prot_P-littoralis_Contig979.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig979.1.1
Unique Nameprot_P-littoralis_Contig979.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1009
Homology
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: D7FJ86_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ86_ECTSI)

HSP 1 Score: 923 bits (2386), Expect = 0.000e+0
Identity = 571/923 (61.86%), Postives = 632/923 (68.47%), Query Frame = 0
Query:    7 ATAVPARETVLPLELEGISDERREQLELRRQREMARLQESQASTGNFRWSPIAMIPAHLCVLIFLIFLLEKLEGSLDWPWAAVLSPLWITDALFIVIKSKELRKILRTSVHVTSETYALFPPLGGIIDHLGVAAAKVTLAYRLEGNVDWSLLLLFTPMWICVMLAGTLRCITPSQPQVMGEQVLLHRAGSFFTGLFHLVARGAQPMLIVLKLDGQVDGPWSAVFVPLWVFMGAIALAGSALCCCAPMVSRGVIPEIRPLLIRGMLLCSVGTFSLTFCALLFLVFLTLDLNKTENFSARTILAPLIALYALILVFLPLLLLVTRHYVATMRTAEEHFRQANDPNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSXXXXXXXXXXXXXXXXXXXXXXXAERRRLRNNRGSSVMAPTILMRESSTLFRRASESLCRRLGEADGSYLDPDVSAFD-------LADWSRTSGASRVREPSGDIEEGVDGGGAA----LPPQRTCGSFDVLQE--------VSRRGKRLSAVVMGTSNREGHKRFWMSAGS--SRSEMERSPRQAGEEEAAAKDTPEDDRHDQCLLPGDSGTHSVTDSFDLDSYGSYVDPDEENHEVGLSIDGDDXXXXXXXXG---APDATPHAPSVLPAAALPADILLGFGSVHGATAFSLRGGSGCGHGPSRTAAIAVAGGP-----------GVGRHRWGSGHDTGRRRGGGGGLRAGVDGRMPRRLSWPGMMSSVPAPAKVGGGPEGPLRGDDGGAAVAAHGVETG-GGCAGGGGSG---------LGLMAGQPTCYICCERTADAVAMECGHGGVCFTCATHLADTPPHTCPVCRLPIQEILKLHEIGEFGRVVAVPASEEAXXXXXXXXXXXXVEATAVA----SLGGELKEPEDDARPACSGEAGVG 880
            AT   A  T+LPLEL  ISDERREQLELRRQREMAR QES++ TG+FRWSPIAMIPAHLCVL+FL+FLLEKLEG + WPWAAVLSPLWITDA+FIVIKSKELRKILRT+VHV SETYALFPPLGGIIDHLGVAAAKVTLAYRLEG VDWSLLLLFTPMW CV+LAGTLRCITP  PQV+ E   LHRAG+FFTGLFHLVARGAQP+LIVLK+DGQ++GPWS+VF+PLW+FMGAIAL GSALCCCAP VSRGVIPEIRPLLIRGMLLCSVGTFSL FCALLFLVFLTL+L+  ENFS RTILAPLIALYALILVFLPLLLLVTRHYV TMRTAEE FRQANDPNGG                                XXXXXXXXXXXXXXXXXXXXX               VMAPTILMRESS LFRRAS S CRRLGEADGS ++PDV+AF+       LADW R  G  R R+   DI    DGGG+       PQR+  SF VLQ+        V R G+R +A V G+S+REGH+RF +S+G   + +E E SPR  GE+ A +K TPEDDRHDQCLLPGDSGTHSVTDS+DL+S+GS+VD DE++HEVGLSIDGD+       X    A D +    S+      P +ILLGFGS HGA AFSL GGSG GHG    +                      RHRW +   T  RRG G  +  G  G MPRRLSWPG +S         GG E  +      AAV A   E G GG A GG SG                 TCYICCER ADAV MECGHGGVCFTCAT LAD+PPH CPVCR  IQE+ KLHEI EFGRVV VP +                 ATA       +GGELK PE +  P  +  A VG
Sbjct:    2 ATTTRAATTILPLELGDISDERREQLELRRQREMARQQESRSGTGSFRWSPIAMIPAHLCVLVFLVFLLEKLEGGIGWPWAAVLSPLWITDAVFIVIKSKELRKILRTTVHVPSETYALFPPLGGIIDHLGVAAAKVTLAYRLEGKVDWSLLLLFTPMWACVLLAGTLRCITPPHPQVIAEHASLHRAGAFFTGLFHLVARGAQPVLIVLKVDGQLEGPWSSVFIPLWMFMGAIALGGSALCCCAPTVSRGVIPEIRPLLIRGMLLCSVGTFSLAFCALLFLVFLTLELDNNENFSPRTILAPLIALYALILVFLPLLLLVTRHYVRTMRTAEEQFRQANDPNGGGGMDASSTAFGGVDDVEAGRGVRGSPPIGGAEXXXXXXXXXXXXXXXXXXXXX---------------VMAPTILMRESSMLFRRASASFCRRLGEADGSLMNPDVTAFEVRFRAVELADWGRRGGRFRSRDS--DIAAIDDGGGSEERGERVPQRSSRSFHVLQDCFPHARGAVRRGGQRFTAAVTGSSSREGHERFSVSSGRQLAGAEKEGSPRPRGEDGATSKRTPEDDRHDQCLLPGDSGTHSVTDSYDLNSFGSFVDSDEDSHEVGLSIDGDEEDEPRDGXXXXXAIDGSSFHESLPATTTEPPEILLGFGSAHGAAAFSLHGGSGSGHGLCHGSXXXXXXXXXXXXXXXXXXLATSRHRWSAERGTSSRRGAGSSIHGGAGG-MPRRLSWPGELSLASV-----GGDEVDV------AAVTASDAEAGRGGVATGGSSGPLXXXXXXXXXXXREHSTCYICCERRADAVMMECGHGGVCFTCATTLADSPPHLCPVCRKVIQEVFKLHEIREFGRVVVVPPASGGEVAVATA-------ATAATPRRGGIGGELKVPESEGDPPTASNAAVG 888          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: A0A7S2USS3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USS3_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.110e-42
Identity = 115/318 (36.16%), Postives = 166/318 (52.20%), Query Frame = 0
Query:   46 SQASTGN---------FRWSPIAMIPAHLCVLIFLIFLLEKLEGSLDWPWAAVLSPLWITDALFIVIKSKELRKILRTSVH-----VTSETYALFPPLGGIIDHLGVAAAKVTLAYRLE---GNVDWSLLLLFTPMWICVMLAGTLRCITPSQPQVMG---EQVLLHRAGSFFTGLFHLVARGAQPMLIVLKLDGQVDGPWSAVFVPLWVFMGAIALAGSALCCCAPMVSRGVIP--EIRPLLIRGMLLCSVGTFSLTFCALLFLVFLTLDLNKTENFSART-ILAPLIALYALILVFLPLLLLVT-RHYVATMRTAE 339
            +QA  GN          R  PI  I  HL  L+F+I +L KLE  LDW WAAV +PLW TD  F+ IK  E+++            V  +  A+  P  G+++H  VA  K+ L   LE   G   + L LLF P+W  V  +  +RC  PS  Q      +   LHR  +   G FH ++R  QP+LI  K+D  + G W +VF P W+ +  +      +   AP++SR  +   E+R LL+R M LCS+ TF++     +FL  L   L    + ++ T IL P+I LY+LI+VFLP+L+L + R++ AT R  E
Sbjct:   13 TQAENGNGSRNIADDPLRMPPI--IAGHLLDLVFVIIILLKLEEILDWNWAAVFAPLWGTDVCFMFIKIVEVKRSASALARHSGDGVGDKLGAILIPAFGMLEHAAVAVTKILLVMFLEDQGGVSKYPLTLLFLPIWASVTSSSFIRCCLPSPAQRQNRTAQPAALHRCSALVAGTFHFLSRALQPLLITTKIDNFLSGDWWSVFTPAWILLCVMLCISVIVGNTAPLISRHQLEATEVRILLVRMMFLCSLVTFTVAIFGFMFLYNLCRKLEGGRDTASITQILIPVIILYSLIMVFLPMLILASQRYHRATQRLVE 328          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: A0A836CE73_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE73_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.670e-16
Identity = 74/231 (32.03%), Postives = 113/231 (48.92%), Query Frame = 0
Query:   23 GISDERREQLELRRQREMARLQESQASTGNFRWSPIAMIPAHLCVL-IFLIFLLEKLEGSLDWPWAAVLSPLWIT---DALFIVIKSKELRKILRTSVHVTSETYALFPPLGGIIDHLGVAAAKVTLAYRLEGNVDWSLLLLFTPMWICVMLAGTLRCITPSQPQVMGEQVLLHRAGSFFTGLFHLVARGAQPMLIVLKLDGQVDGPWSAVFVP--LWVFMGAIALAGSAL 247
             +S ERRE+L  R  REM    ++  S   + WS +A I A L +  +FLI LL KL+   + PW  V  P+WIT    A+  V++    R+  R + H     Y  F     +  ++ V  + + L   +  +V W ++L+  P+W+  +   T   + P  P +       +R   +   LFHL A G Q  LI  K+DG + G WS VF+P  L + +  IALAG+ L
Sbjct:    8 NLSAERRERLLNRANREM---HDANLSEPRYWWSGVATITAELLLYDLFLILLLVKLDMDPELPWFVVALPIWITITQAAIRDVVRYTLRREAARMTAH-----YLAFRIGHDVCINVAVLTSVLRLGGAIPASVPWVVVLV--PLWVDAVACSTYLALAPVPPHLDDVAARDYRGNMWNAALFHLGAFGLQAGLIATKVDGILHGSWSNVFIPAFLALIVLVIALAGTTL 228          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: A0A7S3JUI3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUI3_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.420e-9
Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:  770 CYICCERTADAVAMECGHGGVCFTCATHLADTPPHTCPVCRLPIQEILKL 819
            CYIC     DAV MECGH GVCF+CA  LA   P +CP+CR PI  +LKL
Sbjct:  430 CYICYVAPRDAVLMECGHAGVCFSCAQKLAVRHPRSCPICRQPISTVLKL 479          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: A0A7S4F120_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F120_CHRCT)

HSP 1 Score: 69.3 bits (168), Expect = 8.300e-9
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0
Query:  769 TCYICCERTADAVAMECGHGGVCFTCATHLADTPPHTCPVCRLPIQEILKLH----------EIGEF 825
            TC+ICC  TADAV ++CGHGG+C+ CA       PH CP+CR  I+ + ++           EIGEF
Sbjct:  244 TCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARVAPTENPDIFECEIGEF 310          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: A0A7S4BGL3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL3_CHRCT)

HSP 1 Score: 69.3 bits (168), Expect = 1.240e-8
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0
Query:  769 TCYICCERTADAVAMECGHGGVCFTCATHLADTPPHTCPVCRLPIQEILKLH----------EIGEF 825
            TC+ICC  TADAV ++CGHGG+C+ CA       PH CP+CR  I+ + ++           EIGEF
Sbjct:  294 TCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARVAPTENPDIFECEIGEF 360          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: A0A7S4BGL5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL5_CHRCT)

HSP 1 Score: 69.3 bits (168), Expect = 2.660e-8
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0
Query:  769 TCYICCERTADAVAMECGHGGVCFTCATHLADTPPHTCPVCRLPIQEILKLH----------EIGEF 825
            TC+ICC  TADAV ++CGHGG+C+ CA       PH CP+CR  I+ + ++           EIGEF
Sbjct:  532 TCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARVAPTENPDIFECEIGEF 598          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: A0A7S3UUS7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUS7_HETAK)

HSP 1 Score: 62.8 bits (151), Expect = 1.490e-6
Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  770 CYICCERTADAVAMECGHGGVCFTCATHLADTPPHTCPVCRLPIQEILKL 819
            C IC ER  DAVA++CGHGG+C++CA  +A      CP+CR P+++++K+
Sbjct:  265 CLICFERAPDAVAVDCGHGGLCYSCAVDVACVHD-VCPMCRAPMRQVVKI 313          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: UPI0020142BFD (LOW QUALITY PROTEIN: neuralized E3 ubiquitin protein ligase 1Ab n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020142BFD)

HSP 1 Score: 63.2 bits (152), Expect = 1.840e-6
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0
Query:  770 CYICCERTADAVAMECGHGGVCFTCATHLADTPPHTCPVCRLPIQEILKLH 820
            C+ICCERT D+V   CGH  VC  C   L +    +CP+CR PI++I+K++
Sbjct:  451 CFICCERTVDSVLYTCGHMCVCSVCGGKLTEMSNPSCPMCRSPIRDIIKIY 501          
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Match: A0A0M0J2X5_9EUKA (Putative e3 ubiquitin-protein ligase log2-like protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J2X5_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 1.880e-6
Identity = 25/50 (50.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:  770 CYICCERTADAVAMECGHGGVCFTCATHLADTPPHTCPVCRLPIQEILKL 819
            C+IC     DAV +ECGHGG+CF CAT         CP+CR PI +I++L
Sbjct:  402 CFICYSGPRDAVLLECGHGGLCFGCATRCMQMRFQECPICRQPISQIVQL 451          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig979.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ86_ECTSI0.000e+061.86RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2USS3_9STRA4.110e-4236.16Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A836CE73_9STRA2.670e-1632.03RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3JUI3_9STRA4.420e-960.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4F120_CHRCT8.300e-944.78Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BGL3_CHRCT1.240e-844.78Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BGL5_CHRCT2.660e-844.78Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3UUS7_HETAK1.490e-648.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI0020142BFD1.840e-647.06LOW QUALITY PROTEIN: neuralized E3 ubiquitin prote... [more]
A0A0M0J2X5_9EUKA1.880e-650.00Putative e3 ubiquitin-protein ligase log2-like pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..49
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 769..815
e-value: 6.8E-11
score: 41.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 861..880
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 471..491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 528..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..569
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 963..983
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 769..820
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 770..809
e-value: 2.7E-4
score: 30.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 770..810
score: 10.999225
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 763..824
e-value: 1.0E-10
score: 42.7
IPR019396Transmembrane Fragile-X-F-associated proteinPFAMPF10269Tmemb_185Acoord: 216..321
e-value: 5.0E-8
score: 33.0
IPR019396Transmembrane Fragile-X-F-associated proteinPANTHERPTHR13568FAM11A, B PROTEINcoord: 201..319
coord: 65..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig979contigP-littoralis_Contig979:9599..22530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig979.1.1mRNA_P-littoralis_Contig979.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig979 8983..22716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig979.1.1 ID=prot_P-littoralis_Contig979.1.1|Name=mRNA_P-littoralis_Contig979.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1009bp
MMATQRATAVPARETVLPLELEGISDERREQLELRRQREMARLQESQAST
GNFRWSPIAMIPAHLCVLIFLIFLLEKLEGSLDWPWAAVLSPLWITDALF
IVIKSKELRKILRTSVHVTSETYALFPPLGGIIDHLGVAAAKVTLAYRLE
GNVDWSLLLLFTPMWICVMLAGTLRCITPSQPQVMGEQVLLHRAGSFFTG
LFHLVARGAQPMLIVLKLDGQVDGPWSAVFVPLWVFMGAIALAGSALCCC
APMVSRGVIPEIRPLLIRGMLLCSVGTFSLTFCALLFLVFLTLDLNKTEN
FSARTILAPLIALYALILVFLPLLLLVTRHYVATMRTAEEHFRQANDPNG
GGGGGGGADGSSRSFGVDVDNDDDDADAAGGRSAGGDGEVAGGGSSAIPG
PGEGGGAERRRLRNNRGSSVMAPTILMRESSTLFRRASESLCRRLGEADG
SYLDPDVSAFDLADWSRTSGASRVREPSGDIEEGVDGGGAALPPQRTCGS
FDVLQEVSRRGKRLSAVVMGTSNREGHKRFWMSAGSSRSEMERSPRQAGE
EEAAAKDTPEDDRHDQCLLPGDSGTHSVTDSFDLDSYGSYVDPDEENHEV
GLSIDGDDGHDGGDGGGAPDATPHAPSVLPAAALPADILLGFGSVHGATA
FSLRGGSGCGHGPSRTAAIAVAGGPGVGRHRWGSGHDTGRRRGGGGGLRA
GVDGRMPRRLSWPGMMSSVPAPAKVGGGPEGPLRGDDGGAAVAAHGVETG
GGCAGGGGSGLGLMAGQPTCYICCERTADAVAMECGHGGVCFTCATHLAD
TPPHTCPVCRLPIQEILKLHEIGEFGRVVAVPASEEAARGGGGGGGGGGV
EATAVASLGGELKEPEDDARPACSGEAGVGSTTEASVAAAPGSEFANRTS
GDGVVAATVAAGDARTRPRGGGGGGGRMGSGAFRRFCGPGVVGVSASATL
AGASSSGLAAEARRCGDPANGDGGGVETTSQREFPASAAAGRRSTLVEAQ
SMCDEGGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR019396TM_Fragile-X-F-assoc