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Homology
BLAST of mRNA_P-littoralis_Contig85.53.1 vs. uniprot
Match: A0A6H5J6J5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6J5_9PHAE) HSP 1 Score: 365 bits (938), Expect = 5.460e-110 Identity = 268/370 (72.43%), Postives = 300/370 (81.08%), Query Frame = 0
Query: 69 SATEATPPT--------TSGFGATKGNKAVSKRRHVIGLHSKNFVQKVQCMRPMDWRKVLLELEAAEEASDADPKTCGITTYMYASCISRMAKARRWKEALGILERMRARGLKPSSYCMXXXXXXXXXXXXXXXXXXXXXLRRKDLGEKAG-DDXXXXXXXXXXXXXXXXXXXXXXXEEMKAGGNTPHPYXXXXXXXXXXXXXXXXXXXXXXXXXRQARVHVDGFIDAFCVKTTIAALAKSGKWKQALKIYVEMVEVLPRNRDGIAGANLGINALREASLACGRVGNWKASLKLLDEMRATAITPESGCYEAAMKSCVRNKKWERAISLMDEMVDVYGVQPELGAXNVAISAAGSASLWPKAVKMLGQAR 429
SA +T PT T+G A + V KR ++ GLHSKNFVQKVQCMRP DWR VL EL+ AEEASDA P ITT+MYASCISRMAKARRW+EAL IL+RMRARGL+P+SYC+ XXXXXXXXXXXXXXXXXX RR+DLGE + D+XXXXXXXXXXXXXXXXXXXXXXX E+K GG TPHP+XXXXXXXXXXXXXXXXXXXXXXXX RQARV DGFID +CVKTTI ALAKSGKWKQALKIY+EM++VLP N D ANL ++ALR+AS ACGR G+WKASLKLLDEMRA AITPESGCY+AAM+SCVRN++WERA L+DEM YG+ P+L VAISAAG ASLWPKA KML Q R
Sbjct: 3 SAGTSTSPTPTQPLSEDTAGSSAAR-RLGVIKRANIAGLHSKNFVQKVQCMRPTDWRGVLRELQIAEEASDAQPSESRITTFMYASCISRMAKARRWEEALDILQRMRARGLQPNSYCVSSAXXXXXXXXXXXXXXXXXXXRREDLGEGSPVDEXXXXXXXXXXXXXXXXXXXXXXXXELKVGGKTPHPFXXXXXXXXXXXXXXXXXXXXXXXXMRQARVRTDGFIDVYCVKTTITALAKSGKWKQALKIYLEMLDVLPANSDS-PEANLNLDALRDASFACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQSCVRNRQWERATCLIDEMTLTYGMVPDLETYQVAISAAGCASLWPKATKMLRQMR 370
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 189..209 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 55..85 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 55..87 |
| None | No IPR available | PANTHER | PTHR47942 | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | coord: 417..622
coord: 340..549
coord: 609..854
coord: 525..697
coord: 141..315
coord: 286..451 |
| IPR033443 | Pentacotripeptide-repeat region of PRORP | PFAM | PF17177 | PPR_long | coord: 474..636
e-value: 3.1E-9
score: 36.4
coord: 346..465
e-value: 4.1E-7
score: 29.5 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 439..472
e-value: 6.4E-6
score: 24.0
coord: 477..507
e-value: 0.0029
score: 15.6
coord: 217..244
e-value: 4.8E-4
score: 18.1
coord: 142..175
e-value: 3.2E-6
score: 24.9
coord: 579..611
e-value: 3.9E-4
score: 18.4
coord: 544..576
e-value: 0.0015
score: 16.6
coord: 368..398
e-value: 5.1E-4
score: 18.0 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF01535 | PPR | coord: 143..172
e-value: 0.006
score: 16.8
coord: 294..315
e-value: 0.052
score: 13.8
coord: 217..242
e-value: 0.0027
score: 17.8
coord: 250..277
e-value: 0.026
score: 14.8 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 506..540
score: 9.229472 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 541..575
score: 10.336563 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 436..470
score: 12.627475 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 212..246
score: 9.96388 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 140..174
score: 10.775016 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 471..505
score: 8.900633 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 576..610
score: 9.996763 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 323..466
e-value: 6.5E-27
score: 96.8 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 474..676
e-value: 2.0E-40
score: 141.1
coord: 677..862
e-value: 1.1E-22
score: 82.8 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 100..204
e-value: 4.7E-13
score: 50.9
coord: 205..322
e-value: 1.8E-17
score: 65.2 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig85.53.1 ID=prot_P-littoralis_Contig85.53.1|Name=mRNA_P-littoralis_Contig85.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=864bp
MAFVTSPATHSEYPWLPNLPQWRSAAAVRAHVTVRGARQLVAAAPAAATA
SVATSTTTTPTAASPTPLSATEATPPTTSGFGATKGNKAVSKRRHVIGLH
SKNFVQKVQCMRPMDWRKVLLELEAAEEASDADPKTCGITTYMYASCISR
MAKARRWKEALGILERMRARGLKPSSYCMSSAIKACGAKKQWKEALKLLE
LRRKDLGEKAGDDYCMSAAIYACGNSGETEKALELLEEMKAGGNTPHPYA
YTAAISSCGNSMLDDKATQLFEEMRQARVHVDGFIDAFCVKTTIAALAKS
GKWKQALKIYVEMVEVLPRNRDGIAGANLGINALREASLACGRVGNWKAS
LKLLDEMRATAITPESGCYEAAMKSCVRNKKWERAISLMDEMVDVYGVQP
ELGAYNVAISAAGSASLWPKAVKMLGQARHYGLQPDPTTYSAVVTACGKA
GAWQESLRLLEDMREVGVEPNCYNFRAAMTACGKAGQWQRAVGLLGEMKG
GGLELDVSAYNTAIMACIGSVRGAEASALLGEMRAAGVEPSADTYRLVII
ACGKSGMWEQSTAHLREMVEQGLSPNSLIYASIITGFGHAKEWDNALEFL
AGMPAAGVEPNLHHFNAALQACDWSGQGEAAARLLRGMEEEYGVRPDWNS
YAFAVSACAFGGQDELALELLGETKKLSASGAPPRSRLYESALRACGNSP
GGSQWRQAKELLDEARGTGVALSVRAYNNAMKAAAAAGEVDEVVARLAEV
REAGGGLKPDCVSFSWALPALASQERWDETLELVEELRGGGLLRGRFSYA
VVVTALAAAGRWEETCVALEAMLVTGVSMNDDTAAEIAGSMEGRDGSEKA
YELLGKVKAAAAS* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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