prot_P-littoralis_Contig964.5.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig964.5.3
Unique Nameprot_P-littoralis_Contig964.5.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length555
Homology
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: A0A6H5JXB7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXB7_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.480e-74
Identity = 156/337 (46.29%), Postives = 197/337 (58.46%), Query Frame = 0
Query:  168 TCEALTPTPQVQIIEISNGSLGSEDT-CWDIRNQVDMSIFVTFEVLDLAENDTLSLETGGRTFAIEAQPG------GDQYEFAGVEGAVR---------IVYEVQDLTADRNMTFAYTQSTNQVSTSFLFNSTLIVLGVVWCGVTFARLVCVHHARDA--NGAGLAYDRGAADGATDGAG----GIGAATSSGPVGLTPAQIRSLEQTNHLPLHRRFGSKMAAIAGELDLEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVGT-----GNWQEEEATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSVEPPSSD 477
            TCE L P+ +   + I   S G  D  CWDI N    ++ ++F   D A  D L++E  G T  +E + G      GD  E  G +G  R         + +   + TA+R +  AY ++ +Q+S+SFLFNSTL++LG VWCGVTFARLVCVH AR++  +GA L+ DR    G   GAG    G+GAATS+GP GLTPAQIRSLEQTN LP HRRFGSK+    G++D+E G                                  P  GT     G   EEEA CAICLCEEE+GQ LR+LPCGHFFH+ CVDVWLAQ+P+CPFCKQ VEPPS++
Sbjct:  102 TCETLDPSAEEDTLNIDADSAGEGDEICWDIPNVDGSTLTISFRQADFAAGDELTVEDDGDT-DVEYEEGRGLVLDGDVIE-VGADGEARELFYSSTATVRFSATNTTAERMVVMAYKRTVDQISSSFLFNSTLVLLGFVWCGVTFARLVCVHRARESALSGAHLS-DRRGGRGDQTGAGLTLTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKLVGGGGDMDVEKG-----------------------------WGVSGPGKGTEPAVAGEGVEEEAMCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTE 406          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: D7G6J3_ECTSI (Similar to ring finger protein 167 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J3_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 5.390e-65
Identity = 125/217 (57.60%), Postives = 145/217 (66.82%), Query Frame = 0
Query:  271 STNQVSTSFLFNSTLIVLGVVWCGVTFARLVCVHHARDANGAGLAY-DRGAADGATDGAG----GIGAATSSGPVGLTPAQIRSLEQTNHLPLHRRFGSKMAAIAGELDLEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVGT-----GNWQEEEATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSVEPPSSD 477
            ST+Q+STSFLFNSTLI+LG VWCGVTFARLVCVH AR++  +G  + DR    G   GAG    G+GAATS+GP GLTPAQIRSLEQTN LP HRRFGSK+A   G++D+E G                                  P  GT     G   EEEATCAICLCEEE+GQ LR+LPCGHFFH+ CVDVWLAQ+P+CPFCKQ VEPPS++
Sbjct:   17 STHQISTSFLFNSTLILLGFVWCGVTFARLVCVHRARESALSGAHFSDRRGGRGDQTGAGFTGTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKLAGGGGDMDVEKG-----------------------------WGVGGPGKGTEPAAAGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTE 204          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: R7Q7W7_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7W7_CHOCR)

HSP 1 Score: 81.6 bits (200), Expect = 2.170e-13
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  418 GNWQEEEATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSVE 472
            GN   E+A+C ICLCE EEG+T+R LPC H FH DCVDVWL  + +C  CKQ ++
Sbjct:  233 GNDSLEDASCVICLCEYEEGETVRFLPCKHHFHQDCVDVWLRLDKACCLCKQDID 287          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: A0A6S8S1Z2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S1Z2_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.730e-13
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
Query:  423 EEATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSVEPPSSD 477
            EE  C +C+C+ EE   LR+LPC H FH+DCVD WLA N +CP C++S+  P SD
Sbjct:  251 EEPCCPVCICDYEENDRLRVLPCSHVFHADCVDQWLAVNATCPLCRKSIFVPDSD 305          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: A0A8C3ZMD8_9TELE (RING-type domain-containing protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZMD8_9TELE)

HSP 1 Score: 74.3 bits (181), Expect = 9.590e-13
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  424 EATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSV 471
            +  C ICLCE   G+ LR+LPC H FH++CVD WL QNPSCP C+  V
Sbjct:   44 QCDCRICLCEYTAGEELRVLPCLHDFHAECVDRWLQQNPSCPICRADV 91          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: UPI000644E744 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E744)

HSP 1 Score: 81.3 bits (199), Expect = 1.390e-12
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 0
Query:  417 TGNWQEEEATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSVE 472
            TG  ++++ +CAICLCE +E   +RILPC H FH DCVD WL  N SCPFCK+ ++
Sbjct:  394 TGLLEKDDCSCAICLCEYDEDDKIRILPCRHHFHLDCVDRWLVINKSCPFCKRDID 449          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: A0A2V3IK85_9FLOR (E3 ubiquitin-protein ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK85_9FLOR)

HSP 1 Score: 79.7 bits (195), Expect = 2.490e-12
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 0
Query:  417 TGNWQEEEATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSVEPPSSDEA 479
            TG+   ++A+C ICLC+ E+G+T+R LPC H FH DCVDVWL  + +C  CKQ ++  +S  A
Sbjct:  327 TGSENLDDASCVICLCDYEDGETVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPA 389          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: A0A7S3V245_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V245_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.780e-12
Identity = 28/54 (51.85%), Postives = 43/54 (79.63%), Query Frame = 0
Query:  419 NWQEEEA-TCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSV 471
            N+ + E+ TCAIC+C+ EEG  +R+LPC H+FH++C+DVWL +N +CP CK+ +
Sbjct:  627 NYSDNESDTCAICICDYEEGDQVRLLPCQHYFHAECIDVWLRKNKACPMCKRDI 680          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: A0A5J4YP56_PORPP (E3 ubiquitin protein ligase RIE1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP56_PORPP)

HSP 1 Score: 79.0 bits (193), Expect = 4.370e-12
Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 0
Query:  418 GNWQEEEATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSVEPPSSDEAKRNGS 484
            G + +E+  CAICLCE E  + LR+LPC H FHS CVD WL ++  CP CKQ +    +D A   G+
Sbjct:  239 GMYSDEDCLCAICLCEYEPDEKLRVLPCNHVFHSTCVDTWLGRSRQCPVCKQEIV---TDSANARGT 302          
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Match: A0A1Y2GZ21_9FUNG (RING-type domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GZ21_9FUNG)

HSP 1 Score: 73.9 bits (180), Expect = 4.650e-12
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:  423 EEATCAICLCEEEEGQTLRILPCGHFFHSDCVDVWLAQNPSCPFCKQSVEPPSSDEAKRN 482
            EEATCAICL      +T+R+LPC H FH +CVD WL  + SCP CK  ++ P  +  +RN
Sbjct:   47 EEATCAICLGNYVLDETIRVLPCQHHFHLECVDQWLFTDKSCPLCKHDIDKPILNSFRRN 106          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig964.5.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXB7_9PHAE1.480e-7446.29RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6J3_ECTSI5.390e-6557.60Similar to ring finger protein 167 isoform 1 n=1 T... [more]
R7Q7W7_CHOCR2.170e-1358.18RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A6S8S1Z2_9STRA3.730e-1354.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8C3ZMD8_9TELE9.590e-1358.33RING-type domain-containing protein n=1 Tax=Dentic... [more]
UPI000644E7441.390e-1255.36hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A2V3IK85_9FLOR2.490e-1249.21E3 ubiquitin-protein ligase n=1 Tax=Gracilariopsis... [more]
A0A7S3V245_9STRA3.780e-1251.85Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A5J4YP56_PORPP4.370e-1247.76E3 ubiquitin protein ligase RIE1 n=1 Tax=Porphyrid... [more]
A0A1Y2GZ21_9FUNG4.650e-1250.00RING-type domain-containing protein n=1 Tax=Lobosp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 427..467
e-value: 2.4E-8
score: 43.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 426..468
e-value: 1.7E-12
score: 47.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 427..468
score: 12.651561
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 406..476
e-value: 6.7E-20
score: 72.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 488..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..555
NoneNo IPR availablePANTHERPTHR45798RING-H2 FINGER PROTEIN ATL61-RELATED-RELATEDcoord: 384..482
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 426..468
e-value: 3.4936E-20
score: 81.9645
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 421..474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig964contigP-littoralis_Contig964:4149..16535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig964.5.3mRNA_P-littoralis_Contig964.5.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig964 4009..16535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig964.5.3 ID=prot_P-littoralis_Contig964.5.3|Name=mRNA_P-littoralis_Contig964.5.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=555bp
MGAGTPRVIEQSQLHSSQKIKQAVFPLHFTCQPRTGNKPAVANHAVVVIF
AVGLRKSAAMAADDDSCRGRNNNYTAAAAAAATTAATTTAADFRRIAREE
ADTIGPLWNHFGGSRWAPLAREGEGRRPEEEELNLPLLASAAAGAAGAAE
TAGTSETRNLQLRGESDTCEALTPTPQVQIIEISNGSLGSEDTCWDIRNQ
VDMSIFVTFEVLDLAENDTLSLETGGRTFAIEAQPGGDQYEFAGVEGAVR
IVYEVQDLTADRNMTFAYTQSTNQVSTSFLFNSTLIVLGVVWCGVTFARL
VCVHHARDANGAGLAYDRGAADGATDGAGGIGAATSSGPVGLTPAQIRSL
EQTNHLPLHRRFGSKMAAIAGELDLEGGEGGGGLGKGAGASGAAGAAGAA
GAAEAAAAAAAAPEVGTGNWQEEEATCAICLCEEEEGQTLRILPCGHFFH
SDCVDVWLAQNPSCPFCKQSVEPPSSDEAKRNGSRNDSRNNGADSSSSSS
VGMFRRWLRHHDQGSGGAATAGAAAVGPTAGAPPRPDSVVIVGGGGGGSD
GDRDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD