prot_P-littoralis_Contig845.12.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig845.12.3
Unique Name	prot_P-littoralis_Contig845.12.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	508

Homology

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BLAST of mRNA_P-littoralis_Contig845.12.3 vs. uniprot
Match: D8LJY4_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJY4_ECTSI)

HSP 1 Score: 473 bits (1216), Expect = 1.310e-159
Identity = 328/566 (57.95%), Postives = 355/566 (62.72%), Query Frame = 0

Query:    1 MAPSPHRPRVRPGPSKTKTPMRR-VCAESFDSDNDEAP--ARYLVSVRSAKNLKREGFRGLTNPYCQLNVGRQGPYTTDVVFDSVNPSWEHKRQTFEFREGKAPQEDKLTLACFNSGDVPELIGRLSVALSHATHKIISLPMFRKDLGGSQVWAGSVEIELHYIPEGDCGSPVEGSERGEEFLEDPNADGTCRGSGSLKRGSGGRSXXXXXXXSYPPLSPCST-----SLASSFVKAANALPEKARTCGAAS-AASAAVVQADLLALSPRTA-RGAESAVAAARGLRYAGRRGD---GTEK----------------------GTTGEIA----------------------GGXXXXXXXXXXXXXXXXXXXXSWKSFFSGVVCTALLVLGALWALGDPLLSGQFGLGLTVLEDGEAGQQAVVLINGSKISWLADRQVVFFVGEREVCRGGVPAPPPPMEGSSRMRDVWSSETLAAAXXXXXXXXXXXXXXXXGSTKRGSRRDVGRGQQQLKLQHGRCEICDSNDVTITCGRWCSFVRWQGDFVRRLAAPLYAARR---GRAPGT 506
            M P+PHR RVRP PS +K+P RR + AE  DSDNDEA   ARY VSVRSAKNLKREGFRGLTNPYCQLNVGRQGPYTTDVVFDSVNPSWE+ RQTFEFRE K PQEDKLTLACFNSGDVPELIGRLSVALSHATHK+ISLPMFRKDLGGSQVWAGSVEIELHYIPEG+ GSP  G   G   L++   D   RG  +                 YPP+SP        SLASSFVKAA +LP K RT G A   A+AA VQA+LLALSPRTA RG E   A +     A  R     GTEK                      G+   +A                        XXXXX               SWKSFF GVV +ALLVLG LWA+G PLLSGQ G GL VLEDGE G+QAVVLI+GSKI+ LADR +V FVGE+EVCRGGVPAP PP EGSS   D+WSS++ AA XXXXXXXXXXXXXXXXG                     GR E    N     CGRWCSF        RRLAAPLYAARR   G A GT
Sbjct:    1 MPPTPHRTRVRPSPSTSKSPRRRGLAAEFVDSDNDEASCCARYHVSVRSAKNLKREGFRGLTNPYCQLNVGRQGPYTTDVVFDSVNPSWENNRQTFEFREAKGPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQVWAGSVEIELHYIPEGEAGSPARGGRVGRPALDE--TDDVNRGGNNP----------------YPPMSPSXXXXXXXSLASSFVKAALSLPHKPRTSGGAGDGAAAAAVQAELLALSPRTATRGTEKKKAMSATKSPALARVSSLPGTEKAAXXXXXXXXXXXXXXXXSDRYGSAAAVAQEDLLPLSPRMARGAEAAXXXXXXXXXXXARGRGYSKGGSAGGWSWKSFFCGVVFSALLVLGGLWAVGVPLLSGQLGFGLRVLEDGENGRQAVVLIHGSKIAGLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAAAXXXXXXXXXXXXXXXXXG---------------------GREEHTGDNGGESDCGRWCSFCXXXXX-XRRLAAPLYAARREVGGGALGT 526

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig845.12.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig845.12.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LJY4_ECTSI	1.310e-159	57.95	C2 domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 39..139 e-value: 6.7E-6 score: 35.6
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 42..129 e-value: 2.2E-9 score: 37.5
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 39..184 e-value: 2.5E-13 score: 52.3
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 40..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 429..452
None	No IPR available	CDD	cd00030	C2	coord: 42..129 e-value: 2.48113E-13 score: 64.0103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig845	contig	P-littoralis_Contig845:51319..56731 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig845.12.3	mRNA_P-littoralis_Contig845.12.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig845 49045..56864 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig845.12.3 ID=prot_P-littoralis_Contig845.12.3|Name=mRNA_P-littoralis_Contig845.12.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=508bp
MAPSPHRPRVRPGPSKTKTPMRRVCAESFDSDNDEAPARYLVSVRSAKNL
KREGFRGLTNPYCQLNVGRQGPYTTDVVFDSVNPSWEHKRQTFEFREGKA
PQEDKLTLACFNSGDVPELIGRLSVALSHATHKIISLPMFRKDLGGSQVW
AGSVEIELHYIPEGDCGSPVEGSERGEEFLEDPNADGTCRGSGSLKRGSG
GRSSSSSNNNSYPPLSPCSTSLASSFVKAANALPEKARTCGAASAASAAV
VQADLLALSPRTARGAESAVAAARGLRYAGRRGDGTEKGTTGEIAGGGAA
EGGGGAGGGCGGRGGGGSWKSFFSGVVCTALLVLGALWALGDPLLSGQFG
LGLTVLEDGEAGQQAVVLINGSKISWLADRQVVFFVGEREVCRGGVPAPP
PPMEGSSRMRDVWSSETLAAAAGAAAAAAAGDGDGDGGSTKRGSRRDVGR
GQQQLKLQHGRCEICDSNDVTITCGRWCSFVRWQGDFVRRLAAPLYAARR
GRAPGTA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR035892	C2_domain_sf