prot_P-littoralis_Contig969.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig969.17.1
Unique Nameprot_P-littoralis_Contig969.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length80
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig969.17.1 vs. uniprot
Match: A0A6H5KX32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX32_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.970e-26
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 0 
Query:    1 MTVYVQAVKLVVQAEEAVFKKTGKRIMVSSSHIGQENTGTLRHLAWRESRPSAFYSPCANKAGENVATKRRCPACAVQTL 80
            M  YV+AV  V + E AVF  TG RIMV SSH+GQ+NTGTLRH+AWRES P  F+SPCAN+AG N++TKR+CPACA Q L
Sbjct:  431 MVRYVEAVVQVAKEEAAVFVMTGVRIMVVSSHLGQDNTGTLRHMAWRESGPWTFFSPCANEAGVNMSTKRKCPACAEQVL 510
[Close]
BLAST of mRNA_P-littoralis_Contig969.17.1 vs. uniprot
Match: A0A6H5KGM5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM5_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.970e-25
Identity = 44/59 (74.58%), Postives = 52/59 (88.14%), Query Frame = 0 
Query:   22 TGKRIMVSSSHIGQENTGTLRHLAWRESRPSAFYSPCANKAGENVATKRRCPACAVQTL 80
            TG RIMV SSH+GQ+NTGTLRH+AWRES P  F+SPCAN+AG N++TKR+CPACAVQ L
Sbjct:    2 TGVRIMVVSSHLGQDNTGTLRHMAWRESGPWTFFSPCANEAGVNMSTKRKCPACAVQVL 60
[Close]
BLAST of mRNA_P-littoralis_Contig969.17.1 vs. uniprot
Match: A0A6H5JYT6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT6_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.640e-24
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 0 
Query:    1 MTVYVQAVKLVVQAEEAVFKKTGKRIMVSSSHIGQENTGTLRHLAWRESRPSAFYSPCANKAGENVATKRRCPACAVQTL 80
            M  YV+AV  V + E AVF  TG RIMV SS +GQ NTGTLRH+AWRES P  F+SPCAN+AG N++TKR+CPACA Q L
Sbjct:  289 MVRYVEAVVQVAKEETAVFVMTGLRIMVVSSLLGQGNTGTLRHMAWRESGPWTFFSPCANEAGVNMSTKRKCPACAEQVL 368
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig969.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KX32_9PHAE1.970e-2666.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGM5_9PHAE3.970e-2574.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JYT6_9PHAE1.640e-2465.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig969contigP-littoralis_Contig969:27340..27773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig969.17.1mRNA_P-littoralis_Contig969.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig969 27340..27773 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig969.17.1 ID=prot_P-littoralis_Contig969.17.1|Name=mRNA_P-littoralis_Contig969.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=80bp
MTVYVQAVKLVVQAEEAVFKKTGKRIMVSSSHIGQENTGTLRHLAWRESR
PSAFYSPCANKAGENVATKRRCPACAVQTL
back to top