prot_P-littoralis_Contig95.88.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig95.88.1
Unique Nameprot_P-littoralis_Contig95.88.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length93
Homology
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BLAST of mRNA_P-littoralis_Contig95.88.1 vs. uniprot
Match: A0A6H5JCX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX9_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 9.190e-24
Identity = 64/95 (67.37%), Postives = 70/95 (73.68%), Query Frame = 0 
Query:    1 MGTIPGV-MAMPPDPSQKIPPEARGRVRRKKKAASAG---GRGSTAAGFPSATTPAGMGLGEAGGGGGEIETNRTFVTSRGFPEVDHPSVIDGQA 91
            MGTIPG+ ++MPPDPSQKIPPEARGRVRRK           RGSTA GFPSAT PAG+  G AG G    + NRTFVTSRGFPEVDH  V+DGQA
Sbjct:  140 MGTIPGLTVSMPPDPSQKIPPEARGRVRRKXXXXXXXXXXARGSTA-GFPSAT-PAGLAQGGAGAGEDGGDANRTFVTSRGFPEVDHLGVVDGQA 232
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BLAST of mRNA_P-littoralis_Contig95.88.1 vs. uniprot
Match: D8LIF7_ECTSI (Transmembrane protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF7_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 2.290e-21
Identity = 62/95 (65.26%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    1 MGTIPGVMA-MPPDPSQKIPPEARGRVRRKKKAASAG---GRGSTAAGFPSATTPAGMGLGEAGGGGGEIETNRTFVTSRGFPEVDHPSVIDGQA 91
            MGTIPG+ A MPPDPSQKIPPEARGRVRR            RGSTA GFPSAT PA +  G  G G    + NRTFVTSRGFPEVDH  V+DGQA
Sbjct:  125 MGTIPGLTASMPPDPSQKIPPEARGRVRRXXXXXXXXXXXARGSTA-GFPSAT-PAELAQGGTGAGEDGGDANRTFVTSRGFPEVDHLGVVDGQA 217
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig95.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCX9_9PHAE9.190e-2467.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIF7_ECTSI2.290e-2165.26Transmembrane protein, putative n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig95contigP-littoralis_Contig95:333799..334077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig95.88.1mRNA_P-littoralis_Contig95.88.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig95 333596..339512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig95.88.1 ID=prot_P-littoralis_Contig95.88.1|Name=mRNA_P-littoralis_Contig95.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=93bp
MGTIPGVMAMPPDPSQKIPPEARGRVRRKKKAASAGGRGSTAAGFPSATT
PAGMGLGEAGGGGGEIETNRTFVTSRGFPEVDHPSVIDGQAV*
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