prot_P-littoralis_Contig931.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig931.5.1
Unique Nameprot_P-littoralis_Contig931.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length517
Homology
BLAST of mRNA_P-littoralis_Contig931.5.1 vs. uniprot
Match: D7FZQ8_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ8_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 4.100e-28
Identity = 139/436 (31.88%), Postives = 203/436 (46.56%), Query Frame = 0
Query:  117 EVMASAEAMAHSTRGDQSGAYRDRQAKVLLAEHIVGLAQHHGSLLLSDGCVLLDGALERQRDD-----------EMDQDAQLARQLAASQLVASPP------VDLTGA----GGTVAGGDGGAAGSSPSGEQESKDDQDALGFI----SRTHAPEFQQLVVEVAKIWRNSHGKFDWNDLHDALHAAAMHAVDMGLTRDQRIVEKFMFRGICVLRKFSSPKLTLAVFTDKLPNKRGVDKAQLDQDSKDARAFQKAYGVAGGASAAGGGASHSS-------RSRGGLAPPAPMHFGGGALPQHGGPRLSAYLPPARGGGSRSAGFGVGQPVMLPLAL--GAPGGQRGGKGHEAGRAVPGGGSSS--SQPLSGRARSAVADFNGIMQDAQQQFVPVPNGPTCDKCANTKKNPHHEFCSCAFSLCSRWKRGGHRAKKCPF 516
            +V+  AE    ST G  S  +R   A   + EH+V L  HH  LL+S   VLL GA E Q +                         AS  V  PP      VDLTG     G TV+   G  A ++ +   +++DD + +  +    + T+A E    ++ + +I RNS   F  +DL   L AA   A ++GL   QR++++ +FRG  +L     P+  L+VF+ KL N +GV    L  D ++ +  +K  G  G AS      +H +       R+RGG+  P+P      A    G PR ++    +           +  PV+LPL    GA G +RGG     G   PG GS S  S   S R  +A+ADFN  +Q  Q++   +P GP C+ CAN  +N  H   +CA+S+C+R  RGGHRA  C +
Sbjct:    2 DVLRDAEKTEKST-GVGSPTFRRLSAVKQVVEHVVDLVHHHDVLLVSGEHVLLHGAKEVQPEPLSAAGGASXXXXXXXXXXXXXXXGASASV--PPMAGLQHVDLTGGMGARGSTVSXXSGSGADTAAA---KARDDAELIKLLDSPPTATNA-EIAPHLLRIKQIMRNSDKFFSRDDLDAVLLAAIRLAAEIGLVDTQRVLQRTLFRGRKLLDASFDPQSVLSVFSRKLSNAQGVTAETLLGDLQEMKLVRKMNGRHGQAS------THQTTTKPSYARARGGIPFPSPYAAAAPAGSVAGPPRAASMAVSS-----------LPAPVVLPLPKKKGASGRKRGG-----GLRGPGAGSLSGPSPQRSPRELAALADFNAQIQAVQEKLPEIPGGPQCNNCANKARNRFHHHFTCAYSICTRCGRGGHRAAACTY 408          
BLAST of mRNA_P-littoralis_Contig931.5.1 vs. uniprot
Match: A0A6H5JHI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI4_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.470e-18
Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 0
Query:   39 GPPPKPMREGSTWVDTSTLRNELPCYVVGAAGAEPLLDLTRVFLTGS-SCAEGSRMALGLRLAPLAAALKPADGSDDFAEVMASAEAMAHSTRGDQSGAYRDRQAKVLLAEHIVGLAQHHGSLLLSDGCVLLD 170
            G PP+P R+ + +VD +T    LPCY     GA  +LDL RVF      C +GS   L  RL  +A  L P  G++ +  V+A A  +A S  GD+S AYR  +AK LLAE+IV LA  HG LL S+GCVLL+
Sbjct:  254 GLPPRPDRQTAAFVDATTAAYALPCYTALVPGAGAMLDLGRVFDRNRLGCDQGSVEELAHRLGEVATRLPPLPGAEVYTAVLARARMVATSRAGDKSVAYRQAEAKKLLAEYIVELALRHGRLLQSEGCVLLE 386          
BLAST of mRNA_P-littoralis_Contig931.5.1 vs. uniprot
Match: A0A6H5LH38_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LH38_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.710e-5
Identity = 43/133 (32.33%), Postives = 60/133 (45.11%), Query Frame = 0
Query:   42 PKPMREGSTWVDTSTLRNELPCYVVGAAGAEPLLDLTRVFLTGSSCAEGSRMALGLRLAPLAAALKPADGSDDFAEVMASAEAMAHSTRGDQSGAYRDRQAKVLLAEHIVGLAQHHGSLLLSDGCVLLDGALE 174
            P+  R  + +VD  T    LPC+  GA GA   LDL RV                           P  G+D +  V+ + E  A + R   S A+R+ +AK +LA HI+ L   H  LL S+ C+L+ GA E
Sbjct:   58 PQLNRSSAVFVDPGTPIEALPCFGPGALGAGQALDLGRVH--------------------------PRPGADSWPTVLEALEKKATAPRAGASRAFRELEAKRILALHILDLFSFHNILLRSEHCLLVHGASE 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig931.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZQ8_ECTSI4.100e-2831.88CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JHI4_9PHAE2.470e-1845.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LH38_9PHAE3.710e-532.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 420..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig931contigP-littoralis_Contig931:60144..67502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig931.5.1mRNA_P-littoralis_Contig931.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig931 59332..67683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig931.5.1 ID=prot_P-littoralis_Contig931.5.1|Name=mRNA_P-littoralis_Contig931.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=517bp
MPTTRSTSVPSPAATPARRGGAAAAAPAPAPASRATARGPPPKPMREGST
WVDTSTLRNELPCYVVGAAGAEPLLDLTRVFLTGSSCAEGSRMALGLRLA
PLAAALKPADGSDDFAEVMASAEAMAHSTRGDQSGAYRDRQAKVLLAEHI
VGLAQHHGSLLLSDGCVLLDGALERQRDDEMDQDAQLARQLAASQLVASP
PVDLTGAGGTVAGGDGGAAGSSPSGEQESKDDQDALGFISRTHAPEFQQL
VVEVAKIWRNSHGKFDWNDLHDALHAAAMHAVDMGLTRDQRIVEKFMFRG
ICVLRKFSSPKLTLAVFTDKLPNKRGVDKAQLDQDSKDARAFQKAYGVAG
GASAAGGGASHSSRSRGGLAPPAPMHFGGGALPQHGGPRLSAYLPPARGG
GSRSAGFGVGQPVMLPLALGAPGGQRGGKGHEAGRAVPGGGSSSSQPLSG
RARSAVADFNGIMQDAQQQFVPVPNGPTCDKCANTKKNPHHEFCSCAFSL
CSRWKRGGHRAKKCPF*
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