prot_P-littoralis_Contig972.11.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig972.11.2
Unique Nameprot_P-littoralis_Contig972.11.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length265
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig972.11.2 vs. uniprot
Match: A0A6H5KSP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSP8_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.680e-32
Identity = 74/146 (50.68%), Postives = 86/146 (58.90%), Query Frame = 0 
Query:    1 MSHASTGWPAPGPRLRLEAMPSFFVLFVDMASHAKCSGRCKNDRPLRNGTCRSVEGAAATPPTGGATAVAAVAAGS----------DGETRVVCIDVVCPYTRELVVEGLARRRGAWRVTTDSAEATLHWGDYEMIDWERVVSGEL 136
            M+HA+TGWP    RLR E  P F ++    +     S              R V G  ++   G ATA A   AG+          D E  V+C+DVVCPYTR LV+EGL RRRGAWRVT D+AEATLHWGDYEMIDWERVVSGEL
Sbjct:    1 MTHAATGWPTLDHRLRFEPTPCFSIISSGASPFQAPSSXXXXXXXXXXXXXRKV-GNNSSSGHGSATASAGTQAGAAGLGQGYTGHDDEIGVICVDVVCPYTRALVMEGLKRRRGAWRVTKDTAEATLHWGDYEMIDWERVVSGEL 145
[Close]
BLAST of mRNA_P-littoralis_Contig972.11.2 vs. uniprot
Match: D7G0H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H1_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.200e-29
Identity = 73/143 (51.05%), Postives = 83/143 (58.04%), Query Frame = 0 
Query:    1 MSHASTGWPAPGPRLRLEAMPSFFVLFVD----MASHAKCSGRCKNDRPLRNGTCRSVEGAAATPPTG---GATAVAAVAAGSDGETRVVCIDVVCPYTRELVVEGLARRRGAWRVTTDSAEATLHWGDYEMIDWERVVSGEL 136
            M HA+TGWP    RLR E  P F ++        A  +                  S  G+A T P G   GA  +     G D E  V+C+DVVCPYTR LV+EGL RRRGAWRVT D+AEATLHWGDYEMIDWERVVSGEL
Sbjct:    1 MIHAATGWPTLDHRLRFEPTPCFSIISSGASPFQAPSSXXXXXXXXXXXXXXXXXXSGHGSA-TAPAGTQAGAAGLGQGCTGYDDEIGVICVDVVCPYTRALVMEGLKRRRGAWRVTKDTAEATLHWGDYEMIDWERVVSGEL 142
[Close]
BLAST of mRNA_P-littoralis_Contig972.11.2 vs. uniprot
Match: A0A835ZQ42_9STRA (Tubulin-tyrosine ligase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ42_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.370e-13
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0 
Query:   78 GETRVVCIDVVCPYTRELVVEGLARRRGAWRVTTDSAEATLHWGDYEMIDWERVVSGEL 136
            G+   V +DV+CPYT  LV +  ARRR  WRVT DS++A LHWGDYE ++W+ +VSG +
Sbjct:   28 GDVSYVALDVLCPYTASLVHKAFARRRKRWRVTNDSSKAQLHWGDYECLNWDEIVSGRV 86
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig972.11.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KSP8_9PHAE1.680e-3250.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0H1_ECTSI1.200e-2951.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZQ42_9STRA2.370e-1354.24Tubulin-tyrosine ligase family-domain-containing p... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig972contigP-littoralis_Contig972:28477..70432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig972.11.2mRNA_P-littoralis_Contig972.11.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig972 28362..72105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig972.11.2 ID=prot_P-littoralis_Contig972.11.2|Name=mRNA_P-littoralis_Contig972.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=265bp
MSHASTGWPAPGPRLRLEAMPSFFVLFVDMASHAKCSGRCKNDRPLRNGT
CRSVEGAAATPPTGGATAVAAVAAGSDGETRVVCIDVVCPYTRELVVEGL
ARRRGAWRVTTDSAEATLHWGDYEMIDWERVVSGELTFDTVLLLRAAKEY
PVDRGGIVGARGAGGAGGGGGGAFVDEDPLAHITNTARQAEDETFREEDE
RFAESLPSSPHSPGASSTSAWTSWWTRTSRCGCSRPTRDPTSSRRVRGWS
TSSATSSRARCEYA*
back to top