prot_P-littoralis_Contig96.61.33 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig96.61.33
Unique Name	prot_P-littoralis_Contig96.61.33
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	571

Homology

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BLAST of mRNA_P-littoralis_Contig96.61.33 vs. uniprot
Match: A0A6H5LHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHH7_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 9.360e-102
Identity = 171/239 (71.55%), Postives = 198/239 (82.85%), Query Frame = 0

Query:    1 MRDLGELFEEAPSVESYPEYHLKVKNIMDLNTIREKVVDRKYTGVQGLVSDVALMYSNAQAIKHEQATKDGEQLLRLARATVDLLEREAREGTSRKHKLNQQAAXXXXXXXXXXXXXXXXPAAVFGDGLRISCAKCSRVRRDPP----GRKPSKACTKKERYWFCEPCVTGSPEAFSGRGIGVCRRDGKWKLATVRGYEPLSGKHEVVYRGELAWEFLALGDPVNHIRYCQPVPPASLS 235
            MRDLGELFEEAPS +SYPEYH KVKNIMDLNTIR KV+DR+Y+ V+GL+SDVALMYSNAQ I+HEQATKDG+QLL LA+ATV+ L RE +EGT RK +L QQ +                 AAVFG GLRI+CAKC+++RRDPP    G +PS ACTKKERYWFCE CVT SP+AF+GRGIGVCR+DGKWK+ATVRGYEPLSGKHEV+YRG++ WEFL+LGDP NHIRYCQPVPPASL+
Sbjct: 2168 MRDLGELFEEAPSEDSYPEYHAKVKNIMDLNTIRTKVLDREYSSVEGLLSDVALMYSNAQVIRHEQATKDGKQLLALAQATVERLRRERQEGTPRKDRLRQQQSASGSEQPA---------AAVFGTGLRINCAKCTKLRRDPPLAATGGRPSMACTKKERYWFCESCVTESPDAFTGRGIGVCRQDGKWKMATVRGYEPLSGKHEVLYRGDIPWEFLSLGDPRNHIRYCQPVPPASLN 2397

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BLAST of mRNA_P-littoralis_Contig96.61.33 vs. uniprot
Match: D7FV42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV42_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 3.880e-93
Identity = 159/239 (66.53%), Postives = 188/239 (78.66%), Query Frame = 0

Query:    1 MRDLGELFEEAPSVESYPEYHLKVKNIMDLNTIREKVVDRKYTGVQGLVSDVALMYSNAQAIKHEQATKDGEQLLRLARATVDLLEREAREGTSRKHKLNQQAAXXXXXXXXXXXXXXXXPAAVFGDGLRISCAKCSRVRRDPP----GRKPSKACTKKERYWFCEPCVTGSPEAFSGRGIGVCRRDGKWKLATVRGYEPLSGKHEVVYRGELAWEFLALGDPVNHIRYCQPVPPASLS 235
            MRDLGELFEEAPS +SYPEYH KVKNIMDLNT+R KV+DR+Y+ V+GL+SDVALMYSNAQ I+HEQATKDG+QLL LA+ TV+ L RE +EGT RK +L QQ +                           S ++C+++RRDPP    G +PSKACTKKERYWFCE CVT SP++F+GRGIGVCRRDGKWK+ATVRGYEPLSGKHEV+YRG++ WEFL+LGDP NHIRYCQPVPPASL+
Sbjct: 1714 MRDLGELFEEAPSEDSYPEYHAKVKNIMDLNTVRTKVLDREYSSVEGLLSDVALMYSNAQVIRHEQATKDGKQLLDLAQTTVERLRRERKEGTPRKDRLRQQQS--------------------------ASGSECTKLRRDPPPAATGGRPSKACTKKERYWFCESCVTESPDSFTGRGIGVCRRDGKWKMATVRGYEPLSGKHEVLYRGDIPWEFLSLGDPCNHIRYCQPVPPASLN 1926

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BLAST of mRNA_P-littoralis_Contig96.61.33 vs. uniprot
Match: A0A1S3IY77_LINUN (protein polybromo-1-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IY77_LINUN)

HSP 1 Score: 59.3 bits (142), Expect = 1.930e-5
Identity = 26/66 (39.39%), Postives = 44/66 (66.67%), Query Frame = 0

Query:    2 RDLGELFEEAPSVESYPEYHLKVKNIMDLNTIREKVVDRKYTGVQGLVSDVALMYSNAQAIKHEQA 67
            R L ++F E PS + YP+Y+  +   +D+NTI+ K+++ KYT  Q L++D+ LM+SNA+    E +
Sbjct:  262 RSLIDIFIELPSKKEYPDYYQVISEPIDMNTIKTKIMEEKYTTEQALIADLKLMFSNARHYNEESS 327

[Close]

BLAST of mRNA_P-littoralis_Contig96.61.33 vs. uniprot
Match: A0A1S3KHJ7_LINUN (protein polybromo-1 isoform X1 n=6 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KHJ7_LINUN)

HSP 1 Score: 59.3 bits (142), Expect = 2.070e-5
Identity = 26/66 (39.39%), Postives = 44/66 (66.67%), Query Frame = 0

Query:    2 RDLGELFEEAPSVESYPEYHLKVKNIMDLNTIREKVVDRKYTGVQGLVSDVALMYSNAQAIKHEQA 67
            R L ++F E PS + YP+Y+  +   +D+NTI+ K+++ KYT  Q L++D+ LM+SNA+    E +
Sbjct:  657 RSLIDIFIELPSKKEYPDYYQVISEPIDMNTIKTKIMEEKYTTEQALIADLKLMFSNARHYNEESS 722

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig96.61.33 vs. uniprot

BLAST of mRNA_P-littoralis_Contig96.61.33 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5LHH7_9PHAE	9.360e-102	71.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FV42_ECTSI	3.880e-93	66.53	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A1S3IY77_LINUN	1.930e-5	39.39	protein polybromo-1-like n=1 Tax=Lingula unguis Ta...	[more]
A0A1S3KHJ7_LINUN	2.070e-5	39.39	protein polybromo-1 isoform X1 n=6 Tax=Lingula ung...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 551..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 480..495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..421
None	No IPR available	CDD	cd04369	Bromodomain	coord: 2..79 e-value: 3.48449E-15 score: 69.3234
IPR001487	Bromodomain	SMART	SM00297	bromo_6	coord: 1..87 e-value: 0.0015 score: 18.7
IPR001487	Bromodomain	PFAM	PF00439	Bromodomain	coord: 3..65 e-value: 1.0E-11 score: 44.7
IPR001487	Bromodomain	PROSITE	PS50014	BROMODOMAIN_2	coord: 1..70 score: 12.8576
IPR036427	Bromodomain-like superfamily	GENE3D	1.20.920.10		coord: 1..123 e-value: 1.1E-15 score: 59.5
IPR036427	Bromodomain-like superfamily	SUPERFAMILY	47370	Bromodomain	coord: 5..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig96	contig	P-littoralis_Contig96:273079..277087 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig96.61.33	mRNA_P-littoralis_Contig96.61.33	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig96 266733..277891 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig96.61.33 ID=prot_P-littoralis_Contig96.61.33|Name=mRNA_P-littoralis_Contig96.61.33|organism=Pylaiella littoralis U1_48|type=polypeptide|length=571bp
MRDLGELFEEAPSVESYPEYHLKVKNIMDLNTIREKVVDRKYTGVQGLVS
DVALMYSNAQAIKHEQATKDGEQLLRLARATVDLLEREAREGTSRKHKLN
QQAASTAEEQHQQQQKQQQQPAAVFGDGLRISCAKCSRVRRDPPGRKPSK
ACTKKERYWFCEPCVTGSPEAFSGRGIGVCRRDGKWKLATVRGYEPLSGK
HEVVYRGELAWEFLALGDPVNHIRYCQPVPPASLSPEPQTPIQQQPRQEN
AVNNSGAVNTAGGKGGPSSPSSSSSSPPAKGDKPERGGDSAEQQGETVLG
TGGSKDAPFPRGSSSAAVAVEAMGGANGGRQMSDGCERSDVDGGGGGGGS
GGGGSGGGGSRGGDGGDVDGSDPGRDGGEAYTAAGDEELKTAAKRKREDG
GGDSDVEEAKRMREGDDELVAVGDAPRAPAAAAVHPTAAALPRATTASAA
AATAAAPAASNSSEVDGVDRTEKTSGASAGCARPESTTEGVTQLESDDVP
TAAAAAAAAAGAPGDGGATTECGEIAAASEASHGGGGGETTSAAAGPAAA
ETLPSSSQDSTNAGTTSTAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001487	Bromodomain
IPR036427	Bromodomain-like_sf