prot_P-littoralis_Contig840.6.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig840.6.2
Unique Nameprot_P-littoralis_Contig840.6.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length422
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig840.6.2 vs. uniprot
Match: A0A6H5J9N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N6_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 4.720e-52
Identity = 134/319 (42.01%), Postives = 173/319 (54.23%), Query Frame = 0 
Query:  120 GKDEAGATLL-DNVNVRTGLWE-------------RQQATEALRIPASDVGADADARAGAGAAEEGHFQAVMKKCLPEERGGLISLRGQCSGGDDFTVSSGVVPSADGCYSAADGTDFGEGFFYTTDDADNKRSIYPKVITIGGESSYFWAASALVGFSNSDSIVIDCISVEPTSTHVHPAAASWSCDVDATGRLVNVTDEQFFLVCGCGTTATSGXXXXXXXXXXXXXXXXXXXXXXXS---------TTAPTATPGKVTA----TPA-SINPDTESEASGGSGLKAGPRGCSFLTASSGSAAAAVTLAAGVLCAALV 410
            G+D  G +LL D    R+  +E             R +  EA R P +D  ADAD         EG F   +   +  E  G++ LRGQCS GD FTV+S  +PS +GCY++  GT FGEGF Y+T+D+    +IYPK+IT  G S++FWA S L  FS  DS+ IDC+SVE TST++HPAAASW CDVD +G L+ V D++FFLVCGCGT+ATSG                                 + APT +P  + A    TPA S  PDT +E SGG+   AG      LTA+   AA  V+LA  V C A+V
Sbjct:   42 GRDARGTSLLLDTAEARSADFEHGYFPLDESKADLRGRRLEANR-PQADGSADADDA-------EGIFSPAV---MAAEGWGVVDLRGQCSDGDSFTVTSPSIPSTEGCYTSVPGTSFGEGFMYSTEDSTVTTTIYPKIITKDGTSNFFWAVSELAVFSG-DSVTIDCLSVETTSTYIHPAAASWQCDVDGSGELLPVEDDEFFLVCGCGTSATSGSSSDGADPVQTPTASPVSNPSSVDGDGDDSQDFSVAPTGSPTSMAAVVAPTPAGSSPPDTNTEVSGGNSRGAGSYAMQMLTAT---AAGVVSLATCV-CVAIV 344
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig840.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J9N6_9PHAE4.720e-5242.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig840contigP-littoralis_Contig840:13890..18837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig840.6.2mRNA_P-littoralis_Contig840.6.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig840 11699..19497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig840.6.2 ID=prot_P-littoralis_Contig840.6.2|Name=mRNA_P-littoralis_Contig840.6.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=422bp
MTPPPRPPPSASLPSSFSQPSTLPLKPAYSLAAATAGATATGAATAATAT
TATTTAPAREAAAAAAAATTTVTAREAAASAASAAAAMSTRRDTSGPEAE
PRPRALSQVEAEDTRGTRGGKDEAGATLLDNVNVRTGLWERQQATEALRI
PASDVGADADARAGAGAAEEGHFQAVMKKCLPEERGGLISLRGQCSGGDD
FTVSSGVVPSADGCYSAADGTDFGEGFFYTTDDADNKRSIYPKVITIGGE
SSYFWAASALVGFSNSDSIVIDCISVEPTSTHVHPAAASWSCDVDATGRL
VNVTDEQFFLVCGCGTTATSGSSSSSSSNNSSNNIAPSAGGAESSTTAPT
ATPGKVTATPASINPDTESEASGGSGLKAGPRGCSFLTASSGSAAAAVTL
AAGVLCAALVPDVVASLLFLL*
back to top