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Homology
BLAST of mRNA_P-littoralis_Contig88.37.1 vs. uniprot
Match: D8LPM2_ECTSI (TPR repeat-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM2_ECTSI) HSP 1 Score: 129 bits (325), Expect = 8.730e-30 Identity = 65/79 (82.28%), Postives = 69/79 (87.34%), Query Frame = 0
Query: 1 MDAILGLLGICGANCAEDRDPEVKERAGEMADTVEDDPATRARRVYHMGNLLQKRGEVKEAAKMYRSAVKLDPTHKASH 79
MDAILGLLGICGANCAEDRD + K R + +EDDP+TRARRVYHMGNLLQKRGEVKEAAKMYRSAVKLDP HKASH
Sbjct: 1 MDAILGLLGICGANCAEDRDADSKGRTEGVEQALEDDPSTRARRVYHMGNLLQKRGEVKEAAKMYRSAVKLDPAHKASH 79
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 42..75
e-value: 0.0014
score: 27.9
coord: 212..245
e-value: 9.6E-7
score: 38.4
coord: 76..109
e-value: 4.5E-4
score: 29.5
coord: 110..143
e-value: 17.0
score: 12.8
coord: 144..177
e-value: 0.0022
score: 27.2
coord: 178..211
e-value: 3.6
score: 16.6 |
| IPR019734 | Tetratricopeptide repeat | PFAM | PF13181 | TPR_8 | coord: 146..175
e-value: 0.016
score: 15.4
coord: 182..210
e-value: 0.06
score: 13.6
coord: 43..75
e-value: 0.011
score: 15.8 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 144..177
score: 8.9389 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 42..75
score: 11.180901 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 178..211
score: 9.1749 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 212..245
score: 10.944901 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 76..109
score: 11.298901 |
| IPR001440 | Tetratricopeptide repeat 1 | PFAM | PF00515 | TPR_1 | coord: 212..244
e-value: 1.2E-8
score: 34.4 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 143..262
e-value: 3.6E-28
score: 100.1 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 19..142
e-value: 9.1E-28
score: 99.6 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 44..245 |
| None | No IPR available | PFAM | PF13414 | TPR_11 | coord: 88..123
e-value: 8.8E-9
score: 34.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 390..425 |
| None | No IPR available | PROSITE | PS50293 | TPR_REGION | coord: 76..108
score: 9.496367 |
| None | No IPR available | PROSITE | PS50293 | TPR_REGION | coord: 212..244
score: 9.024772 |
| IPR037919 | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit | PANTHER | PTHR44366 | UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT | coord: 47..190
coord: 181..248 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig88.37.1 ID=prot_P-littoralis_Contig88.37.1|Name=mRNA_P-littoralis_Contig88.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=426bp
MDAILGLLGICGANCAEDRDPEVKERAGEMADTVEDDPATRARRVYHMGN
LLQKRGEVKEAAKMYRSAVKLDPTHKASHYNLGIALQELGELDEAASCYE
KAIGLSPDYVLAHYNLAYVRQDQVRLMEAAQHFRVAADLDPTDVDIHISL
GNVLRQGGESTAAIVAYERALELDNSSRMAAYNLGGILQDNFEEERAIEC
FDRTIKIDPDYADAHYNRGICLETVGRYEEALVSYTEAQRLDPSTEEAAE
QAERVRILLACQPAVNAAAAPVAAARGVPGGAPAAFTGAVPSTLPNVAEE
DEDVVATATRAATAAKVEADKKERMAQQAAHAAYQATRAAAAANAAAESA
AALISPASKAAAGIVVGGGGGADSSVPAALALADVQPPTVMRKGAERDSD
SMSVDLSAQVLPPVGLRDDHRPRDD* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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