prot_P-littoralis_Contig90.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig90.17.1
Unique Nameprot_P-littoralis_Contig90.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length108
Homology
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BLAST of mRNA_P-littoralis_Contig90.17.1 vs. uniprot
Match: D8LIN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIN1_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 5.790e-56
Identity = 90/107 (84.11%), Postives = 100/107 (93.46%), Query Frame = 0 
Query:    1 MPDSKVIDRKATLLQRPKDADHAGEVLFEECMKLAQDLKDVSLLPVSCRQYLDKKAVLNRACEGMTGDQVAQVSVARNSKIGRNMTHAQLQRRWTARENPLRKNSRK 107
            M DSKVIDRK T+LQRPKDAD A +V FEEC+KLA++LK+VS LPVSCRQYLDKKAVL++ACEGMTGDQ+A+VSVARNSKIGRNMTHAQLQRR TARENPLRKNSRK
Sbjct:    1 MADSKVIDRKVTILQRPKDADSASDVSFEECVKLAKELKEVSRLPVSCRQYLDKKAVLHQACEGMTGDQLAEVSVARNSKIGRNMTHAQLQRRLTARENPLRKNSRK 107
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIN1_ECTSI5.790e-5684.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:107519..116298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.17.1mRNA_P-littoralis_Contig90.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig90 107478..117336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig90.17.1 ID=prot_P-littoralis_Contig90.17.1|Name=mRNA_P-littoralis_Contig90.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=108bp
MPDSKVIDRKATLLQRPKDADHAGEVLFEECMKLAQDLKDVSLLPVSCRQ
YLDKKAVLNRACEGMTGDQVAQVSVARNSKIGRNMTHAQLQRRWTARENP
LRKNSRK*
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