prot_P-littoralis_Contig970.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig970.18.1
Unique Nameprot_P-littoralis_Contig970.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length44
Homology
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BLAST of mRNA_P-littoralis_Contig970.18.1 vs. uniprot
Match: A0A183UD35_TOXCA (Uncharacterized protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183UD35_TOXCA)

HSP 1 Score: 48.1 bits (113), Expect = 3.750e-5
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 MDLGTIKNKLLLGDYAKPEELFEDVSLMCENAVKFN 36
            MDLGTI+ K+    YA PEE+ EDV L+CEN  K+N
Sbjct:  432 MDLGTIRRKMEARQYANPEEMREDVLLVCENCFKYN 467
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BLAST of mRNA_P-littoralis_Contig970.18.1 vs. uniprot
Match: A0A0B2V038_TOXCA (Bromodomain-containing protein 2 n=2 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2V038_TOXCA)

HSP 1 Score: 48.1 bits (113), Expect = 3.750e-5
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 MDLGTIKNKLLLGDYAKPEELFEDVSLMCENAVKFN 36
            MDLGTI+ K+    YA PEE+ EDV L+CEN  K+N
Sbjct:  432 MDLGTIRRKMEARQYANPEEMREDVLLVCENCFKYN 467
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BLAST of mRNA_P-littoralis_Contig970.18.1 vs. uniprot
Match: F1KR80_ASCSU (Bromodomain-containing protein 2 n=3 Tax=Ascaris TaxID=6251 RepID=F1KR80_ASCSU)

HSP 1 Score: 47.0 bits (110), Expect = 9.620e-5
Identity = 20/36 (55.56%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 MDLGTIKNKLLLGDYAKPEELFEDVSLMCENAVKFN 36
            MDLGTI+ K+    YA PEE+ ED+ L+CEN  K+N
Sbjct:  419 MDLGTIRRKMEAKQYASPEEMREDLLLVCENCFKYN 454
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BLAST of mRNA_P-littoralis_Contig970.18.1 vs. uniprot
Match: A0A158PPH3_ANISI (Uncharacterized protein n=2 Tax=Anisakis simplex TaxID=6269 RepID=A0A158PPH3_ANISI)

HSP 1 Score: 47.0 bits (110), Expect = 9.620e-5
Identity = 20/36 (55.56%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 MDLGTIKNKLLLGDYAKPEELFEDVSLMCENAVKFN 36
            MDLGTI+ K+    YA P+EL ED+ L+CEN  K+N
Sbjct:  372 MDLGTIRRKMEARQYATPDELKEDILLVCENCFKYN 407
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig970.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A183UD35_TOXCA3.750e-558.33Uncharacterized protein n=1 Tax=Toxocara canis Tax... [more]
A0A0B2V038_TOXCA3.750e-558.33Bromodomain-containing protein 2 n=2 Tax=Toxocara ... [more]
F1KR80_ASCSU9.620e-555.56Bromodomain-containing protein 2 n=3 Tax=Ascaris T... [more]
A0A158PPH3_ANISI9.620e-555.56Uncharacterized protein n=2 Tax=Anisakis simplex T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..38
e-value: 4.7E-10
score: 39.4
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..43
score: 9.863
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..42
e-value: 1.5E-12
score: 49.2
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig970contigP-littoralis_Contig970:91988..92119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig970.18.1mRNA_P-littoralis_Contig970.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig970 91964..92119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig970.18.1 ID=prot_P-littoralis_Contig970.18.1|Name=mRNA_P-littoralis_Contig970.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=44bp
MDLGTIKNKLLLGDYAKPEELFEDVSLMCENAVKFNGNVSKGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf