prot_P-littoralis_Contig932.11.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig932.11.2
Unique Nameprot_P-littoralis_Contig932.11.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length573
Homology
BLAST of mRNA_P-littoralis_Contig932.11.2 vs. uniprot
Match: A0A6H5JE62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE62_9PHAE)

HSP 1 Score: 505 bits (1300), Expect = 2.120e-171
Identity = 335/579 (57.86%), Postives = 376/579 (64.94%), Query Frame = 0
Query:    4 AGVRRAR-HPCRTLIVVCTVLTATAPSSFGFQVAVPSSSRGSSSXXXXXXXXXXXXXXXSSERRASRPR--TLGQTHRAQQR-VSAGIVLYEEGVRHLRRRESALLSQLEDSTDEGGQEQQQVFESPAEAQKPTAXXXXXXXXVTVA---APRRYMGDGAGIGDEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQAQQARDPDSIDDAQRAKLLRKQNLVAEISELELLRRDLRETEWESGGGSSAAPKKEKTSRLPPGPFAGINAAG--ERGAQQQPEGEGEGEDDGAEYTRDGLRLASPKRQLQRPKPAAAAADAAAAGVVGQPTTQPTGGRPAAATAAAPAAEASHAFKDGDLFADGSXXXXXXXXXXXEEVSKMAAMLKASMDGTDGE-DEGDGGFNWEEGYKDMEGQVAEAEAAEAAAPVAQMSPMMEAPAGGYPKRLAGMMSFCRVSDKATCEILVEMGRVTVNGVVARDSAAKVDLLTDIVVANGVAVTFPGKIDNSDETRKPREDEGKRTGPIPKAEKNTWKQKTKYRWGMDEGLLAKRTRRAANAKTSEKKRRGSGGGYDDW 572
            AGV RAR HPC   + +C  L   +PS+ GF  A P   R SSS                 +RRA+ P    LG+ H+A++R +S+   +  EG    RRRE  LL++  D  D  G EQ +    PAE ++           VT A   APRRY+GDGAG+ DEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQAQQAR PDS+DDAQR KL RKQ L+AEISELE LRRDLR+ EWES G +SA PK+ K SRLPPGPFA  NAAG      Q QPE     EDDGAEYTRDGLRLASPKR+L                                            +  D DLF+DG              V  M A++K SMDG D E +EGDGGFNWEEG++D  G     E A          PM+EA AGGYPKRLAG+MSFCRVSDKATCEILVEMGRVTVNGVVARD   KVDLLTDIVVANGVAVTFPGKIDNSDETR+PRED GKRTGPIPKAEKNTWKQKTKYRWGMD+GLLAKRTRRAANAK  +KKR+  GGG+D+W
Sbjct:   11 AGVTRARRHPCVAFVALCACLIWRSPSACGFHFAAP---RTSSS---------------GHQRRATLPPRLALGRPHQARRRRLSSACAISREG--GARRREWLLLAEHVDG-DGHGPEQPEPH--PAEVRRAAGT-------VTSAPPLAPRRYVGDGAGMADEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQAQQARAPDSLDDAQRVKLGRKQTLLAEISELEALRRDLRQKEWESDG-ASAGPKENKKSRLPPGPFAAANAAGGGHDTRQHQPE-----EDDGAEYTRDGLRLASPKRRLXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGDADLFSDGGGGG----------VLAMEALIKPSMDGQDWEKEEGDGGFNWEEGFEDAGGSSEGREEAR---------PMVEALAGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGVVARDPGIKVDLLTDIVVANGVAVTFPGKIDNSDETRRPREDAGKRTGPIPKAEKNTWKQKTKYRWGMDDGLLAKRTRRAANAKAFDKKRQTGGGGFDNW 522          
BLAST of mRNA_P-littoralis_Contig932.11.2 vs. uniprot
Match: D7FYC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC7_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 1.580e-128
Identity = 238/359 (66.30%), Postives = 257/359 (71.59%), Query Frame = 0
Query:  160 DEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQAQQARDPDSIDDAQRAKLLRKQNLVAEISELELLRRDLRETEWESGGGSSAAPKKEKTSRLPPGPFAGINAAGERGAQQQPEGEGEGEDDGAEYTRDGLRLASPKRQLQRPKPAAAAADAAAAGVVGQPTTQPTGGRPAAATAAAPAAEASHAFKDGDLFADGSXXXXXXXXXXXEEVSKMAAMLKASMDGTDGE-DEGDGGFNWEEGYKDMEGQVAEAEAAEAAAPVAQMSPMMEAPAGGYPKRLAGMMSFCRVSDKATCEILVEMGRVTVNGVVARDSAAKVDLLTDIVVANGVAVTFPGKIDNSDETRKPREDEGK 517
            DEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQAQQARDPDS+DDAQR KL RKQ L+ EISELE LRRDLR+ EWES G +SA PK EK SRLPPGPFA  NAAG     +Q + E   EDDGAEYTRDGLRLASPKRQ+Q                           RP+A T  A AA  S +  D DLF+DG              VS M A++K+SMDG D E +EGDGGFNWEEG++D  G     E A          PM+EAPAGGYPKRLAG+MSFCRVSDKATCEILVEMGRVTVNGVVARD   KVDLLTDIVVANGVAVTFPG IDNSDETR+PRED GK
Sbjct:    3 DEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQAQQARDPDSLDDAQRVKLGRKQTLLTEISELEALRRDLRQKEWESDG-ASAGPK-EKKSRLPPGPFAAANAAGGGHDTRQHQLE---EDDGAEYTRDGLRLASPKRQVQXXXXX----------XXXXXXXXXXXSRPSAGTPGAAAAVPSPSLGDADLFSDGDGGG----------VSAMEALIKSSMDGQDWEKEEGDGGFNWEEGFEDAGGSSEGREEAR---------PMVEAPAGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGVVARDPGIKVDLLTDIVVANGVAVTFPGTIDNSDETRRPREDAGK 327          
BLAST of mRNA_P-littoralis_Contig932.11.2 vs. uniprot
Match: A0A835YSP6_9STRA (S4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSP6_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.770e-23
Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 0
Query:  439 GYPKRLAGMMSFCRVSDKATCEILVEMGRVTVNGVVARDSAAKVDLLTDIVVANGVAVTFPGKIDNSDETRKPREDEG--------KRTGPIPKAEK-NTWKQKTKYRWGMDEGLLAKRTR 550
            G PK+L  ++S+CRVS + TCE+LV +GRVTVNG V  ++  KVD+L D ++ANG  V  P K DN+     P  DEG        KRTGP+PK+EK  TWKQ TKY W +D GL+A++ R
Sbjct:  166 GLPKKLGTVLSYCRVSTRETCEMLVAIGRVTVNGEVVTNADKKVDILNDEIIANGARVEIPDKFDNTFSA--PPVDEGEARPRGGKKRTGPLPKSEKPKTWKQLTKYTWKVDGGLMARKVR 284          
BLAST of mRNA_P-littoralis_Contig932.11.2 vs. uniprot
Match: A0A4D9D3K9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3K9_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.530e-8
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
Query:  438 GGYPKRLAGMMSFCRVSDKATCEILVEMGRVTVNGVVARDSAAKVDLLTDIVVANGVAVTFP 499
            G  P+ +  ++ +CR+SDKATCEIL+E+G+V VNGVV  D  A VDL+ D +  +G  VT P
Sbjct:  175 GRIPRTILKLLVYCRLSDKATCEILLELGKVKVNGVVCDDPVALVDLVKDKIEFDGEPVTLP 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig932.11.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JE62_9PHAE2.120e-17157.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYC7_ECTSI1.580e-12866.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSP6_9STRA2.770e-2350.41S4 domain-containing protein n=1 Tax=Tribonema min... [more]
A0A4D9D3K9_9STRA6.530e-850.00Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 220..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..71
NoneNo IPR availablePROSITEPS50889S4coord: 459..517
score: 9.101016

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig932contigP-littoralis_Contig932:54091..60274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig932.11.2mRNA_P-littoralis_Contig932.11.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig932 53712..60301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig932.11.2 ID=prot_P-littoralis_Contig932.11.2|Name=mRNA_P-littoralis_Contig932.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=573bp
MTAAGVRRARHPCRTLIVVCTVLTATAPSSFGFQVAVPSSSRGSSSSSER
SSSSSRSRDHSSSERRASRPRTLGQTHRAQQRVSAGIVLYEEGVRHLRRR
ESALLSQLEDSTDEGGQEQQQVFESPAEAQKPTAATAAAAPPVTVAAPRR
YMGDGAGIGDEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQA
QQARDPDSIDDAQRAKLLRKQNLVAEISELELLRRDLRETEWESGGGSSA
APKKEKTSRLPPGPFAGINAAGERGAQQQPEGEGEGEDDGAEYTRDGLRL
ASPKRQLQRPKPAAAAADAAAAGVVGQPTTQPTGGRPAAATAAAPAAEAS
HAFKDGDLFADGSGAGADIDVDVDEEVSKMAAMLKASMDGTDGEDEGDGG
FNWEEGYKDMEGQVAEAEAAEAAAPVAQMSPMMEAPAGGYPKRLAGMMSF
CRVSDKATCEILVEMGRVTVNGVVARDSAAKVDLLTDIVVANGVAVTFPG
KIDNSDETRKPREDEGKRTGPIPKAEKNTWKQKTKYRWGMDEGLLAKRTR
RAANAKTSEKKRRGSGGGYDDW*
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