prot_P-littoralis_Contig977.20.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig977.20.1
Unique Nameprot_P-littoralis_Contig977.20.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length325
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig977.20.1 vs. uniprot
Match: A0A6H5J557_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J557_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.850e-12
Identity = 62/195 (31.79%), Postives = 90/195 (46.15%), Query Frame = 0 
Query:   71 DGELPSGQQETDAWENLQDGLYYTWKKENEKVKMRNKRNKVAKNNPVVLTGGEGDQTLSG------------------ESTAAREKAQQQSIAEVAAARQGATADSQSAPISTVSGQATPIKKEGQGXXXXXXXXXXXXXXXGAGGDAQRARDVAK-FGDRPDDWMNPFSLAFVLFGRPAGEQEDVDLKCKVSGG 246
            DG+LPSG Q  D WENLQ  L++  ++   + K     N  AK+ P+VLTG +  +T +G                   S AA   A  +++A V AAR     D            A  +++   G                  GDA+   D+ + +G +P+ W++P SL F +FGRPAG  EDVDLK K++ G
Sbjct:  138 DGDLPSGMQAEDIWENLQLYLWFEDRRTAGRKKEVAAANARAKSQPIVLTGDDDGETEAGVEGAGAGEGGGKEAGPLGHSEAALRYATAKALARVEAARNNKGED------------ADVVEEIAAGIKPETADEEEGKEPEETAGDAETEDDLTRLYGPKPEHWLHPASLVFAIFGRPAGTNEDVDLKLKMTSG 320
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig977.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J557_9PHAE1.850e-1231.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig977contigP-littoralis_Contig977:61074..62383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig977.20.1mRNA_P-littoralis_Contig977.20.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig977 60844..64071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig977.20.1 ID=prot_P-littoralis_Contig977.20.1|Name=mRNA_P-littoralis_Contig977.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=325bp
MPQKGSDFCFARLTIPSTTRSSYYRASELGPSVSQCVGRRRHSMLARKFT
KGFLLSNPLRSVFVASFRTADGELPSGQQETDAWENLQDGLYYTWKKENE
KVKMRNKRNKVAKNNPVVLTGGEGDQTLSGESTAAREKAQQQSIAEVAAA
RQGATADSQSAPISTVSGQATPIKKEGQGGGGGTQEDEEDEDQDGAGGDA
QRARDVAKFGDRPDDWMNPFSLAFVLFGRPAGEQEDVDLKCKVSGGGKTG
AAATAAVEPGGAGVGSAAKAHGLGRHDLANLDGAGGGAGGQQSRAAVKKE
RYVANSEEKRAERVRPPLSLGPRP*
back to top