prot_P-littoralis_Contig97.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig97.4.1
Unique Nameprot_P-littoralis_Contig97.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length92
Homology
BLAST of mRNA_P-littoralis_Contig97.4.1 vs. uniprot
Match: D8LP58_ECTSI (Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP58_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 2.200e-36
Identity = 68/91 (74.73%), Postives = 74/91 (81.32%), Query Frame = 0
Query:    1 MRFGTTPTSLWVAKECITKNRVDFANTLAPNVAVGEFIDSFEKAGITPHMAGRIRALTHDEFALNRKEHQAKKPLFIVEEAHMFTGIKYDA 91
            M  G T TSLWVAKE I KNRV F N LAPNVAVGEFIDSFE+AGITP +AG+IR LTHDEFALN+K  +  K L IV+EAHMFTGIKYDA
Sbjct:  171 MGSGKTLTSLWVAKEYIAKNRVKFVNILAPNVAVGEFIDSFERAGITPQIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIKYDA 261          
BLAST of mRNA_P-littoralis_Contig97.4.1 vs. uniprot
Match: Q8QNN8_ESV1K (EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNN8_ESV1K)

HSP 1 Score: 136 bits (343), Expect = 1.130e-35
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    1 MRFGTTPTSLWVAKECITKNRVDFANTLAPNVAVGEFIDSFEKAGITPHMAGRIRALTHDEFALNRKEHQAKKPLFIVEEAHMFTGIKYDA 91
            M  G T TSLWVAKE I KNRV F N LAPNVAVGEFIDSFE+AGITP  AG+IR LTHDEFALN+K  +  K L IV+EAHMFTG+KYDA
Sbjct:  171 MGSGKTLTSLWVAKEYIAKNRVKFVNILAPNVAVGEFIDSFERAGITPQTAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGMKYDA 261          
BLAST of mRNA_P-littoralis_Contig97.4.1 vs. uniprot
Match: A0A6H5JDR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR8_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.380e-22
Identity = 48/71 (67.61%), Postives = 56/71 (78.87%), Query Frame = 0
Query:   21 RVDFANTLAPNVAVGEFIDSFEKAGITPHMAGRIRALTHDEFALNRKEHQAKKPLFIVEEAHMFTGIKYDA 91
            +V F N LA NVAVGE I+SFE+AGITP +AG+IR LTHD FALNRK  +  + L IV+EAHMFT IKYDA
Sbjct:  531 KVKFVNILASNVAVGELINSFERAGITPQIAGKIRVLTHDGFALNRKARKFSRSLVIVDEAHMFTAIKYDA 601          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig97.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LP58_ECTSI2.200e-3674.73Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Q8QNN8_ESV1K1.130e-3573.63EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
A0A6H5JDR8_9PHAE1.380e-2267.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig97contigP-littoralis_Contig97:58796..59071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig97.4.1mRNA_P-littoralis_Contig97.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig97 58566..59500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig97.4.1 ID=prot_P-littoralis_Contig97.4.1|Name=mRNA_P-littoralis_Contig97.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=92bp
MRFGTTPTSLWVAKECITKNRVDFANTLAPNVAVGEFIDSFEKAGITPHM
AGRIRALTHDEFALNRKEHQAKKPLFIVEEAHMFTGIKYDA*
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