prot_P-littoralis_Contig982.14.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig982.14.2
Unique Name	prot_P-littoralis_Contig982.14.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	435

Homology

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 720 bits (1859), Expect = 5.310e-256
Identity = 355/435 (81.61%), Postives = 392/435 (90.11%), Query Frame = 0

Query:    2 GQNKLTVRQRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFETTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDK-DAAALDDLCDMVKKMSM 435
            GQNKLT  QRL++VR VQ G+QRSKVA  +GV  +YI+KLMKP+++A L KSRD E+NLDA RTPTPV+ DLE RL QWIK+AR RFETTK+GLSG+MIQTQAT+FAS+M   DFTAS GWLHRFL RYGF HINLHGEAGDVD+ K E +IAKIREQLE FDVELIFNMDETGLF+RCFPRGTYVTRAE AAGVN+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVI TAK+PMVFRH+R+ P PYY+QQSAWLDS++CQRWFDEVFVPFVKK TGKKVVLLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMG+LFALK QYKTEMV RLA LI+ WD VRARKIRRGCRGL+DAGQATMLDVTEIL +KWESFS QT++RCWLKA ILPREHE+ALKG+DTRLDREDK D A +DDLC+MV KMSM
Sbjct:  166 GQNKLTTGQRLQLVRDVQAGKQRSKVAATYGVTTSYISKLMKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIIDDLCEMVSKMSM 600

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 676 bits (1743), Expect = 2.190e-240
Identity = 329/395 (83.29%), Postives = 360/395 (91.14%), Query Frame = 0

Query:   42 MKPERIASLEKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFETTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDK-DAAALDDLCDMVKKMSM 435
            MKP+++A L KSRD E+NLDA RTPTPV+ DLE RL QWIK+AR RFETTK+GLSG+MIQTQAT+FAS+M   DFTAS GWLHRFL RYGF HINLHGEAGDVD+ K E +IAKIREQLE FDVELIFNMDETGLF+RCFPRGTYVTRAE AAGVN+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVI TAK+PMVFRH+R+ P PYY+QQSAWLDS++CQRWFDEVFVPFVKK TGKKVVLLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMG+LFALK QYKTEMV RLA LI+ WD VRARKIRRGCRGL+DAGQATMLDVTEIL +KWESFS QT++RCWLKA ILPREHE+ALKG+DTRLDREDK D A +DDLC+MV KMSM
Sbjct:    1 MKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIIDDLCEMVSKMSM 395

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 639 bits (1647), Expect = 3.620e-225
Identity = 318/430 (73.95%), Postives = 357/430 (83.02%), Query Frame = 0

Query:   10 QRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFETTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVP---LAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKD-AAALDDLCDMVKKMSM 435
            QRL IV+ VQGG +RS VA  + VG +YI+KLM PE+IA LEK RDME+N DA R P PV+ ++E +L +WIKIAR RF+ TK+G+SG MIQ QA + A+ M  T+F A+NGWL+RFL RY F H+ LHGEAGDVD+ K   EI +IREQL+EFDV+ IFNMDE GLF+RCFPRGTYVTR E AAGVN KTARGSKAMKAKDRCTVVACCNTTGSL VP   LAVI T+K PMVFRHVRKPPCPY+AQ SAWLD++ICQRWFDEVFVPFVK  T KKV LLWDNCPGHKIK++DPQIVIIFLPPNV SV+QPM+MG+LF LK QYKTEMV RLA LIEDWDTVRARKI+RGCRGLSDAGQATMLDVTEI  QKW SF  QT++RCWLKA ILPREH   LKG DTRLDREDKD AA +D LCDM  KMSM
Sbjct:    3 QRLHIVKEVQGGAKRSMVAAKWNVGTSYISKLMNPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARARFDATKMGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVDFIFNMDEMGLFFRCFPRGTYVTRGEAAAGVNSKTARGSKAMKAKDRCTVVACCNTTGSLMVPFXPLAVISTSKKPMVFRHVRKPPCPYFAQSSAWLDAAICQRWFDEVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPMNMGILFVLKCQYKTEMVARLADLIEDWDTVRARKIQRGCRGLSDAGQATMLDVTEICSQKWRSFDVQTVIRCWLKAGILPREHCKVLKGMDTRLDREDKDDAAIIDGLCDMATKMSM 432

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE)

HSP 1 Score: 594 bits (1532), Expect = 1.090e-205
Identity = 326/561 (58.11%), Postives = 369/561 (65.78%), Query Frame = 0

Query:    2 GQNKLTVRQRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFE---------------------------------TTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRG--------------------------------------------------------------------------------------------TYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPY--YAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKDAAALDDLCDMVKKMSM 435
            G+NKLT+ QR +IV AV+GG+QRSKVA D+ VGKAY++KLMKP  IA+LEK+RD+E+N+ AKRTPTP++A+LE                                                TTKLGLSG+MIQTQAT+FA++MNVT+FTASNGWLHRF  RYG  HINLHGEAGDV++  AE+EIA+IREQLE FDVELIFNMDETGLF+RCFPRG                                                                                            TYVTR+EGAAG+N+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLA+IHTAKDPMVFR VRKP CPY  YAQ+SAWLDS++CQRWFDEVFVPFVKK TGKK+ LLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMG+LFALK QYKT+M++R                     GL+DAGQ TMLDVTEIL QKWESFSDQT++RCWLKATILP EHE ALK  DTRLDRED  AAALDDL DMV+KMSM
Sbjct:  120 GENKLTIAQRWKIVEAVRGGRQRSKVAADYNVGKAYVSKLMKPPMIAALEKARDIELNMGAKRTPTPIHAELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKLGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFFSRYGLVHINLHGEAGDVNKAAAEKEIAQIREQLEGFDVELIFNMDETGLFHRCFPRGMYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHXEGFDVELIFNMDETGLFYRCFXXXXXXXXXXXXXXXXXXPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHTAKDPMVFRQVRKPACPYLYYAQKSAWLDSALCQRWFDEVFVPFVKKTTGKKMALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKCQYKTKMLMR---------------------GLNDAGQPTMLDVTEILSQKWESFSDQTVIRCWLKATILPGEHESALKDNDTRLDREDPGAAALDDLYDMVEKMSM 659

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE)

HSP 1 Score: 525 bits (1352), Expect = 1.800e-182
Identity = 264/346 (76.30%), Postives = 287/346 (82.95%), Query Frame = 0

Query:   90 TTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKDAAALDDLCDMVKKMSM 435
            TTKLGLSG+MIQTQA + A++MNVT FTASNGWLHRFL RYG  HINLHGEAGDV++  AE++IA+IREQLE FDVELIFNMDETGLF+RC         + GA G+N+K ARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRH                      RWFD+VFVPFVKK TGKKV LLWDNCPGH+IKNDDPQIVIIFLPPNV SVFQPMDMG+LFALK QYKTEMV+RLAALIEDWDT RAR+IR GCRGL+DAGQ TMLDVTE+L QKWESFSDQT++RCWLKATI P EHE ALK  DTRLDRED  A ALDDLCDMV+KMSM
Sbjct:    3 TTKLGLSGIMIQTQAPKLAAEMNVTHFTASNGWLHRFLSRYGLVHINLHGEAGDVNKAAAEKKIAQIREQLEGFDVELIFNMDETGLFHRC---------SRGAPGLNQKNARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRH----------------------RWFDKVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPMDMGILFALKCQYKTEMVMRLAALIEDWDTARARQIRTGCRGLNDAGQPTMLDVTEVLSQKWESFSDQTVIRCWLKATIRPGEHESALKDNDTRLDREDPGATALDDLCDMVEKMSM 317

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5JV34_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV34_9PHAE)

HSP 1 Score: 516 bits (1330), Expect = 1.810e-178
Identity = 262/380 (68.95%), Postives = 291/380 (76.58%), Query Frame = 0

Query:   89 ETTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDV---------------------------------DRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKDAAALDDLCDMVKKMSM 435
            +TTKLGLSG+MI+TQAT+FA+++NVT+FTAS+GWLHRFL RYG  HINLHGEAGD                                  ++  AE+EIA+I EQL+ FDVELIFNM+ETGLF+RCFPRGTYVTR+E AAG+N+KTARGSKAMKAKDRCTVV+CCNTTGSLKVPLAVIHTAKDPMVFRHVRKP CPYYAQ+S WLDSS+CQRWFDEVFVPFVKK TGKKV LLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMG                                   CRGL++AGQ TMLDVTEIL QKWESF DQT++RCWLKATILP EHE ALK +DTRLDRED  AAALDDLCDMV+KMSM
Sbjct:    2 QTTKLGLSGIMIRTQATKFAAEINVTNFTASDGWLHRFLSRYGLVHINLHGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAAAEKEIAQIWEQLQGFDVELIFNMEETGLFHRCFPRGTYVTRSESAAGLNQKTARGSKAMKAKDRCTVVSCCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYAQKSGWLDSSLCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMG-----------------------------------CRGLNEAGQPTMLDVTEILSQKWESFLDQTVIRCWLKATILPGEHESALKDKDTRLDREDPWAAALDDLCDMVEKMSM 346

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5KFG9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG9_9PHAE)

HSP 1 Score: 499 bits (1286), Expect = 7.030e-173
Identity = 253/364 (69.51%), Postives = 284/364 (78.02%), Query Frame = 0

Query:   50 LEKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFETTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRL 413
            L K+  ME+N +A+R P PV A+LE R+ +WIKIA++RF TTK+GLSG MIQ +A +FAS+M +    ASNGWLHR L R    HINLHGEAGDVD+ K + +IA+  EQL EFDVE IFNMDET LFYRCFPRGTYVTR E AAGVNK TARGSKAMKA                 VPLAVI TA +PMVFR VR+ PCPYYAQ SAWLD+S+CQRWFDEVFVPFVK  T +KV L WDNCPGHKI N+DPQIVIIFLPP VTSVFQPMDMG LF LK Q K EMV+RL+ +IEDWDTVRAR I RGC+GLSDAGQAT LDV EIL QKWESFSDQT+VRCW KATILP EHE+  K +DTRL
Sbjct:   16 LNKAVQMELNPEARRVPEPVEAELEQRVLKWIKIAQERFMTTKIGLSGTMIQHRAVKFASEMGIK-LAASNGWLHRSLKRCQLKHINLHGEAGDVDQEKVQEKIAQTEEQLNEFDVEFIFNMDETALFYRCFPRGTYVTRQEDAAGVNKNTARGSKAMKAX----------------VPLAVIGTAANPMVFRKVRELPCPYYAQASAWLDASLCQRWFDEVFVPFVKSKTARKVTLTWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPMDMGALFTLKCQNKPEMVVRLSDVIEDWDTVRARNIPRGCQGLSDAGQATTLDVAEILTQKWESFSDQTVVRCWPKATILPEEHENVFKRKDTRL 362

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE)

HSP 1 Score: 482 bits (1241), Expect = 3.360e-167
Identity = 245/370 (66.22%), Postives = 281/370 (75.95%), Query Frame = 0

Query:   10 QRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFETTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQK 379
            QRL+IV+ VQ G +RS VA  + VG +YI+KLM PE+IA LEK R ME+N DA R P                        TK+G+SG MIQ QA +  + M   +F A+NGWLHRFL RY F H+ LHGEAGDVD+ K   EI +IR+ L+EFDVE IF+MDETGLF+RCFPRGTYVT+ E AAGVN +T RGSKAMKAKDRCTVVACCNT GSL VPLAVI T+K  +VFR VRKPPCPY+AQ SAWLD++I QRWFDEVFVPFVK  T  KV LLWD  PGHKIK++DPQIV+IFLPPNV SV+QPM MG+L  LK QYKTEMV RLA LIEDWDTVRAR+++RGCRGLSDAGQ TMLDVTEI  QK
Sbjct:    3 QRLKIVKEVQWGAKRSMVAAKWNVGASYISKLMNPEKIAELEKIRHMELNQDALRAPKTA---------------------TKIGVSGSMIQAQALKIVAQMGKNNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIRKHLQEFDVEFIFDMDETGLFFRCFPRGTYVTKGEAAAGVNSETVRGSKAMKAKDRCTVVACCNTAGSLMVPLAVISTSKKRVVFRLVRKPPCPYFAQDSAWLDAAIYQRWFDEVFVPFVKGKTSTKVALLWDKGPGHKIKSNDPQIVVIFLPPNVPSVYQPMGMGILLVLKRQYKTEMVARLADLIEDWDTVRARQLQRGCRGLSDAGQVTMLDVTEICSQK 351

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5K549_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K549_9PHAE)

HSP 1 Score: 467 bits (1202), Expect = 1.490e-159
Identity = 258/454 (56.83%), Postives = 304/454 (66.96%), Query Frame = 0

Query:   27 VAQDFGVGKAYI-TKLMKPERIASLEKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFET-------------------------------------TKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKP------PCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKD-AAALDDLCDMVKKMSM 435
            V   + VG +YI +KL+ PE+IA LEK RDME+N DA R P PV+ ++E +L +WIKIAR+R                                        TK+G+SG MIQ QA + A+ M   +F A+NGWLHRFL RY F ++ L G+AGDVD+ K   EI +IREQL+EFDVE IFNMDE GLF+RCFPRGT+VTR + AAGVN KTARGSKAMKAKDRCTVVACCNT GSL VPLAVI T++  M+FRHVRK       P    A++S     ++         +PFVK  T KK  LLWDNCPGHKI+++D Q+VII LPPNVTS++QP DMG+LF LK QYK E+V RLA LIEDWDTVRARK +RGCRGLSDAGQATMLDVTEI  QKW                ILPREH + LKG DTRLDRE KD AA +D LCDMV KMSM
Sbjct:    2 VGAKWNVGTSYIISKLVDPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARERSNVSTYLALVMCWSGYNLVVYTPTPFRPYTSSHSRPSCWATKIGVSGSMIQAQALKIAAQMGKANFKATNGWLHRFLKRYSFTYVQLRGKAGDVDKQKVAEEIERIREQLQEFDVEFIFNMDEMGLFFRCFPRGTHVTRGQAAAGVNSKTARGSKAMKAKDRCTVVACCNTIGSLMVPLAVISTSRKSMIFRHVRKTAMSLLRPGECLARRSHL--PAVTSSRTGTPSIPFVKGKTSKKEALLWDNCPGHKIESNDSQVVIILLPPNVTSIYQPTDMGILFVLKCQYKAEVVARLADLIEDWDTVRARKTQRGCRGLSDAGQATMLDVTEICSQKWH---------------ILPREHCNVLKGMDTRLDREAKDDAAIMDGLCDMVSKMSM 438

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BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Match: A0A6H5JYC6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC6_9PHAE)

HSP 1 Score: 461 bits (1187), Expect = 3.300e-157
Identity = 244/332 (73.49%), Postives = 254/332 (76.51%), Query Frame = 0

Query:    2 GQNKLTVRQRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFETTKLGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKT 333
            G+NKLTV QRL+IVRAVQGGQQRSKVA DFGVGKAYITKLMKPE IASLEKSRDME+NLDAKRTPTPV+A LEARLNQWIKIARQRFE                                                                      LE FDVELIFNMD+TGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKD+CTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLD+SICQRWFDEVFVPFVK+NTGKKV LLW+NCPGH+IKNDDPQIVIIFLPP VTSVFQPMDMGVLFALK QYKT
Sbjct:  198 GKNKLTVGQRLQIVRAVQGGQQRSKVAGDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFE----------------------------------------------------------------------LEGFDVELIFNMDQTGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDQCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKENTGKKVALLWNNCPGHEIKNDDPQIVIIFLPPKVTSVFQPMDMGVLFALKCQYKT 459

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig982.14.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JV64_9PHAE	5.310e-256	81.61	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JEY2_9PHAE	2.190e-240	83.29	HTH CENPB-type domain-containing protein n=2 Tax=E...	[more]
A0A6H5JNS8_9PHAE	3.620e-225	73.95	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KA74_9PHAE	1.090e-205	58.11	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JLK3_9PHAE	1.800e-182	76.30	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JV34_9PHAE	1.810e-178	68.95	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KFG9_9PHAE	7.030e-173	69.51	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5K051_9PHAE	3.360e-167	66.22	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5K549_9PHAE	1.490e-159	56.83	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JYC6_9PHAE	3.300e-157	73.49	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 146..166
None	No IPR available	GENE3D	1.10.10.60		coord: 71..130 e-value: 1.6E-13 score: 52.7
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 7..351
None	No IPR available	PANTHER	PTHR19303:SF17	TIGGER TRANSPOSABLE ELEMENT-DERIVED PROTEIN 7	coord: 7..351
IPR006600	HTH CenpB-type DNA-binding domain	SMART	SM00674	cenpb	coord: 67..136 e-value: 2.9E-9 score: 46.8
IPR006600	HTH CenpB-type DNA-binding domain	PFAM	PF03221	HTH_Tnp_Tc5	coord: 70..134 e-value: 2.1E-11 score: 43.6
IPR006600	HTH CenpB-type DNA-binding domain	PROSITE	PS51253	HTH_CENPB	coord: 61..136 score: 12.463826
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 146..395 e-value: 3.1E-8 score: 35.3
IPR004875	DDE superfamily endonuclease domain	PFAM	PF03184	DDE_1	coord: 210..392 e-value: 2.3E-33 score: 115.3
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 64..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig982	contig	P-littoralis_Contig982:83998..85828 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig982.14.2	mRNA_P-littoralis_Contig982.14.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig982 83998..85828 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig982.14.2 ID=prot_P-littoralis_Contig982.14.2|Name=mRNA_P-littoralis_Contig982.14.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=435bp
LGQNKLTVRQRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASL
EKSRDMEVNLDAKRTPTPVNADLEARLNQWIKIARQRFETTKLGLSGLMI
QTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAE
REIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKT
ARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCP
YYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDD
PQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVR
ARKIRRGCRGLSDAGQATMLDVTEILPQKWESFSDQTIVRCWLKATILPR
EHEDALKGRDTRLDREDKDAAALDDLCDMVKKMSM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006600	HTH_CenpB_DNA-bd_dom
IPR036397	RNaseH_sf
IPR004875	DDE_SF_endonuclease_dom
IPR009057	Homeobox-like_sf