prot_P-littoralis_Contig88.75.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig88.75.1
Unique Nameprot_P-littoralis_Contig88.75.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length630
Homology
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 3.950e-33
Identity = 179/404 (44.31%), Postives = 204/404 (50.50%), Query Frame = 0
Query:  236 GEEAETT-WACNACTFLNDLGISRCEMCGTRMSPQQRPPDNTYRNTLIDAVDTHPASVRSRRWRLADTVGGFEAAAEEERCRLVAEDATARGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIDTGGAISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPETPGAGXXXXXXXXXXXXXXXXXXXXXXXQLVV-------ELMAGPTRGARAGGNAAGVDSDTESFMLAQRLEELNLPEEAAXXXXXXXXXXXXXXXXSALRRELMLETVEGPRGI---VHRRRSRMQRLXXXXXXXXXXXSSTRPASAPVIASLPQETVTADSLSHLNGKNGGNQQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCKKRV 628
            GE  +TT WAC ACT+LND G+SRC+MCGTRMSPQQRPPD TYR+TLI                                              XXXXXXXXXXXXXXXXXXXXXXXXXX  G +D    ISG                                                 + PGAGXXXXXXXXXXXXXXXXXXXXXXX           E + GPT   R G +   V S+ ES MLA+RLE L+LP  AA                 A+RRE           I   + R+ +  Q          XXX  T PASA  IA+LP E +TA +L+HL  K+ G +QCCICL+DF  GE   RL CLHLYHTVCI++WLQTSGTCPQCK RV
Sbjct:  108 GESGDTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGGGVXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGGLSDEPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSSFEFVRGPTARVRRGRD---VVSEMESLMLARRLEALSLPASAA-----------------AMRREGGXXXXXXXSSIYAGILRQLAEAQN-HDAAGGDAXXXXGTSPASARAIAALPGEALTAGALAHL--KDDG-RQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFRV 472          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.420e-27
Identity = 194/397 (48.87%), Postives = 215/397 (54.16%), Query Frame = 0
Query:  238 EAETTWACNACTFLNDLGISRCEMCGTRMSPQQRPPDNTYRNTLIDAVDTHPASVRSRRWRLADTVGGFEAAAEEERCRLVAEDATARGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIDTGGAISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPETPGAGXXXXXXXXXXXXXXXXXXXXXXXQL------VVELMAGPTRGARAGGNAAGVDSDTESFMLAQRLEELNLPEEAAXXXXXXXXXXXXXXXXSALRRELMLETVEGPRGIVHRRRSRMQRLXXXXXXXXXXXSSTRPASAPVIASLPQETVTADSLSHLNGKNGGNQQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCKKRV 628
            E  TTWAC ACT+LND G+SRC+MCGTRMSPQQRPPD TYR+TLI                                              XXXXXXXXXXXXXXXXXXXXXXXX    G +D    ISG       XXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXX         PGAG   XXXXXXXXXXXXXXXXXX  +        VE + GPT   R G +A    S+ ES MLA RL+                           LRR       +   G                     XX    PASA  IA+LP ET+TA SL+HL  K+ G +QCCICL++F  GE   RL CLHLYH+VCI++WLQTSGTCPQCK RV
Sbjct:  274 ETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQGLLDGRSTISGAAAGSAIXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXXAALGGLSNEPGAGGDSXXXXXXXXXXXXXXXXXXFRRQWRRQVSSVEFVRGPTARVRRGRDAV---SEVESLMLA-RLDA------------------------RILRRLAEAHNHDAAGGXXX------------------XXXXASPASARAIAALPGETLTAGSLAHL--KDDG-RQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFRV 605          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: A0A7S0MHN6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MHN6_9CRYP)

HSP 1 Score: 78.6 bits (192), Expect = 6.560e-14
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 0
Query:  553 ASAPVIASLPQETVTADSLSHLNGKNGGNQQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQC 624
            A+A  I +LP ET++ + +  L G      QC +C+DDFA G+ VKRL CLH +H  C+D WLQ SG CP C
Sbjct:   45 AAATDIQNLPTETLSEEGVRRLRGAE--QAQCVVCMDDFAPGDEVKRLPCLHAFHGGCVDRWLQRSGLCPVC 114          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: L1J3G9_GUITC (RING-type domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J3G9_GUITC)

HSP 1 Score: 67.0 bits (162), Expect = 2.450e-10
Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 0
Query:  576 GKNGGNQ--QCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCKKRV 628
            GK  G +  +CCICL ++ VGE +++L CLH +H+VC+D WL ++  CP CK+ +
Sbjct:   19 GKGSGEEATECCICLCEYDVGEKLRKLPCLHRFHSVCVDRWLLSNKMCPICKESI 73          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: A0A835Z4Y2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Y2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.620e-10
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  582 QQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCKKRVG 629
            + CCICL++F  G+GVK L+CLH +HT CID  LQ    CP CK RVG
Sbjct:  103 RSCCICLEEFRAGQGVKWLECLHCFHTTCIDAALQRRDECPICKHRVG 150          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: A0A812WA01_SYMPI (FAM151B protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WA01_SYMPI)

HSP 1 Score: 73.6 bits (179), Expect = 7.080e-10
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0
Query:  558 IASLPQETVTADSLSHLNGKNGGNQQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCKKRVG 629
            +A+LP  T T  +L+HL    G   +C ICL++FA G+ VK L CLH YH  C+D WL T  +CP CK  +G
Sbjct:  671 VAALP--TRTLQNLNHL----GDQTKCLICLEEFADGDEVKTLPCLHFYHQRCVDQWLATDNSCPVCKHPIG 736          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: B7PZI8_IXOSC (RING finger motif containing protein n=15 Tax=Ixodoidea TaxID=297308 RepID=B7PZI8_IXOSC)

HSP 1 Score: 67.8 bits (164), Expect = 8.590e-10
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  581 NQQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCKKRV 628
            N++C IC+ +FA+G+ V+ L C+H+YHT CID WL  S TCP C + V
Sbjct:   87 NRECVICMGEFAMGDAVRFLPCMHIYHTDCIDDWLMRSFTCPSCMEPV 134          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: A0A443SP47_9ACAR (RING finger protein 11-like protein n=2 Tax=Parasitengona TaxID=83141 RepID=A0A443SP47_9ACAR)

HSP 1 Score: 67.8 bits (164), Expect = 1.010e-9
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  581 NQQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCKKRV 628
            N++C IC+ DF +G+ ++ L C+H+YHT CID WL  S TCP C + V
Sbjct:   94 NKECAICMGDFMIGDPIRFLPCMHIYHTECIDDWLMRSFTCPSCMEPV 141          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: A0A7S1F924_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F924_NOCSC)

HSP 1 Score: 71.6 bits (174), Expect = 1.140e-9
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0
Query:  552 PASAPVIASLPQETVTADSLSHLNGKNGGNQQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCKKRVG 629
            PA    IA+LP + ++  SL HL    G   +C ICL++FA G+ +K L CLH+YH  CI+ WL    +CP CK  +G
Sbjct:  294 PAQGSDIAALPTQKLS--SLDHL----GEQTKCLICLENFADGDDLKTLPCLHIYHQRCIERWLTNDNSCPVCKTAIG 365          
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Match: A0A8C4WXD9_EPTBU (RING-type domain-containing protein n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WXD9_EPTBU)

HSP 1 Score: 72.0 bits (175), Expect = 1.390e-9
Identity = 36/77 (46.75%), Postives = 43/77 (55.84%), Query Frame = 0
Query:  549 STRPASAPVIASLPQETVTADSLSHLNGKNGGNQQCCICLDDFAVGEGVKRLQCLHLYHTVCIDHWLQTSGTCPQCK 625
            S  PAS  +I SLPQ       L+        NQ C IC ++F  G+ V  L CLHL+HT CID WLQ S TCP C+
Sbjct:  394 SRPPASEDLIHSLPQVYFGQAHLAQ-------NQNCIICCNEFNFGDAVTNLPCLHLFHTACIDSWLQRSATCPVCR 463          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.75.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR18_ECTSI3.950e-3344.31RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L176_9PHAE1.420e-2748.87RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S0MHN6_9CRYP6.560e-1448.61Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
L1J3G9_GUITC2.450e-1045.45RING-type domain-containing protein (Fragment) n=1... [more]
A0A835Z4Y2_9STRA2.620e-1058.33RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A812WA01_SYMPI7.080e-1047.22FAM151B protein n=1 Tax=Symbiodinium pilosum TaxID... [more]
B7PZI8_IXOSC8.590e-1052.08RING finger motif containing protein n=15 Tax=Ixod... [more]
A0A443SP47_9ACAR1.010e-950.00RING finger protein 11-like protein n=2 Tax=Parasi... [more]
A0A7S1F924_NOCSC1.140e-943.59Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A8C4WXD9_EPTBU1.390e-946.75RING-type domain-containing protein n=2 Tax=Eptatr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 526..546
NoneNo IPR availableGENE3D2.30.30.380coord: 236..286
e-value: 1.5E-7
score: 33.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..164
NoneNo IPR availablePANTHERPTHR45931SI:CH211-59O9.10coord: 82..628
NoneNo IPR availablePANTHERPTHR45931:SF3SI:CH211-59O9.10coord: 82..628
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 583..628
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 584..624
e-value: 2.6E-6
score: 37.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 583..625
e-value: 4.8E-11
score: 42.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 584..625
score: 11.132002
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 241..265
e-value: 2.0E-5
score: 34.0
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 243..262
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 537..629
e-value: 3.3E-19
score: 70.3
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 239..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig88contigP-littoralis_Contig88:332465..335999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig88.75.1mRNA_P-littoralis_Contig88.75.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig88 331375..336089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig88.75.1 ID=prot_P-littoralis_Contig88.75.1|Name=mRNA_P-littoralis_Contig88.75.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=630bp
MDAVGWRCECCKHTVPIDNRKVHEAHCRPPNPPSPPPTPTPSQQPSPLSP
FDPDEGPRSPNVFTPTTTPPRQQLTLPPPPPPHQQQQQQQQPPVAAAPSQ
PPWREVDMVAARSRREEVEQQATAAGAQEREQVELRRQVQEAASVVATTR
EREHEHERRRQQWPQGLRQRMQQRGQGQREGVVALPSRSSSSSSSSAESS
HVFRGSNAAAARAGVGAEGGVWRGGGGAAAGARAGGEEAETTWACNACTF
LNDLGISRCEMCGTRMSPQQRPPDNTYRNTLIDAVDTHPASVRSRRWRLA
DTVGGFEAAAEEERCRLVAEDATARGIGGGGGISTSGGHTGGRAAAGEGG
GDDDDDGPIDTGGAISGAAAGSALGALGAGLLSAIRPGARPSSVVSSMLQ
GALVGGVAGAALGAAPETPGAGGGGGTNSNNRAAGGGTTFHEQRRQLVVE
LMAGPTRGARAGGNAAGVDSDTESFMLAQRLEELNLPEEAAFMLAQRLEE
LDLPEQASALRRELMLETVEGPRGIVHRRRSRMQRLRQQQQQEQDEDSST
RPASAPVIASLPQETVTADSLSHLNGKNGGNQQCCICLDDFAVGEGVKRL
QCLHLYHTVCIDHWLQTSGTCPQCKKRVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR001876Znf_RanBP2
IPR013083Znf_RING/FYVE/PHD
IPR036443Znf_RanBP2_sf