prot_P-littoralis_Contig971.3.7 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig971.3.7
Unique Nameprot_P-littoralis_Contig971.3.7
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length117
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig971.3.7 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.070e-18
Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 0 
Query:   46 KGEGGKYDNVSCVLARTIRSNVDQEAAKLIGCTGMGNQCKRGQCFARAMQMFPGKGMDRIPTEVVLALLRH 116
            K    + DNVS VLART+R  +   AA+ IG +G GNQC+RG CFARAM MF GKGM+ IP +VVLALLR+
Sbjct:  153 KERDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig971.3.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE2.070e-1860.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig971contigP-littoralis_Contig971:4041..5047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig971.3.7mRNA_P-littoralis_Contig971.3.7Pylaiella littoralis U1_48mRNAP-littoralis_Contig971 4041..5536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig971.3.7 ID=prot_P-littoralis_Contig971.3.7|Name=mRNA_P-littoralis_Contig971.3.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=117bp
MRGASPEMGQDTPQPDDNLRQSTGLPRVTTTITTVSRQPGRAGSPKGEGG
KYDNVSCVLARTIRSNVDQEAAKLIGCTGMGNQCKRGQCFARAMQMFPGK
GMDRIPTEVVLALLRH*
back to top