prot_P-littoralis_Contig859.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig859.17.1
Unique Nameprot_P-littoralis_Contig859.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1063
Homology
BLAST of mRNA_P-littoralis_Contig859.17.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 1.870e-124
Identity = 486/784 (61.99%), Postives = 520/784 (66.33%), Query Frame = 0
Query:   89 APNGMATQYGVVVWPSLPGLQQAAVGVAPPASPPSALSGLA---HRMG-APGRGGMIGSELQPQGLPAGAVAPPGIHGDWGDGAGGAATPAKARRSKA-RANSGGKKSAGNNHSSEMGM-ILSDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLFENRQPRPKLLPL-AMWPKEAQE-GHAAAAAVHXXXXXXXXXXHAGVGSEAPHAPLSATNNAAASSPAATSPVANGINRLLAVGGHTQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGPTTLPASTTTVAGIAGEGARSPSPPRPAPATRPTVKTGGGKPKGRAV-VRPIADLVLPSGAAQLSLEERAKAYRRAQEAAAAGMAAAKAFVEGDFSTDSNGGLLSAKATALPAGEPKQGMAATAAAGGVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------NKAGTPTTP-HP----------------GMSPQGMAPXXXXXXGVPMAYHPQYGIYSPYPQSLYAAYLAQYQLQQGVNPYEGMGMNPYEXXXXXXXXXXX-----------------------APGSGASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTQGTPSLPGVTG-SVPFAVTAAAG-----EKQRPKENEDAKQLAVETLLGLKNSQGSKGGGPIDEASAQAVV 810
            APNG+ATQYGVVVWPSLPGLQQAAVGVA      SALSG+    HRM  A GRGGM+G  ++  GLPAGAV PPG  GDW  G G   TP K RR+KA RANS GKKS  N+ ++E G  + +DRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDL ENRQ RPKL+ +  MWPK+AQ+ GHAA                                                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +AG G   P+ P P  A R + K+GG KP+ +A  VRPIADLVLPSGAAQLSLE RA AYRRAQEAAAAGMAAA+AFVEG++ TD NG  LSAK+TALP G+      + +A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        KAG P  P HP                GM PQGMAP      GVPMAYHPQYG+YSPYPQSLYAAYLAQYQLQQGVNPYEGM MNPYE  XXXXXXXXX                       A G+ A+ A     XXXXXXX         XXXXXXXXXXXXXXXX            LPGV G ++P AV A        EK R KENEDAKQLAVETLLGLKNSQGSKGGGP+DEASAQAVV
Sbjct:   82 APNGLATQYGVVVWPSLPGLQQAAVGVAXXXXX-SALSGVPAAHHRMPTAAGRGGMVGPGMEQPGLPAGAV-PPGPPGDW-SGIGRTMTPVKGRRTKAQRANSSGKKS--NDPNTEGGGDVTNDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQSRPKLIQVPTMWPKDAQQQGHAAXX---------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVAGGGPNGPTSPSPGAAKRASPKSGGVKPRHKAGGVRPIADLVLPSGAAQLSLEARAGAYRRAQEAAAAGMAAARAFVEGEYPTDGNGEFLSAKSTALPTGQGATAAPSDSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGAPAPPQHPPAAGSGAXXXXXXXXXGMPPQGMAPGM----GVPMAYHPQYGMYSPYPQSLYAAYLAQYQLQQGVNPYEGMSMNPYEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAVATSAPAGGAXXXXXXXGPAPPAVSGXXXXXXXXXXXXXXXX------------LPGVKGLALPPAVAAXXXXXXXXEKPRRKENEDAKQLAVETLLGLKNSQGSKGGGPMDEASAQAVV 781          
BLAST of mRNA_P-littoralis_Contig859.17.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 5.980e-113
Identity = 442/794 (55.67%), Postives = 474/794 (59.70%), Query Frame = 0
Query:   89 APNGMATQYGVVVWPSLPGLQQAAVGVAPPASPPSALSGLA---HRM--GAPGRGGMIGSELQPQGLPAGAVAPPGIHGDWGDGAGGAATPAKARRSKARANSGGKKSAGNNHSSEMGMILSDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLFENRQPRPKLLPL-AMWPKEAQE-GHAA---------AAAVHXXXXXXXXXXHAGVGSEAPHAPLSATNNAAASSPAATSPVANGINRLLAVGGHTQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGPTTLPASTTTVAGIAGEGARSPSPPRPAPATRPTVKTGGGKPK-GRAVVRPIADLVLPSGAAQLSLEERAKAYRRAQEAAAAGMAAAKAFVEGDFSTDSNGGLLSAKATALPAGEP---KQGMAATAAAGGVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAGTPTTP---------------------------HPGMSPQGMAPXXXXXXGVPMAYHPQYGIYSPYPQSLYAAYLAQYQLQQGVNPYEGMGMNPYEXXXXXXXXXXX--------------------APGSGASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTQGTPSLPGVTGSVPFAVTAAAG-----EKQRPKENEDAKQLAVETLLGLKNSQGSKGGGPIDEASAQAVV 810
            APNG+ATQYGVVVWPSLPGLQQAAVGVAPPA+  SALSG+A   HRM  GA GRGGM+G  ++  GLPAGAV PPG  GDW  G G   TP +                        G + +DRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDL ENRQ RPKL+ +  MWPK+AQ+ GHAA         A A  XXXXXXXX  H   G EA      A N  A S+         G N            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             P  A R + K+GG KP+      RPIADLVLPSGAAQLSLE RA AYRRAQEAAAAGMAAA+AFVEG++ TD +G  LSAK+TALP G+P   KQG  A        XXXXXXXXXXXX        XXXXXXX X             A                                 G                                HPGM PQGMAP      GVPMAYHPQYG+YSPYPQSLYAAYLAQYQLQQG+NPYEGM +NPYE   XXXXXXXX                    +P + A+        XX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        L     ++P AV A        EK R KENEDAKQLAVETLLGLKNSQGSKGGGP+DEASAQAVV
Sbjct:   82 APNGLATQYGVVVWPSLPGLQQAAVGVAPPAAS-SALSGVAAAHHRMPTGA-GRGGMLGPGMEQPGLPAGAV-PPGAPGDW-SGIGRTMTPGR------------------------GDVTNDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQSRPKLIQVPTMWPKDAQQQGHAAXXXXXXXXXATAHAXXXXXXXXTMHVAAGGEA------ALNAGAPSA---------GTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP----------------------------PGAAKRASPKSGGVKPRHXXXXXRPIADLVLPSGAAQLSLEARAGAYRRAQEAAAAGMAAARAFVEGEYPTDGSGEFLSAKSTALPTGQPGGQKQGATAAXXXXXXXXXXXXXXXXXXXVPSALSSPXXXXXXXEXASASLATAMDTTAATGGGVSAPCTSAPPGSAAGLPPPAAVGVPSTATGADQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPGMPPQGMAPGM----GVPMAYHPQYGMYSPYPQSLYAAYLAQYQLQQGINPYEGMSINPYEGMNXXXXXXXXXXXXXXXXXXXXXXSPATTTSPAAAAAAGAAPTPAXXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-----ALPPAVAAXXXXXXXXEKPRRKENEDAKQLAVETLLGLKNSQGSKGGGPMDEASAQAVV 795          
BLAST of mRNA_P-littoralis_Contig859.17.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.990e-6
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0
Query:  205 SDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 258
            S RD  + LR +CD C R+KR CDG  PC+ C RR +PC  S ++KSGP KG+K
Sbjct:   10 SRRDPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTK 63          
BLAST of mRNA_P-littoralis_Contig859.17.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 5.920e-6
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query:  207 RDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 258
            +D  V LR +CD C R+KR CDG  PC+ C RR +PC  S ++KSGP KG+K
Sbjct:    4 QDPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTK 55          
BLAST of mRNA_P-littoralis_Contig859.17.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 2.340e-5
Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 0
Query:  208 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 258
            D  V+LR +CD C R+KR CDG  PC+ C RR   C  S K+KSGP KG+K
Sbjct:   57 DGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTK 107          
BLAST of mRNA_P-littoralis_Contig859.17.1 vs. uniprot
Match: F7W882_SORMK (WGS project CABT00000000 data, contig 2.43 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) TaxID=771870 RepID=F7W882_SORMK)

HSP 1 Score: 52.8 bits (125), Expect = 6.950e-5
Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 0
Query:  211 VVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIA 263
              ++ ACDACHR K KCDG+ PC  C      C Y+   +   PKGS+ K+I+
Sbjct:    3 TAVKRACDACHRRKVKCDGINPCRNCHASQLTCTYNAIPQKKGPKGSRAKVIS 55          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig859.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LM00_ECTSI1.870e-12461.99Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE5.980e-11355.67Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI1.990e-653.70Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L009_9PHAE5.920e-653.85Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LPZ9_ECTSI2.340e-554.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F7W882_SORMK6.950e-543.40WGS project CABT00000000 data, contig 2.43 n=1 Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 211..254
e-value: 2.9E-5
score: 33.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 216..250
e-value: 7.0E-7
score: 29.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 216..243
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 216..245
score: 10.271
IPR001138Zn(2)-C6 fungal-type DNA-binding domainCDDcd00067GAL4coord: 214..246
e-value: 1.69412E-10
score: 54.9769
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 211..268
e-value: 7.5E-10
score: 40.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 209..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1045..1062
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..450
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..630
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 860..922
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..621
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 860..875
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1029..1062
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig859contigP-littoralis_Contig859:50619..55915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig859.17.1mRNA_P-littoralis_Contig859.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig859 48450..56186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig859.17.1 ID=prot_P-littoralis_Contig859.17.1|Name=mRNA_P-littoralis_Contig859.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1063bp
MSQQVQGTDPSTAAAAAPPVTSSAPLIAPTVHPTTASAAGSPSPATAVAP
APAASPPAPAPPTPTTQAVVPPPTAAGGGGAPPPAAATAPNGMATQYGVV
VWPSLPGLQQAAVGVAPPASPPSALSGLAHRMGAPGRGGMIGSELQPQGL
PAGAVAPPGIHGDWGDGAGGAATPAKARRSKARANSGGKKSAGNNHSSEM
GMILSDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQK
SGPPKGSKRKLIAADEDLFENRQPRPKLLPLAMWPKEAQEGHAAAAAVHA
AATAAQAAAHAGVGSEAPHAPLSATNNAAASSPAATSPVANGINRLLAVG
GHTQQQQQPQQPQQPQQQPQAPRLPGISLRSDGNSSNGTGAAAAAAAVAA
ASAANVGPTTLPASTTTVAGIAGEGARSPSPPRPAPATRPTVKTGGGKPK
GRAVVRPIADLVLPSGAAQLSLEERAKAYRRAQEAAAAGMAAAKAFVEGD
FSTDSNGGLLSAKATALPAGEPKQGMAATAAAGGVPSTSSSSPTSAAVGT
AASSPPTATGTTPGESTAASLAAVGITPAVSSPPAAVAAASAAAAATAAA
QQQQQQQQQNKAGTPTTPHPGMSPQGMAPGMAPGMGVPMAYHPQYGIYSP
YPQSLYAAYLAQYQLQQGVNPYEGMGMNPYEGMNPYAGMNPYAPGSGASG
AASSTAASVAAAETTAVATSTGTGADTAAAAAAAAAAAAAAAKPTQGTPS
LPGVTGSVPFAVTAAAGEKQRPKENEDAKQLAVETLLGLKNSQGSKGGGP
IDEASAQAVVAAAAAAAAAAAAAAGGTNEGSAASAAAAAAAITAKAVAAA
VAEAGADTGSDPLSSSSTDTDASASKGKSVEAPAVGEGKGPPETFTQENA
PALAPAASSGTEEKPSDAPSALTVTPAVAAVATGAVVDTVASQEKEVTQA
APAAPAVPAAPAAPAAAPAPVAPIIAAVAPAGPSVGAQNWAPVHGGPEEA
ATEAVEGSVQPTATAETGVAHAAAPAAVEAAADCADGQAPMDVQGPGSSP
ASESQTVASSVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf