prot_P-littoralis_Contig974.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig974.1.1
Unique Nameprot_P-littoralis_Contig974.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length158
Homology
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5JWR4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR4_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.320e-26
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 0
Query:   12 DEVKRLVAQGTIMTLTNSKRLLVRRSSRVPVDRPNRNPGQYERLLGEEPVRTYVPLELRPWAMDCAHNEVVHLG 85
            DE+KRLV+QGT++ L NSK LLVR+  + P + PNRNPGQ+ER +GEEPVRTYVP  LRPW MDCAH E VHLG
Sbjct:  432 DELKRLVSQGTLLVLPNSKHLLVRKELKAPAENPNRNPGQFERWVGEEPVRTYVPRMLRPWVMDCAHKEAVHLG 505          
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5JKZ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ8_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 8.620e-18
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 0
Query:   40 VPVDRPNRNPGQYERLLGEEPVRTYVPLELRPWAMDCAHNEVVHLG 85
            +P +RPNRNPG+YERLLGEEPVRTYVP+ LRPW MDCAH E +HLG
Sbjct:    1 MPAERPNRNPGEYERLLGEEPVRTYVPMLLRPWVMDCAHKEAIHLG 46          
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5KAM4_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM4_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.220e-17
Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = 0
Query:   12 DEVKRLVAQGTIMTLTNSKRLLVRRSSRVPVDRPNRNPGQYERLLGEEPVRTYVPLELRP 71
            DE+KRLV+QGT++ L NSK LLVR+  + P + PNRNPGQ+ERL+GE+PVRTYVP  LRP
Sbjct:  512 DELKRLVSQGTLLVLPNSKHLLVRKELKAPAENPNRNPGQFERLVGEQPVRTYVPRMLRP 571          
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5J738_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J738_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.100e-16
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query:   80 EVVHLGWHLARVTQVV-ENEDPAKVTHTIKLMDLGRQLNVKLTERMLATDELRQEVGTWSWHVHITAKDVKKYLY 153
            + V  GW  A+V QV  E      + HTIKL+D+G+ +NV L E+ L TD L Q+ GTW WH H TAK VKKY++
Sbjct:    9 KTVKAGWQFAKVVQVTPEPRWEEGIKHTIKLVDIGKNINVALLEKNLTTDNLVQDPGTWCWHAHRTAKSVKKYMF 83          
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.130e-14
Identity = 38/57 (66.67%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    5 LPSSVVEDEVKRLVAQGTIMTLTNSKRLLVRRSSRVPVDRPNRNPGQYERLLGEEPV 61
            +P  V  D+VKRLVAQGTIM L +S++LLVRR++R P +RPNRNPGQ++RLLG+EPV
Sbjct:  634 IPEGVDIDDVKRLVAQGTIMVLADSRKLLVRRATREPSNRPNRNPGQFDRLLGDEPV 690          
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5KNM9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM9_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.350e-14
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:   80 EVVHLGWHLARVTQVV-ENEDPAKVTHTIKLMDLGRQLNVKLTERMLATDELRQEVGTWSWHVHITAKDVKKYLY 153
            + V  GW  A+V QV  E      + HTIKL+D+G+ +NV L E+ L TD L Q+ GTW WH H TAK +KKY++
Sbjct:  356 KTVKAGWQFAKVVQVTPEPRWEEGIKHTIKLVDIGKNINVALLEKNLTTDNLVQDPGTWCWHAHRTAKSIKKYMF 430          
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5L8N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8N7_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.870e-12
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
Query:  103 VTHTIKLMDLGRQLNVKLTERMLATDELRQEVGTWSWHVHITAKDVKKYLY 153
            + HT+KL+D+G+ +NV L E+ L TD L Q+ G W WH H TAK VKKY++
Sbjct:   21 IKHTVKLVDIGKNINVALLEKNLTTDNLVQDPGMWCWHAHRTAKSVKKYMF 71          
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5J755_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J755_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 4.730e-9
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   14 VKRLVAQGTIMTLTNSKR---------LLVRRSSRVPVDRPNRNPG-QYERLLGEEPVRTYVPLELRPWAMDCAHNEVVHLG 85
            +++L  + T++TL  S           LL+++ S  P  R  R+ G ++ERLLG+EPVR YVP  LRPWA++  H E  HLG
Sbjct:   16 IQKLADKCTLVTLPRSAPVGAKDAHHVLLIKKPSEAPTSRAQRHSGGKFERLLGDEPVRLYVPFLLRPWALNAVHTEGCHLG 97          
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Match: A0A6H5K3K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K5_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 3.710e-5
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   50 GQYERLLGEEPVRTYVPLELRPWAMDCAHNEVVHLG 85
            G++ERLLG+EP R YVP  LRPWA+   H E  HLG
Sbjct:  957 GKFERLLGDEPHRVYVPFLLRPWALGVVHKESGHLG 992          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig974.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JWR4_9PHAE1.320e-2668.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JKZ8_9PHAE8.620e-1878.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAM4_9PHAE2.220e-1766.67RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J738_9PHAE1.100e-1649.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRW3_9PHAE1.130e-1466.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KNM9_9PHAE2.350e-1448.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L8N7_9PHAE2.870e-1252.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J755_9PHAE4.730e-941.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3K5_9PHAE3.710e-561.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig974contigP-littoralis_Contig974:2281..4346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig974.1.1mRNA_P-littoralis_Contig974.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig974 1697..5404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig974.1.1 ID=prot_P-littoralis_Contig974.1.1|Name=mRNA_P-littoralis_Contig974.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=158bp
MWRKLPSSVVEDEVKRLVAQGTIMTLTNSKRLLVRRSSRVPVDRPNRNPG
QYERLLGEEPVRTYVPLELRPWAMDCAHNEVVHLGWHLARVTQVVENEDP
AKVTHTIKLMDLGRQLNVKLTERMLATDELRQEVGTWSWHVHITAKDVKK
YLYTHHE*
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