prot_P-littoralis_Contig90.127.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig90.127.1
Unique Name	prot_P-littoralis_Contig90.127.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	258

Homology

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BLAST of mRNA_P-littoralis_Contig90.127.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 5.160e-54
Identity = 131/247 (53.04%), Postives = 155/247 (62.75%), Query Frame = 0

Query:    1 LVVLADGTGTLPPASKKCLRFCVLFNGYQGVFQRDVTVENMSSGCRDRAGATEAEKLSHPVRLFVDDGAVLVSAGPRPETSSAAD---SAPSLSKPYLSPGSGV---DTTDTQAAVVVASGLKSPAQNGEA--QLLDETGRALPSLETLSMPFVVAVAPYRVYDASASVSTSAASAAEALVSDG-SFSLSPGFYGDEYRRHRDSLRP--EASRFCILPVVVRRDDAGG--TTTGCYDDLGEMHEIEE 234
            LVVLA GTGTLPPA+KK +RF VL NG+QGVFQRD+TVEN+SSG  D A   + +++SHPVRLFVDDG V+VS    P   +  +     PS++K  LS G         + QAAVV   G    + + EA   L DE+GRALPSLETL +P+ VAVAP R            A AA A+V+ G SFS SPG+ GDEY R R  L P  E SRF ILP+VV R DAGG        DDLGEMHEIEE
Sbjct: 2970 LVVLAAGTGTLPPATKKGVRFGVLLNGFQGVFQRDITVENISSGSLDGANRAKTDRVSHPVRLFVDDGGVVVSTNSPPSLEAPEEVIAPPPSVAKRRLSQGPSTIFEPLAEMQAAVVANCGGHGSSSSPEAAGHLTDESGRALPSLETLLLPYAVAVAPCR------------AEAATAVVAYGESFSSSPGYSGDEYGRQRGPLLPPEEVSRFRILPLVVPRKDAGGGXXXXXXLDDLGEMHEIEE 3204

[Close]

BLAST of mRNA_P-littoralis_Contig90.127.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.970e-46
Identity = 121/244 (49.59%), Postives = 143/244 (58.61%), Query Frame = 0

Query:    1 LVVLADGTGTLPPASKKCLRFCVLFNGYQGVFQRDVTVENMSSGCRDRAGATEAEKLSHPVRLFVDDGAVLV----SAGPRPETSSAADSAPSLSKPYLSPGSGVDTTDTQAAVVVASGLKSPAQNGEAQLLDETGRALPSLETLSMPFVVAVAPYRVYDASASVSTSAASAAEALVSDG-SFSLSPGFYGDEYRRHRDSLRP--EASRFCILPVVVRRDDAGG---TTTGCYDDLGEMHEIEE 234
            LVVLA GTG L PA+KK +RF VL NG+QGVFQRD+TVEN+SS   D A     + ++HPVRLFVDDG VLV    S   +    + A   P+L+K  LS G    +T  +          S +Q     L DE GRALP L+TL +P+ VAVAP R            A AA A+ + G SFS SPG+ GDEY R R  L P  EASRF ILP+VV R DAGG         DDLGEMHEIEE
Sbjct: 1236 LVVLAAGTGMLQPATKKSVRFGVLLNGFQGVFQRDITVENISSRNLDGANPANTDTVTHPVRLFVDDGGVLVNTNSSTSLKAPEEAVAPPPPALAKHRLSQG---PSTIFEPLANCGGHGSSSSQEAAGHLTDEGGRALPFLDTLLLPYAVAVAPCR------------AEAATAVPAYGESFSSSPGYSGDEYGRQRGPLLPPEEASRFRILPLVVPRKDAGGGXXXXXXXLDDLGEMHEIEE 1464

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig90.127.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig90.127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LHH6_ECTSI	5.160e-54	53.04	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KWQ8_9PHAE	2.970e-46	49.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..258

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig90	contig	P-littoralis_Contig90:477028..477801 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig90.127.1	mRNA_P-littoralis_Contig90.127.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig90 477027..477801 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig90.127.1 ID=prot_P-littoralis_Contig90.127.1|Name=mRNA_P-littoralis_Contig90.127.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=258bp
LVVLADGTGTLPPASKKCLRFCVLFNGYQGVFQRDVTVENMSSGCRDRAG
ATEAEKLSHPVRLFVDDGAVLVSAGPRPETSSAADSAPSLSKPYLSPGSG
VDTTDTQAAVVVASGLKSPAQNGEAQLLDETGRALPSLETLSMPFVVAVA
PYRVYDASASVSTSAASAAEALVSDGSFSLSPGFYGDEYRRHRDSLRPEA
SRFCILPVVVRRDDAGGTTTGCYDDLGEMHEIEEQQDDDAESLDEDEDNG
DHGEESKD