prot_P-littoralis_Contig846.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig846.1.1
Unique Nameprot_P-littoralis_Contig846.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length121
Homology
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: D7FZV0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV0_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 3.510e-50
Identity = 76/119 (63.87%), Postives = 87/119 (73.11%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCGD 119
            G+C ELRI STS  +F E+RGHGGNLYFE TIVTSWD   +KPQE Y GGRSF+ CVSE+L  +D            TCA  + GECRMDIIDSEMGYLGY  SE+YG+TWKVRG+C D
Sbjct:    5 GNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKGGRSFIRCVSEVLTGED------------TCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD 111          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.920e-46
Identity = 73/119 (61.34%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCGD 119
            GDCDELRI+ST   ++ E+RGHGG++YF  T+VTSWDT  KKPQE Y GGRSF+NCVSE L            E+C   AK D+GECRMDII+SEMGY+G+ ++ESYG+TWKVRG+C D
Sbjct:   42 GDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKL----------TGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKD 150          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 2.760e-45
Identity = 75/119 (63.03%), Postives = 86/119 (72.27%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCGD 119
            G+C ELRI STS  +F E+RGHGGNLYFE TIVTSWD   +KPQE Y  GRSF+ CVSE+L  +D            TCA  + GECRMDIIDSEMGYLGY  SE+YG+TWKVRG+C D
Sbjct:   76 GNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGED------------TCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD 182          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 5.010e-44
Identity = 76/127 (59.84%), Postives = 90/127 (70.87%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWK--------VRGYCGD 119
            GDC++LRI+ST S +F E+RGHGG+LYFE TIVTSWDT  K+PQE Y GGRSF+NCVSE L  DD          C   AK + GECRMDII+SE+ YLGY +SESYG+TWK        VRG+C D
Sbjct:   63 GDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDD----------CEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKD 179          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.450e-43
Identity = 73/119 (61.34%), Postives = 86/119 (72.27%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCGD 119
            GDCDELRI+ST   +F E+R HGG++YFE TIVTSWDT  K PQ  Y GGRSF+NCVSE L            E C   A+ + GECRMDII+SE+GYLGY +SESYG+TWKVRG+C D
Sbjct:  151 GDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKL----------TGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKD 259          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.990e-43
Identity = 75/119 (63.03%), Postives = 89/119 (74.79%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCGD 119
            GDC++LRI+ST S +F E+RGHGG+LYFE TIVTSWDT  K+PQE Y  GRSF+NCVSE L  DD          C   AK + GECRMDII+SE+ YLGY +SESYG+TWKVRG+C D
Sbjct:  514 GDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDD----------CEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKD 622          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.200e-42
Identity = 71/118 (60.17%), Postives = 86/118 (72.88%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCG 118
            GDCDELRI+ST   ++ E+RGHGG++YF  T+VTSWDT  K+PQE Y GGRSF+NCVSE L            E+C   AK D GECRMDII+SEMGY+G+ +SESYG+TWKVR   G
Sbjct:   87 GDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKL----------TGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAG 194          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: A0A6H5KES9_9PHAE (MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES9_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 8.440e-33
Identity = 63/120 (52.50%), Postives = 79/120 (65.83%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCGDR 120
            GD DELR+ STS + F  LR HGG+L F  T V SWDT    P E  T GRS+++ +SE++ D+DE        +C   AK   GE RMDI  SE+GYLGY +SESYG+TWKVRG+C D+
Sbjct:   20 GDADELRLLSTS-ETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDE--------TCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDK 130          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 8.550e-32
Identity = 63/119 (52.94%), Postives = 77/119 (64.71%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCGD 119
            GD   LRI+ST S+++ E+RGHGG+L F  T VTSWDT EKK    Y   RSF+ CVSE L D  + C  +        A    GECRMDII SEMG +GY  +ESYG++WKVRGYC +
Sbjct:  467 GDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGH--------AVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSE 577          
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 2.600e-31
Identity = 61/120 (50.83%), Postives = 79/120 (65.83%), Query Frame = 0
Query:    1 GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGGRSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLGYPESESYGVTWKVRGYCGDR 120
            GD DELR+ STS   +  LR +GG+L F  T V SWDT    P  V T GRS+++ VSE++ D+DE C  +        AK   GE RMDI +SE+GYLG+ +SESYG+TWKVRG+C D+
Sbjct:  130 GDADELRLLSTSD-TYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDGRSYISAVSEIVTDEDESCEGH--------AKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig846.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZV0_ECTSI3.510e-5063.87Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FIU4_ECTSI1.920e-4661.34Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI2.760e-4563.03Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE5.010e-4459.84MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LRM4_ECTSI1.450e-4361.34Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI1.990e-4363.03Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE1.200e-4260.17MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KES9_9PHAE8.440e-3352.50MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
A0A6H5JNF5_9PHAE8.550e-3252.94MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LHA2_ECTSI2.600e-3150.83Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..119
e-value: 4.8E-21
score: 77.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig846contigP-littoralis_Contig846:23751..31508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig846.1.1mRNA_P-littoralis_Contig846.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig846 23751..31508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig846.1.1 ID=prot_P-littoralis_Contig846.1.1|Name=mRNA_P-littoralis_Contig846.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=121bp
GDCDELRIESTSSKNFQELRGHGGNLYFEKTIVTSWDTVEKKPQEVYTGG
RSFVNCVSELLDDDDEFCTTYNQESCTTCAKGDKGECRMDIIDSEMGYLG
YPESESYGVTWKVRGYCGDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold