prot_P-littoralis_Contig86.140.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.140.5
Unique Nameprot_P-littoralis_Contig86.140.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length565
Homology
BLAST of mRNA_P-littoralis_Contig86.140.5 vs. uniprot
Match: D8LTF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF9_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 5.040e-114
Identity = 285/613 (46.49%), Postives = 333/613 (54.32%), Query Frame = 0
Query:    1 MVLTRKQAWRRVRVVRHVGAHSDTCAVEMTREDSAXXXXXXXKKPLAGDWMRQVTQRPQHRPSEPQTISASP-----REHRSDSSSSXXXXXXXXSASSPNERTALDNWRLPKEGRKPSARPGVSAARRQAMGACVRVGSRVSFNTVVAAILIPSAKDLHSAARQQLWWQETDYRDFRINFIQFMRSPPEDAA---DVPDVVPVVEIARETKPIAEKDQKTADD----VQQLVVVDAVVYEDAAPGTEEVCAWPVSS--------ADVKNSASSSSLSDADTSXXXXXXXXXXXXXXXXXXXXESVEIAVVGVSCAAXXXXXXXXXXXXXXMSISSDDNGGEGSQD------------GATTAVDATVSDQAVRRQGSTGAISEKSGGSCNLGWSSSDEGNDADEE------------MDDDGNTVRSRRSFSNLETARRGGAG-------LTTAIPSNDLSDFDENSDDVESGSASGSDTGGRRPRALSLDGWFTCGLENGLDTKSYETHDHAGRLRDLVKLDPLPVACATPPLAKSVSYREVDLNDALRRLRLMFDVSVNGD--VAK-MKAYDE---SGHVTGGSQCRPENSGITE--GRELSPSSSTAPA 554
            M LTRKQAWRRVRVVRH     +T   E       XXX    K+P A DW+RQ+TQRP                   R  RSDSS S        + S   ER ALDNWRLPKEGR PSARPG SAA+RQA  ACVRVGSRVSFNTVVAAILIPSAKDLH+AARQ+LWWQETDYRDFRINFIQFMRSPP  AA   + P++VPV EI  E+K   +++          VQQ VVVDA VYEDA   TE+V AWPV S        + +    SS+SLSD+DTS                    +        +SC                 S++ +                      A  A      D+ V R GS G     S  SC+LGWSS DEGN ADE+                GNT+R RR+FSNLETARRGG         LT  +  +D SD  +           GS     RPRALSLDGWFTCGLENG++ KSYETHDHAGRLRDLVKL PLP  C TPPL  + + +EVDLNDALRRL + F+VSV G   VA+  K+ D+    G   G ++CR E     +   R  SPS++ A A
Sbjct:    1 MPLTRKQAWRRVRVVRHEVVSGETKDDEXXXXXXXXXXCA--KRP-ASDWIRQMTQRPXXXXXXXXXXXXXXXXXXXRTERSDSSDSA-------TRSPERERDALDNWRLPKEGRHPSARPGASAAKRQAAAACVRVGSRVSFNTVVAAILIPSAKDLHAAARQELWWQETDYRDFRINFIQFMRSPPAAAAAAGEGPELVPV-EIVAESKSSQDEEXGKVXXXXXXVQQPVVVDAAVYEDAR-ATEKVRAWPVQSEPELALPPSGLLAKPSSASLSDSDTSPPTPPSEPGTLTSPSDGGESDEPVETAADISCCPASSSLPPVSQEPLPPSLTYEXXXXXXXXXXXXXXXXXXXAPAADIAKGRWQDDEEVERAGS-GVQHGGSSPSCSLGWSSPDEGNTADEDGXXXXXXXXXXXXXXXGNTIRVRRAFSNLETARRGGXXXXXXXXXLTALVSVDDSSDGGDXXXXXX-----GSGRHHDRPRALSLDGWFTCGLENGVNAKSYETHDHAGRLRDLVKLAPLPAVCPTPPLMDANANQEVDLNDALRRLGVTFNVSVKGGDGVARGRKSLDDMGAGGDNGGETKCRAEGDCDDDDVARGFSPSAAAAAA 595          
BLAST of mRNA_P-littoralis_Contig86.140.5 vs. uniprot
Match: A0A6H5JK69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK69_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 1.270e-98
Identity = 272/607 (44.81%), Postives = 321/607 (52.88%), Query Frame = 0
Query:    1 MVLTRKQAWRRVRVVRHVGAHSDTCAVEMTREDSAXXXXXXXKKPLAGDWMRQVTQRPQHR----PSEPQTISASPREHRSDSSSSXXXXXXXXSASSPNERT--ALDNWRLPKEGRKPSARPGVSAARRQAMGACVRVGSRVSFNTVVAAILIPSAKDLHSAARQQLWWQETDYRDFRINFIQFMRSPPEDAA---DVPDVVPVVEIARETKP----IAEKDQKTADDVQQLVVVDAVVYEDAAPGTEEVCAWPVSSAD----------VKNSASSSSLSDAD-------TSXXXXXXXXXXXXXXXXXXXXESVEIAVVGVSCAAXXXXXXXXXXXXXXMSISSDDNGGEGSQDGATTAVDAT-------VSDQAVRRQGSTGAISEKSGGSCNLGWSSSDEGNDADEEMDDDGNTVRSRRSFSNLETARRGG-------------AGLTTAIPSNDLSDFDENSDDVESGSASGSDTGGR--RPRALSLDGWFTCGLENGLDTKSYETHDHAGRLRDLVKLDPLPVACATPPLAKSVSYREVDLNDALRRLRLMFDVSVNGDVA---KMKAYDE---SGHVTGGSQCRPENSGITE-GRELSPS 548
            M LTRKQAWR+VRVVRH     +T       E   XXXXX  K+P A DW+RQ+TQRPQ +    PS P    A+ R  RSDSS S         A+   ER   ALDNWRLPKE R PSARPG SAA+RQA  ACVRVGSRVSFNTVVAAILIPSAKDLH+AARQ+LWWQETDYRDFRINFIQFMR+PP  AA   + P++VPV EI  E+K                VQQ VVVDA VYEDA   TE+V AWPV S             K S+++S  S          +                     ESVE A   +SC                 S + ++     S    TT+V A          D+ V R GS G     S  SC+LGWSS+DEGN ADE+ + D                                 +GL+  +  +D SD                  GG   RPRALSLDGWFTCGLENG++ KSYETHDHAGRLRDLVKL PLP  C TPPL  + + +EVDLNDALRRL + F+VSV G  +   + K+ D+    G   G ++C  E     +  R LSPS
Sbjct:    1 MPLTRKQAWRKVRVVRHEVGSGET----KDDEXXXXXXXXCAKRP-ASDWIRQMTQRPQQQLLREPSPPPRTPAA-RTERSDSSDS---------ATRSPERAGDALDNWRLPKERRHPSARPGASAAKRQAAAACVRVGSRVSFNTVVAAILIPSAKDLHAAARQELWWQETDYRDFRINFIQFMRTPPAAAAAAGESPELVPV-EIVAESKSSXXXXXXXXXXXXXXVQQPVVVDAAVYEDAR-ATEKVRAWPVESEPELALPPSGLLAKQSSATSPSSXXXXXXXXXTSPPTPASEPGTLTTSSDGGESDESVETAA-DISCCPALSSLPPVSPEPLPPSSTYEEQSVT-SLSSTTTSVPAADIAMGRWQDDEEVERGGS-GVQHGGSSPSCSLGWSSTDEGNTADEDGEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLSALVSGDDSSDGXXXXXXXXX-------XGGHHDRPRALSLDGWFTCGLENGVNAKSYETHDHAGRLRDLVKLAPLPAVCPTPPLMDANANQEVDLNDALRRLGVTFNVSVKGGDSVSRRRKSLDDVGAGGEDGGETKCHAEGDCDDDIARGLSPS 580          
BLAST of mRNA_P-littoralis_Contig86.140.5 vs. uniprot
Match: D7G8G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G4_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.570e-9
Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  131 VRVGSRVSFNTVVAAILIPSAKDLHSAARQQLWWQETDYRDFRINFIQFMRSP 183
            VRVG +V F+T+VAA+LIPS+ DL  A +++LWWQ TDY +FR+N+   M +P
Sbjct:  158 VRVGEKVCFSTIVAAVLIPSSHDLTVATKRELWWQPTDYAEFRVNYATHMHNP 210          
BLAST of mRNA_P-littoralis_Contig86.140.5 vs. uniprot
Match: A0A6H5JH78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH78_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 4.090e-9
Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  131 VRVGSRVSFNTVVAAILIPSAKDLHSAARQQLWWQETDYRDFRINFIQFMRSP 183
            VRVG +V F+T+VAA+LIPS+ DL  A +++LWWQ TDY +FR+N+   M +P
Sbjct:  155 VRVGEKVCFSTIVAAVLIPSSHDLTVATKRELWWQPTDYAEFRVNYATHMHNP 207          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.140.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTF9_ECTSI5.040e-11446.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK69_9PHAE1.270e-9844.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8G4_ECTSI3.570e-954.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH78_9PHAE4.090e-954.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 529..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:523226..525897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.140.5mRNA_P-littoralis_Contig86.140.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 518664..530459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.140.5 ID=prot_P-littoralis_Contig86.140.5|Name=mRNA_P-littoralis_Contig86.140.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=565bp
MVLTRKQAWRRVRVVRHVGAHSDTCAVEMTREDSAAAAAAAAKKPLAGDW
MRQVTQRPQHRPSEPQTISASPREHRSDSSSSDGSSSCGSSASSPNERTA
LDNWRLPKEGRKPSARPGVSAARRQAMGACVRVGSRVSFNTVVAAILIPS
AKDLHSAARQQLWWQETDYRDFRINFIQFMRSPPEDAADVPDVVPVVEIA
RETKPIAEKDQKTADDVQQLVVVDAVVYEDAAPGTEEVCAWPVSSADVKN
SASSSSLSDADTSPPTPPVEQETPTSSNGDESDESVEIAVVGVSCAASSK
PPPLPLLSSSTMSISSDDNGGEGSQDGATTAVDATVSDQAVRRQGSTGAI
SEKSGGSCNLGWSSSDEGNDADEEMDDDGNTVRSRRSFSNLETARRGGAG
LTTAIPSNDLSDFDENSDDVESGSASGSDTGGRRPRALSLDGWFTCGLEN
GLDTKSYETHDHAGRLRDLVKLDPLPVACATPPLAKSVSYREVDLNDALR
RLRLMFDVSVNGDVAKMKAYDESGHVTGGSQCRPENSGITEGRELSPSSS
TAPAASAAGSNSFS*
back to top