prot_P-littoralis_Contig990.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig990.16.1
Unique Nameprot_P-littoralis_Contig990.16.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length487
Homology
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BLAST of mRNA_P-littoralis_Contig990.16.1 vs. uniprot
Match: D8LR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR75_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 6.750e-39
Identity = 159/309 (51.46%), Postives = 174/309 (56.31%), Query Frame = 0 
Query:    1 MQDDDSWLDAFSANAGLFFDNNTSSVSDLYGPLLAGDISPGMTTGSSSDPGQVATMPMPLMPSPAPKTQNNVINTPAARLPIPAMDFAALVGHQQXXXXXXXXXPHVQVVQVAHRPTTLVAAAPAPVSEEIPRTFMQSQFNTLPRQQQHRQGMEITAGAVPAVSARGRGRAPVLRSKPAAAAIALPTTXXXXXXXXXXXXXXXXXFTDDEQGVPNQRGGESFTRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANPSASAATSLIPIRGPRRAAVVACSAELVRDLISTCVALRTENASISERLSVAL 309
            MQDDD W  AFS NAGLFFD         +GPLL GD +      ++     V  MP            +                         XXXXXXXXXPHV+V Q+A RP+TLVAA                           RQ  +I  G  P  SAR +   P       AA       XXXXXXXXXXXXXXXXX      G PNQRGGESF+RKRDRAKLLRQQMNDGLDNLHEALVEISTSGAN SASAATSLIP RGPRRAAVVACSA LVRDLISTC+ALR + AS+S R + AL
Sbjct:    5 MQDDDLWRRAFSTNAGLFFDEQAD-----FGPLLTGDDTAAALIAAAGVADPVVGMP------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHVRV-QIACRPSTLVAAXXXXXXXXXXXXXXXXXXXXXXXX--XRQQRKI--GPAPE-SARSKANLP-------AALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLSARFAEAL 283
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BLAST of mRNA_P-littoralis_Contig990.16.1 vs. uniprot
Match: A0A6H5JYB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB8_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 6.060e-37
Identity = 84/98 (85.71%), Postives = 89/98 (90.82%), Query Frame = 0 
Query:  212 GVPNQRGGESFTRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANPSASAATSLIPIRGPRRAAVVACSAELVRDLISTCVALRTENASISERLSVAL 309
            G PNQRGGESF+RKRDRAKLLRQQMNDGLDNLHEALVEISTSGAN SASAATSLIP RGPRRAAVVACSA LVRDLISTC+ALR + AS+  RL+ AL
Sbjct:   41 GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLLARLAEAL 138
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig990.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR75_ECTSI6.750e-3951.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYB8_9PHAE6.060e-3785.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig990contigP-littoralis_Contig990:53181..60209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig990.16.1mRNA_P-littoralis_Contig990.16.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig990 53153..63356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig990.16.1 ID=prot_P-littoralis_Contig990.16.1|Name=mRNA_P-littoralis_Contig990.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=487bp
MQDDDSWLDAFSANAGLFFDNNTSSVSDLYGPLLAGDISPGMTTGSSSDP
GQVATMPMPLMPSPAPKTQNNVINTPAARLPIPAMDFAALVGHQQQQQQQ
QQQQPHVQVVQVAHRPTTLVAAAPAPVSEEIPRTFMQSQFNTLPRQQQHR
QGMEITAGAVPAVSARGRGRAPVLRSKPAAAAIALPTTAAVASTPATSAS
EEPPPFTDDEQGVPNQRGGESFTRKRDRAKLLRQQMNDGLDNLHEALVEI
STSGANPSASAATSLIPIRGPRRAAVVACSAELVRDLISTCVALRTENAS
ISERLSVALAAKAGLQQQQQHSQQQRGTSATEGSPLVGRQLEGQEAPMSL
CPRRFSASCCPCRSSASSGRGLSGKVGRCRVIGGTSARGIATGATCVCHA
GGLDPSGVMRRSGASFPRRERATAIAWLGRSFPPRRPRRPGDRSTAAFTG
TCGFRRGRCPPRTWSSARASNRESLSGSRSAGGATA*
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