALIKLLIETACWTHDKDRGVVTPWDKGVDRMAGRGDAEEVPAPQPAFLHNVVTVNNRRQGSLSLAPEIFSKM-VDEDISRLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRAL--ARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLPPVPEGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNASMHSLRCDMKIKASIAKEFRGHV-IYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEASTVPPEDATEAELEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFFN 1168
            L    L + QL+ E+++ + AC  Y  M+E+L+++GKG  LKP++RL+  WY  L   I  E+ A               G   G L  YGPLL++L  ++ AVL MH  + L L  G  G         + E VQAE  +++++    ++L       GK+ +P      R       HV  +N +A+  L+   +T+WP   + KLG+AL+  L++ A     KD       D G                 P   H +V  N R+ G +    E+ S     E I R A PRF+PMLV P  W   D+GGFLRL +  MRT G A Q  A   AR     +   L+ +GKV W +NG + D V           DLP  EDL LP        +   +  A  + DG+E+      +K + A+ R   ++K++NA +HSLRCD  +K SIA++F+     YFPYN+DFRGR YP+PPNLN LG+D  R +L F EA+ LG+ GL+WL++H+ANL+G  K S DDR AF  A+   +RD+  RP+DG  WW  AD PWQ LA C +L  A +  DP  Y   LPVH DGSCNGLQHYAALG D +GG QVNL+P + P+DVY GV  +V +KVA  A+        EA LE  R+A++VDGLI RKVVKQTVMTSVYGVTFVGAR+QI   L       T+A  V     E ++   A YVA+ T++VLEELFT AR+ M WL   A+L+S  GQP+SWITPLGLPV+QPYRR     V+TL Q V + ++SDKLP+SV RQ +AFPPNFVHSLDS+HM++TAVEM+  G+ F AVHDSYW HA +V  MN  LR CF++LY  P+LE L ES ++RYP  +FPP+P RG L +  V  + YFF+
Sbjct:   68 LERHALYERQLELEEETLEAACADYEAMIEDLLSLGKGAELKPVQRLMAQWYEPLVTRITAERKATL------------DGDKGGDLRIYGPLLLLLPPEQLAVLTMHTTIGLCLKHGPLGAKYSNLVTTLGETVQAEARVLKLRNLRRERLKAAEDAEGKRAVPKTFLDARALARLPTHV--VNSRAKRALEEGDDTDWPTITRAKLGSALVMALLDVA-----KD-------DAG----------------SPLLEHTIVYSNARKIGIIRAKDELLSHARCPETIRRAAMPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQMEAFRNARGIEGGVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQEDLALP--------EPMDLAEALARADGDEDGG----KKLYDAHLRRSARLKRRNAELHSLRCDTLLKLSIAEQFKDEAAFYFPYNVDFRGRAYPVPPNLNHLGSDVCRAMLTFAEAKRLGDDGLFWLRIHLANLFGLSKKSLDDRAAFAVAHEADIRDAYERPMDGNMWWLEADEPWQALAACRELARAAELDDPRDYECALPVHADGSCNGLQHYAALGRDHEGGRQVNLLPGEAPRDVYEGVRALVAEKVARAAT------GDEA-LETVRLAQIVDGLITRKVVKQTVMTSVYGVTFVGARQQILGRL-------TDAGDVD----EAELYLCACYVARLTLEVLEELFTSARHIMGWLAQCARLVSLHGQPVSWITPLGLPVVQPYRRDGQHAVKTLAQTVLLVDNSDKLPVSVTRQKSAFPPNFVHSLDSSHMLMTAVEMDHRGLAFTAVHDSYWTHAADVATMNSTLRHCFLELYEAPLLEKLLESFELRYPDTDFPPLPPRGDLDIAKVLDADYFFS 902          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A7S2UNM4_9STRA (DNA-directed RNA polymerase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNM4_9STRA)

HSP 1 Score: 644 bits (1661), Expect = 3.430e-209
Identity = 389/1000 (38.90%), Postives = 571/1000 (57.10%), Query Frame = 0
Query:  250 ADEAYAEDDFVDPLMENRDAGKYDGVGEATDSVELP-YSTLRQMQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVWANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAKGNDGVPTVRACLRIAELVQAEVNLVRM-KKKLGKKRLP-------------------VEISSHR-----------------------HVREI----------NKKAQIVLD---------VPKNTEWPAGAKVKLGAALIKLLIETACWTHDKDRGVVTPWDKGVDRMAGRGDAEEVPAPQPAFLHNVVTV-NNRRQGSLSLAPEIFSKMVDEDI---SRLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLPPVPEGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEK---VKQKNASMHSLRCDMKIKASIAKEFRGHV-IYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEAST-----------VPPEDATEAELEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFF 1167
            +DE+ +E+  V P +E +     D +      VE+P +S L  +QL  E  S +E+  KY + +++         +  ++R +  WY  LK+ IE EQ    +  K   K           +++YGP L  L+++K AV+  H+ +  IL+ G++ +P V   L+I   ++AEVN+ R+ ++++   + P                   V+I S                         H+++           NKK +I +D         +  + EWP   K+KLG  L+K L++ A                   ++ G G+ +E      AF++      +N+  G + L  +++  ++++D+   S +AT    PM++PP DW  P+ GG+  +  ++MRT G  +Q+ AL  ++L  +Y  LN LGKV W IN  IL     C  + I +GD+P   +  +P  P       R   +     D +E E +K     + AYR    K   +KQKN  ++SLRC   +K + A  F+    IYFPYN+DFRGR YPIPP+L+ +G+D SRGVL F + +PLG +GLYWLKVH+ANL G DK+SF+ R  F E +MD VR + + PL  + WW   D P+Q LA C ++  A+DS DP  Y   LPVH DGSCNGLQHYAALG D  GG  VNL  +D PQDVY GV   V ++VA EA             + P D   A L ++R AK+V GLIDR VVK+TVMTSVYGVTF+GAR+QIQ    +K+ +K E  G   +E+ D+I  A +Y+AK TM+V+ ELF  AR TMNWL + A+LIS++GQP++WI+P+G+P +QPYR++  F V TLLQ V + ++SD LP+  +RQ TAFPPN+VHSLDS+HM+LTA+EM++ G+ F+AVHDS+W H  ++D MN  LR+ F++LY  P+LENL  + ++RYP++EFP +PERGTL L+DV+ + YFF
Sbjct:  174 SDESSSEE--VRPPVEAKSHSMADLLERFNPEVEMPPHSNLEDVQLWLECDSQRESVLKYERTIQDARQRKDFASMSSVQRQVLNWYETLKDRIETEQLNYLSADKKTRKD----------MHSYGPYLCALQSEKIAVICSHQAMLAILSSGSNRIPVVTIALKIGTAIEAEVNVQRLLRQRMDASQRPEKDPKDEDKKESVDEHTDSVDIESKTDHGLSELKDTPMGLSKRWSYGASHLQQFIDESSRNEVGNKKTRIRIDRANQRALRLLNSSEEWPKTHKIKLGCTLVKFLLDDA-------------------KVRGEGNKQE-----DAFVYEKERKGHNKFMGVVGLNDQLYKLIMEDDVDVFSSMATHNR-PMVIPPRDWTDPNDGGYCAVKVELMRTNGCRSQREALQESNLDSVYDGLNVLGKVPWVINKEILRVAHDCWENNIPLGDIPTQTNYNVPDQPI------RPERQTDLVLDDKESETYKASVMEYKAYRESTRKFLRMKQKNMDLNSLRCSTMLKLNQADLFQDFENIYFPYNLDFRGRAYPIPPHLSNVGSDLSRGVLKFSKKKPLGPRGLYWLKVHLANLAGADKMSFEKRAEFTEKHMDSVRAAVMDPLGEDRWWTTLDDPFQGLATCHEIVNAIDSGDPATYEGSLPVHMDGSCNGLQHYAALGRDTIGGKAVNLCKADGPQDVYIGVMHEVIRRVAEEAKRELDFDHSNIDDLNPSDL--AALRKNRAAKLVHGLIDRGVVKRTVMTSVYGVTFIGARQQIQ----EKITEKLEEKGADVDELTDEIYSACSYLAKETMEVMGELFVGARQTMNWLASCARLISQQGQPVAWISPIGVPAVQPYRQSRQFTVVTLLQSVVLTDNSDDLPLHSQRQVTAFPPNYVHSLDSSHMLLTALEMDRRGLTFSAVHDSFWTHPADIDEMNKVLRETFIELYDQPLLENLKRTWELRYPSLEFPELPERGTLNLEDVRDAPYFF 1124          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A7S2HVI8_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVI8_9STRA)

HSP 1 Score: 623 bits (1606), Expect = 1.430e-207
Identity = 335/664 (50.45%), Postives = 433/664 (65.21%), Query Frame = 0
Query:  520 PAFLHNVVTVNNRRQ-GSLSLAPEIFSKMVDEDISRLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLP-LPPVPEGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNASMHSLRCDMKIKASIAKEFRGHVIYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALE---ASTVPPEDATEAELEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISK----------KGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFFN 1168
            PAF H  +      + GS+ ++   + ++   +   LA  R +PM+VPP  W+R D+GG+L + ++IMRT G  A   AL  ADL ++   LN L K+ WR+N  +LD        ++A+ +LP   D+P L P+                    EEE+     RKRHY  ++   K+ + N  +HS RCD  +K +IA+E R +VIYFPYN+DFRGR YPIPPNLN LG+D  RG+L F++ +PLGEKGL+WLKVH+ANLYG DK +F+DR+ F   +M +V DSA RPL+G  WW  A+SPWQ LAVC +LT AL  P+P  + S +PVH DGSCNGLQHYAALG D +GGA VNL P  +PQDVY  VC IV  K+  +   A T   E+ TE     HR AK + G++DRKV+KQTVMTSVYGVTFVGAR+QI   L +K ++    +G+  +EV+ +   A+ Y+A+HT++ L+ELF  AR+ M WL   AQLISK          KG  +SW+TPLGLPV QPYR+     V+T+LQ V V    DK P + KRQ +AFPPNFVHSLDSTHM+LTAV+M++ G+ F AVHDSYW HA NVD+MND LR CFVDLYS PILENL E    RYP I FP IP+RG L L+ V+ S YFFN
Sbjct:    8 PAFRHETIQAKYAHKVGSVIMSDCAYEELCGTEHKPLAQIRDLPMVVPPQPWLRWDKGGYLSVPTKIMRTHGYRAHSDALRVADLDQVLAGLNALNKLPWRVNHEVLDVAREAWDQRMAIAELPERTDIPELEPL-------------------SEEEDADPLIRKRHYWQQK---KIIRNNCELHSQRCDTILKLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKVHLANLYGFDKANFNDRMQFTMDHMSEVYDSAARPLEGNRWWTKAESPWQVLAVCKELTEALSHPNPEAFESGMPVHMDGSCNGLQHYAALGRDVEGGASVNLTPHHEPQDVYMEVCAIVNHKIDEDFSRAMTTASEELTE----DHRFAKRLKGMVDRKVIKQTVMTSVYGVTFVGARRQIMGQLEEKFIE----AGMHPDEVDREAYAASGYLARHTLEALKELFGGARDIMEWLGTCAQLISKQERDMNEDTFKGDVVSWVTPLGLPVTQPYRKFGTTMVKTVLQTVQVEMGHDKHPANSKRQRSAFPPNFVHSLDSTHMLLTAVKMDRMGIDFTAVHDSYWSHACNVDVMNDTLRGCFVDLYSQPILENLREDFITRYPNINFPEIPDRGELNLELVRQSAYFFN 641          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A7S2WL48_9STRA (DNA-directed RNA polymerase n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WL48_9STRA)

HSP 1 Score: 640 bits (1650), Expect = 1.070e-206
Identity = 386/973 (39.67%), Postives = 552/973 (56.73%), Query Frame = 0
Query:  287 STLRQMQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAA-VWANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAKGNDGVPTVRACLRIAELVQAEVNL-----------VRMKKKLG---------KKRLPVEISSH---------------------------------------------------RHVREINKKAQIVLDVPKNTEWPAGAKVKLGAALIKLLIETACWT---HDKDRGVVTPWDKGVDRMAGRGDAEEVPAPQPAFLHNVVTVN-NRRQGSLSLAPEIFSKMVDEDISRLA--TPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLPPVP----EGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNASMHSLRCDMKIKASIAKEFRGHV-IYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEASTVPPEDATEAE---------LEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFF 1167
            ++L+ +QL  E +S +E+  KY K++ +  +      L  ++  L  WY  L++ IE EQ   +  N  ++N +  K+      L  YGP L ML+ +K AV+  HE     L KG DG   V    RI + V+AEVN+            R KK +            +L V+  +H                                                   R +  +N++AQ +L+     EW    KVKLGAALI++L  TA        + +  +TP + G+                PAF+H +  +  N+  G + L  + +  +V++ I  LA  T R  PM+VPP +W  P +GG+  L   +MRT G   Q+ AL  ADL  ++  LN LG++ W IN  IL     C  + + +GD+P   D P+PP P    +   VD         K    E + F+E   RH   RR++    Q+N  + SLRC   +K + A++F+    IYFPYN+DFRGR YP+PP+L+ +G+D  RG+L F E++PLG +G YWLKVH+ANL G DK+SFDDR +F + +M+ VR S   P   + WW   D P+Q LA C ++  A+DS DP  Y   LPVH DGSCNGLQHYAALG D  GG  VNL  S++PQDVY+GV   V K+VA EA T    DA++ E         L+++R +K+VDGLIDR VVK+TVMTSVYGVT++GARKQIQ  + +K+ +K    G   +E+E++I  A  Y+A  TM+V+ ELFT AR TMNWL + A+LIS +GQP++W++P+G+P +QPYR+   + + TLLQ V +   +D LP+   RQ +AFPPN+VHSLD++HM+ TA+EM++ G+ F+AVHDS+W H G++D MN  LR+ FVDLY  P+LE+L  + ++RYP++EFP IPERG L L++VK + YFF
Sbjct:  258 TSLQDLQLWYECESQRESVAKYEKVIADARSREDYASLSTVQHQLLRWYHPLRKRIEDEQELFIKGNSNNENLTKNKT-----DLYRYGPYLCMLQPEKLAVITAHEATINALQKGGDGSTLVAMASRIGDAVEAEVNVQKYLRKHMLNQARNKKNMAATSESQEESNDKLNVDYQTHTTNEKMIVDDASNEKNGTEYNKEVDGWMYGLSHLQRFMDDMNKKNPGKKTRRRISIVNRRAQKLLE--SKEEWSNVDKVKLGAALIEMLSNTATLDFSPQQRHKEYLTPAEGGL----------------PAFMHEIRWLKENKSVGHVVLNDQFYKMIVEDKIESLAAYTTRHKPMIVPPREWTGPKEGGYSALKVDLMRTHGCKIQQDALYEADLSTVFDGLNVLGRIPWNINKLILGVAQKCWDESVVLGDIPSRNDFPVPPTPIPPEQNDEVDYDDKDSEAYKFAIAEYKSFREATIRH---RRII----QRNMDLRSLRCSALLKLNQAEKFKDFDNIYFPYNLDFRGRAYPVPPHLSNVGSDLCRGMLTFSESKPLGPRGHYWLKVHLANLAGADKMSFDDRASFTDNHMENVRASVNDPFGEDRWWMTLDEPFQGLATCHEIVNAIDSGDPDSYECSLPVHMDGSCNGLQHYAALGRDRVGGKAVNLCSSNKPQDVYSGVMKEVIKRVAEEAKTDLDFDASDIENLSKAQRNELKRNRASKLVDGLIDRGVVKRTVMTSVYGVTYIGARKQIQEKIEEKLGEK----GYDVDEMENEIHSACGYLASVTMEVMGELFTGARETMNWLASCARLISSQGQPVAWMSPIGVPAVQPYRQKKPYTIITLLQAVVLTNSTDNLPLHKARQVSAFPPNYVHSLDASHMLFTAIEMDRRGLTFSAVHDSFWTHPGDIDEMNLILRESFVDLYDRPLLEDLKRTWELRYPSLEFPDIPERGDLDLNEVKEAPYFF 1196          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A7S2K4X0_9STRA (DNA-directed RNA polymerase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4X0_9STRA)

HSP 1 Score: 621 bits (1602), Expect = 4.050e-203
Identity = 372/962 (38.67%), Postives = 541/962 (56.24%), Query Frame = 0
Query:  292 MQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVWANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAKG-------ND--------GVPTVRACLRIAELVQAEVNLVRMKKKLGKKRL---------PVE--------------------ISSHRHVREINK--------------------------KAQIVLDVPKNTEWPAGAKVKLGAALIKLLIETACWTHDKDRGVVTPWDKGVDRMAGRGDAEEVPAPQPAFLHNVVTVNN--RRQGSLSLAPEIFSKMVDEDIS--RLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLPPVPEGVIVDGRGMLRAPTKQD-GEEEEDFKERRKRHYAYRRLVEKVK---QKNASMHSLRCDMKIKASIAKEFRGH-VIYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEASTV----PPEDATEAE---LEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFF 1167
            MQL  E QS++E   ++   +         T +  ++R L  WY   KE+IE EQ      +  +   + + G        Y P L+ LKADK A++V HEVV ++L  G       ND        GV  +   ++IA+ V+AEV + R+  KL + R          P+E                        + +R++                            KA+    +  + +WP   K+K G  L+++L++TA         ++TP     D   G          QPA  +  + +      QG +S+   ++   V++     R    R+ PM+VPP ++  P++GG+  L   +MRT G   QK AL R+DL  IY  L+ L KV W I    L+    C  + I +GD+P   D+ +P  PE          R P  ++  +E   + E R++  AY   V K +   QKN  + SLRC   +K   A++F+    ++FPYN+DFRGR YPIPP+LN LG+D SRG+L F EA+PLG++GLYWLKVH+ANL G DK+SFDDR+ + E+N+D +R SA  P  GE WW   + P+Q LA C ++  A+DS DP+ Y+S LPVH DGSCNGLQHYAALGLD  GG  VNL+  D+PQDVY GV + V ++V  EA+      P ++ ++ E   +++++ AK+V G IDR VVK+TVMTSVYGVTF+GAR QI+    +K+       G   +E+E++I  A++Y+A  TM+V+ +LFT AR T NWL   A+LIS +G P++W+TPLG+P +QPYR   +  V+T+LQ V +    D LP+   RQ +AFPPN+VHSLD+THM++T +EM++ G+ F AVHDS+W HA ++D MN  LR CFVDLYS P+LE L ++ ++RYP +EFPP+P++G + L  V +S YFF
Sbjct:    1 MQLWYECQSYRETVLEFEAELNSARERHDYTSISAVKRQLLYWYTPFKEAIEAEQLKC---LNGEKGIESRQG--------YAPFLLTLKADKLAIIVTHEVVGMLLRSGGGAYDFMNDRDKAKRGGGVKLITLAMKIADAVEAEVAVERVLAKLAEDRKKLRESMGNQPIEKEEISDTEVDHAKDSSETEATGEKKELRKVGNPYSAMAFEQFLPTTEKDTKSSTMTRAKAKAKYILQNDYDWPPNLKIKFGVILLQMLMDTA--------KMITP-----DEFNG----------QPAIHYEKIVMGRTLELQGYVSVNERLYQLAVEDKFEGFRPFATRYQPMIVPPDNYTSPNRGGYKALDVFVMRTSGCREQKNALRRSDLGDIYRGLDALAKVPWVIQKENLEVAQRCWEEGIVIGDIPQKTDVEVPEAPE----------RPPKPENMTKEHPGYDEYRQKLQAYITAVSKYRKAAQKNMDLRSLRCSALLKLEQAEKFKDFDEVFFPYNLDFRGRVYPIPPHLNHLGSDLSRGLLTFAEAKPLGDRGLYWLKVHLANLAGADKMSFDDRIKYAESNIDNIRSSAEDPFGGEMWWMSCEYPFQALATCREIIRAIDSGDPSTYMSALPVHMDGSCNGLQHYAALGLDVVGGKAVNLIGCDEPQDVYIGVMEEVIRRVDEEAARTVTFDPSQNLSKREKDAMKRNKAAKLVWGSIDRGVVKRTVMTSVYGVTFIGARNQIK----EKIEXXXXXKGENVDEMEEEIYSASSYLASVTMEVMGDLFTGARQTQNWLTDCARLISSRGHPVAWLTPLGVPAVQPYRHKKLHTVRTILQRVSLALSDDDLPLHKSRQVSAFPPNYVHSLDATHMLMTGMEMDRRGLTFTAVHDSFWTHAADIDEMNSVLRSCFVDLYSQPLLEELKKTWELRYPDLEFPPVPKKGEMDLRSVLNSSYFF 914          
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Match: A0A7S3QA78_9STRA (DNA-directed RNA polymerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QA78_9STRA)

HSP 1 Score: 625 bits (1613), Expect = 2.740e-201
Identity = 380/957 (39.71%), Postives = 550/957 (57.47%), Query Frame = 0
Query:  292 MQLDREDQSHQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVWANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAKGNDGVPTVRACLRIAELVQAEVNLVRM-KKKLGKKR------------------------LPVEISSH---------------------------RHVREINK-------KAQIV------LDVPKNTE-WPAGAKVKLGAALIKLLIETA---CWTHDKDRGVVTPWDKGVDRMAGRGDAEEVPAPQPAFLHNVVTVN-NRRQGSLSLAPEIFSKMVDEDISRL--ATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALARADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLPPVPEGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNASMHSLRCDMKIKASIAKEFRG-HVIYFPYNMDFRGRTYPIPPNLNILGADFSRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKVRDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQDGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEASTVPPEDATEAELEQ--------HRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQIQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEARNTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVHVREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVHDSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIPERGTLVLDDVKSSKYFF 1167
            +QL  E  + QE+ +KY  ++         T +  ++R L +WY  L+  I   Q   ++  + KNK          G N YGP L  L+ +K A++  HE   + L KG  G   +   ++I E V+AEVN+ ++ ++++ + R                        +P  +++                            R V E+N+       K +I       + + ++TE W +  KV LGA LI++L++TA      ++   G +     G ++             QPAF +       N+  G + +  + +  +V++  S L  +T R  PM++PP +WV P +GG+  L ++ MRT G   Q+ AL  ADL  I   LN LGKV W+IN  I+   LTC  D I +GD+P  ED  LPP P  V  DG         ++GE E  F+  R+    YRR    + QKN  + S R    +K + +++F+    IYFPYN+DFRGR YP+PP+L+ +G+D  RG+L F E++PLG KGLYWLKVH+ANL G DK++FD R  F E NM+ VR  A  PL+   WW G D P+Q LA C ++  A+DS +P +Y   LPVH DGSCNGLQHYAALG D  GG  VNL   D PQDVY+GV + V K+VA EA  +   DAT  +L +        HR A + +GLIDR VVK+TVMTSVYGVT++GA+KQIQ    +K+ +K EA G   +E++ +I  A  Y+A+ TM V+ +LF+ AR TMNWL   A+LIS +GQP++WI+P+G+P +QPYR+   + V TLLQ V +  D+  LP+  +RQ +AFPPN+VHSLDS+HM+LTA+EM++ G+ F+AVHDS+W HA ++D MN  LR+CFVDLY+ P+LE L ++ +++YP++EFP +PE G + LD+VK + YFF
Sbjct:  274 VQLWLECSAQQESVEKYEAIVNSARDREDFTSMGTVQRQLLSWYNPLRTKILTLQEEYFSKER-KNK----------GANRYGPFLCALQPEKLAIITTHEATMVALKKGGGGATLMSMAMKIGEAVEAEVNVQKLLRRRMMQNRRDNADFKANKDDESIASNNNVSVSVPEAVAAQEEEKADKFSSDKKENDIDWMYRPAHLQRFVEELNRLDPSRKGKVRIARANRRAMQLLESTEPWTSADKVVLGAVLIQMLLDTARVSIGNNNFTPGNLEEMHSGNNKYG-----------QPAFTYEQKWKGINKLVGHVVMNEDFYQMVVNDKFSSLDNSTTRHKPMVIPPKEWVSPTEGGYSVLKTEFMRTHGCEVQRNALREADLSTIMDGLNVLGKVPWKINKEIMSLALTCWNDGITLGDIPSREDFYLPPHP--VRPDGNSS----DYKEGEGE--FRRYREALIKYRR----INQKNLDLRSRRGSALLKLNQSEQFKDFQKIYFPYNIDFRGRAYPVPPHLSNIGSDLCRGMLTFAESKPLGPKGLYWLKVHLANLAGNDKITFDQRADFTEKNMENVRACAEDPLENR-WWMGLDDPFQGLAACHEIVKAIDSGNPEEYECSLPVHMDGSCNGLQHYAALGRDRVGGKAVNLCNYDTPQDVYSGVMEEVIKRVADEAERIIDIDATRDDLTKKEKEALTDHRAAVLTNGLIDRGVVKRTVMTSVYGVTYIGAKKQIQ----EKIEEKLEAKGYDIDEMDTEIYSACGYLARITMDVMGDLFSGARQTMNWLATCARLISSQGQPVAWISPIGVPAVQPYRQRQPYTVVTLLQTVVLINDNANLPVHKQRQASAFPPNYVHSLDSSHMLLTALEMDRRGLTFSAVHDSFWTHACDIDEMNGVLRECFVDLYTRPLLEELKKTWELQYPSLEFPDLPETGDMDLDEVKHAPYFF 1191          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig992.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU39_9PHAE0.000e+072.25DNA-directed RNA polymerase n=2 Tax=Ectocarpus Tax... [more]
A0A836CEF2_9STRA2.040e-26046.49DNA-directed RNA polymerase n=1 Tax=Tribonema minu... [more]
A0A4D9D3J6_9STRA2.540e-23944.40DNA-directed RNA polymerase n=2 Tax=Monodopsidacea... [more]
A0A7S2HVK7_9STRA2.160e-22543.27DNA-directed RNA polymerase n=1 Tax=Dictyocha spec... [more]
F0XZ85_AURAN3.600e-22143.99DNA-directed RNA polymerase n=1 Tax=Aureococcus an... [more]
A0A7S2UNM4_9STRA3.430e-20938.90DNA-directed RNA polymerase n=1 Tax=Attheya septen... [more]
A0A7S2HVI8_9STRA1.430e-20750.45DNA-directed RNA polymerase n=1 Tax=Dictyocha spec... [more]
A0A7S2WL48_9STRA1.070e-20639.67DNA-directed RNA polymerase n=2 Tax=Eucampia antar... [more]
A0A7S2K4X0_9STRA4.050e-20338.67DNA-directed RNA polymerase n=1 Tax=Leptocylindrus... [more]
A0A7S3QA78_9STRA2.740e-20139.71DNA-directed RNA polymerase n=1 Tax=Chaetoceros de... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029262DNA-directed RNA polymerase, N-terminalSMARTSM01311RPOL_N_2coord: 291..615
e-value: 6.2E-44
score: 161.9
IPR029262DNA-directed RNA polymerase, N-terminalPFAMPF14700RPOL_Ncoord: 293..615
e-value: 1.2E-63
score: 215.6
NoneNo IPR availableGENE3D1.10.150.20coord: 869..1075
e-value: 5.1E-65
score: 221.3
NoneNo IPR availableGENE3D1.10.287.280coord: 761..837
e-value: 2.5E-30
score: 106.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..71
NoneNo IPR availablePANTHERPTHR10102:SF0DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 223..1168
IPR002092DNA-directed RNA polymerase, phage-typePFAMPF00940RNA_polcoord: 761..1168
e-value: 4.5E-160
score: 533.1
IPR002092DNA-directed RNA polymerase, phage-typePANTHERPTHR10102DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 223..1168
IPR002092DNA-directed RNA polymerase, phage-typePROSITEPS00900RNA_POL_PHAGE_1coord: 847..858
IPR002092DNA-directed RNA polymerase, phage-typePROSITEPS00489RNA_POL_PHAGE_2coord: 926..940
IPR037159DNA-directed RNA polymerase, N-terminal domain superfamilyGENE3D1.10.1320.10coord: 277..614
e-value: 4.8E-57
score: 195.5
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 286..1168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig992contigP-littoralis_Contig992:34463..52076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig992.7.1mRNA_P-littoralis_Contig992.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig992 34244..53263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig992.7.1 ID=prot_P-littoralis_Contig992.7.1|Name=mRNA_P-littoralis_Contig992.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1169bp
MHTVGARLRARWTLSVSGGRARVRRRCAFVFEDGPTARSIPPRPRRRNPP
CTNSSSSSSRGMATSATTVSKSSVNRASEVAFVSRGEAGAEDGGGRRVLA
ITDADFPRVLNGPAPGYAEDALRRLALATLPGERANAFVGPVRGRNRRGA
LKKAPVAISRATEDGSGGVNGVPRIEPCPFKRVPGLEGYVGAALSEGVLS
ENIEEDEEEQARTFDVQTIGHLSNYTNGGANGEAESQRWPRQQPFSSSAA
DEAYAEDDFVDPLMENRDAGKYDGVGEATDSVELPYSTLRQMQLDREDQS
HQEACDKYTKMMEELMTMGKGTHLKPIERLLTTWYPALKESIEREQAAVW
ANIKDKNKSDVKSGGSFGGLNTYGPLLVMLKADKQAVLVMHEVVNLILAK
GNDGVPTVRACLRIAELVQAEVNLVRMKKKLGKKRLPVEISSHRHVREIN
KKAQIVLDVPKNTEWPAGAKVKLGAALIKLLIETACWTHDKDRGVVTPWD
KGVDRMAGRGDAEEVPAPQPAFLHNVVTVNNRRQGSLSLAPEIFSKMVDE
DISRLATPRFVPMLVPPSDWVRPDQGGFLRLHSQIMRTRGEAAQKRALAR
ADLRKIYHSLNCLGKVRWRINGHILDTVLTCLRDKIAVGDLPVGEDLPLP
PVPEGVIVDGRGMLRAPTKQDGEEEEDFKERRKRHYAYRRLVEKVKQKNA
SMHSLRCDMKIKASIAKEFRGHVIYFPYNMDFRGRTYPIPPNLNILGADF
SRGVLVFDEARPLGEKGLYWLKVHVANLYGEDKVSFDDRVAFVEANMDKV
RDSALRPLDGECWWKGADSPWQCLAVCTDLTAALDSPDPTKYLSCLPVHQ
DGSCNGLQHYAALGLDAKGGAQVNLVPSDQPQDVYTGVCDIVKKKVALEA
STVPPEDATEAELEQHRIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARKQ
IQSVLGDKMVKKTEASGVPSEEVEDDIRKAAAYVAKHTMKVLEELFTEAR
NTMNWLKAVAQLISKKGQPMSWITPLGLPVLQPYRRTNMFQVQTLLQGVH
VREDSDKLPISVKRQTTAFPPNFVHSLDSTHMMLTAVEMEKAGVPFAAVH
DSYWVHAGNVDLMNDQLRQCFVDLYSGPILENLHESLQMRYPTIEFPPIP
ERGTLVLDDVKSSKYFFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029262RPOL_N
IPR002092DNA-dir_Rpol_phage-type
IPR037159RNA_POL_N_sf
IPR043502DNA/RNA_pol_sf