prot_P-littoralis_Contig861.14.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig861.14.1
Unique Nameprot_P-littoralis_Contig861.14.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length153
Homology
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BLAST of mRNA_P-littoralis_Contig861.14.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.380e-13
Identity = 38/90 (42.22%), Postives = 44/90 (48.89%), Query Frame = 0 
Query:    4 CSNGLAGFEGTSSDRVTACCPFGCNQCGGAGCNMSGLTAGYGSEDCCITGGVEFQKHCDATGAAPCVIND---------QRCSNGLPGFE 84
            CSNGL G +G        CCP GC QCGG GCN SG  AG     CC        K+CD T  APC+I           + CSNG+ G +
Sbjct:  270 CSNGLEGIDGNG----VVCCPLGCGQCGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSETCSNGVEGID 355
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig861.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JC43_9PHAE2.380e-1342.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig861contigP-littoralis_Contig861:65291..67155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig861.14.1mRNA_P-littoralis_Contig861.14.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig861 65291..67155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig861.14.1 ID=prot_P-littoralis_Contig861.14.1|Name=mRNA_P-littoralis_Contig861.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=153bp
DGKCSNGLAGFEGTSSDRVTACCPFGCNQCGGAGCNMSGLTAGYGSEDCC
ITGGVEFQKHCDATGAAPCVINDQRCSNGLPGFEEKNKCCIYDIVDSWTF
CHDTETAPCVVNGYPDCTGEHPWIGDGMCDKDPSTFGDLNVPECGYDGGD
CCA
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