prot_P-littoralis_Contig92.44.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: D7G5S1_ECTSI (Putaive LSm10 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S1_ECTSI) HSP 1 Score: 196 bits (497), Expect = 9.750e-62 Identity = 109/151 (72.19%), Postives = 123/151 (81.46%), Query Frame = 0
Query: 7 GRAQNRPRISKKRTNPLERTLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAA--LQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQHMKTMDEQGYRRQMLKAKRSQASP 155
GRA NRP+ +K+T+PLE+TLAIL+QSMRGNK+VVEMKND EISGILEETDRNM A +AA L C RAGP LSMVDVRQTNP+G+VRKMD VLVQGKMIRYVHIPD+VDAISNLQ+HM+TMD+QGY R MLK K SQA P
Sbjct: 3 GRAGNRPQPRQKKTSPLEKTLAILIQSMRGNKIVVEMKNDAEISGILEETDRNMKAATVWLAAYGLTC----SRAGPAPS--LSMVDVRQTNPDGSVRKMDVVLVQGKMIRYVHIPDKVDAISNLQKHMRTMDQQGYHRNMLKPKLSQAPP 147
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: A0A6H5JYY5_9PHAE (Sm domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY5_9PHAE) HSP 1 Score: 138 bits (347), Expect = 1.010e-39 Identity = 76/113 (67.26%), Postives = 82/113 (72.57%), Query Frame = 0
Query: 43 MKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQHMKTMDEQGYRRQMLKAKRSQASP 155
MKND EISGILEETDRNMN LSMVDVRQTNP+G+VRKMD VLVQGKMIRYVHIPD+VDAISNLQ+HM+TMD+QGYRR MLK K SQA P
Sbjct: 1 MKNDAEISGILEETDRNMN-------------------------LSMVDVRQTNPDGSVRKMDVVLVQGKMIRYVHIPDKVDAISNLQKHMRTMDQQGYRRNMLKPKTSQAPP 88
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: A0A8K1CIL4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIL4_PYTOL) HSP 1 Score: 63.9 bits (154), Expect = 3.780e-10 Identity = 44/146 (30.14%), Postives = 72/146 (49.32%), Query Frame = 0
Query: 5 ATGRAQNRPRISKKRTNPLERTLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQH--MKTMDEQGYRRQMLKA 148
AT A + KKR P R+L +L++S+ G +V +++KND + GI+EE +M+ +++D +T PNG +++ V V GK + YVHIPD ++ +LQQ+ M + Y+R KA
Sbjct: 2 ATTTAVGAAPLQKKRRRP--RSLLLLLKSLAGLRVRIDLKNDCVVEGIVEEVLHDMD-------------------------FTLLDACETKPNGRTVRLEEVFVMGKTVLYVHIPDRINISQHLQQYNRMIRQSQDMYKRDKRKA 120
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: A0A5D6XV54_9STRA (Sm domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV54_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 8.130e-10 Identity = 40/130 (30.77%), Postives = 66/130 (50.77%), Query Frame = 0
Query: 25 RTLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQHMKTMDEQGYRRQMLKAKRSQAS 154
R+L +L++S+ G +V V++KND + G++ E +M+ +MVD +T PNG + +MD V V G+ I YVHIPD ++ +LQQ+ + + + + KRS AS
Sbjct: 42 RSLLLLLKSLVGLRVRVDLKNDATVEGVVAEVVHDMD-------------------------FTMVDACETKPNGAMVRMDEVFVMGRTILYVHIPDRINLTQHLQQYTRMVRQSAT--MYTRTKRSAAS 144
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: T1IY48_STRMM (Sm domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IY48_STRMM) HSP 1 Score: 59.7 bits (143), Expect = 1.780e-8 Identity = 32/99 (32.32%), Postives = 49/99 (49.49%), Query Frame = 0
Query: 26 TLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVD 124
TL LV+S+ +E+KN++ ++G +E D MN + M DV PNG+++K T +QG+ +RYVHIPD+VD
Sbjct: 12 TLVCLVKSLEKKATTIELKNESSVTGNIESVDAYMN-------------------------VQMNDVVFLAPNGSLKKFQTFFIQGRQVRYVHIPDDVD 85
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: A0A1V9ZKH8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKH8_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 3.060e-8 Identity = 39/125 (31.20%), Postives = 63/125 (50.40%), Query Frame = 0
Query: 25 RTLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQ--HMKTMDEQGYRRQMLK 147
RTL I++QSM G +V +E+K + + G +EE M+ + + VRQ P+G V + D + V GKMI YVHIPD V+ ++++ HM +++ Y+R + K
Sbjct: 8 RTLLIVLQSMLGMEVTIELKTEHVLVGTVEEVTEGMD-------------------------VRLSHVRQVGPSGRVLEFDELYVMGKMILYVHIPDRVNINAHMKDYVHMVERNKKMYKRAVRK 107
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: K3WE98_GLOUD (Sm domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WE98_GLOUD) HSP 1 Score: 59.3 bits (142), Expect = 3.110e-8 Identity = 32/108 (29.63%), Postives = 58/108 (53.70%), Query Frame = 0
Query: 25 RTLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQH 132
RTL +L++S+ G ++ +++KND+ I GI++E +M+ +M++ +T +G + +MD V V GK + YVHIPD ++ +LQQ+
Sbjct: 44 RTLLLLLKSLVGLRIRIDLKNDSTIEGIVQEVVHDMD-------------------------FTMINACETKTSGKMVRMDEVFVMGKTVLYVHIPDRINLTQHLQQY 126
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: UPI0003F08E1D (uncharacterized protein LOC100367675 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08E1D) HSP 1 Score: 61.2 bits (147), Expect = 3.590e-8 Identity = 34/123 (27.64%), Postives = 62/123 (50.41%), Query Frame = 0
Query: 24 ERTLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQHMKTMDEQGYRRQML 146
E TL L+Q++ G V+E++N++ ++G+++ D MN + M DV N +G V + VQGKMIR+V IPDEV+ ++ ++ + + E+ R++ +
Sbjct: 29 ENTLICLLQALTGKSTVIELRNESTVTGVIDSVDAYMN-------------------------VFMSDVEFVNADGQVMILSNFFVQGKMIRFVQIPDEVNIVTAIKSQLSSWQERRTRKERV 126
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: A0A6A4VJ36_AMPAM (U7 snRNA-associated Sm-like protein LSm10 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VJ36_AMPAM) HSP 1 Score: 59.3 bits (142), Expect = 5.200e-8 Identity = 31/108 (28.70%), Postives = 56/108 (51.85%), Query Frame = 0
Query: 26 TLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQHM 133
TL L+Q+++G+ +E++N++E+ G+++ D MN +++ R T+ GT + D+ V G+ IRYVHIPDEV +S ++Q +
Sbjct: 19 TLVCLLQALKGHSTTIELRNESEVCGVIDYVDGFMN-------------------------VTVRPARFTDAAGTCARFDSFFVHGRQIRYVHIPDEVSPLSAIRQQL 101
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Match: UPI0006B08FA3 (U7 snRNA-associated Sm-like protein LSm10 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B08FA3) HSP 1 Score: 58.2 bits (139), Expect = 6.860e-8 Identity = 34/129 (26.36%), Postives = 65/129 (50.39%), Query Frame = 0
Query: 25 RTLAILVQSMRGNKVVVEMKNDTEISGILEETDRNMNGAVCAIAALQCLTRRRRAGPRHIWVLSMVDVRQTNPNGTVRKMDTVLVQGKMIRYVHIPDEVDAISNLQQHMKTMDEQGYRRQMLKAKRSQA 153
+TL L+Q+++ + VE++N+ I G +E D MN L+M DV T PN +K ++ VQGK +R+VHIPD+++ + +++ + + +G ++ + K++ A
Sbjct: 12 KTLVCLLQALQERETTVELRNEVSILGRIEIVDGYMN-------------------------LTMTDVTLTTPNNEQQKYESFFVQGKQVRFVHIPDDINIVEAIKKQLNLIRGRGQYKERKQHKKALA 115 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig92.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig92.44.1 ID=prot_P-littoralis_Contig92.44.1|Name=mRNA_P-littoralis_Contig92.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bpback to top |