prot_P-littoralis_Contig84.62.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig84.62.1
Unique Nameprot_P-littoralis_Contig84.62.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length249
Homology
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: D7FVT6_ECTSI (S1-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT6_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 7.940e-85
Identity = 163/236 (69.07%), Postives = 168/236 (71.19%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSAGEAGKVRHRVEHILNKDQIKHLKKRHLWPADDAFGGTLFAAGQGSGTSRDGSGGAMAXXXXXXXXXXXXXXXXAS---------EVAECGAGKGRAXXXXXXXNGDXXXXRTEEKGTGGEXXXXXXXXXXXXXXMSDLFVNNNRVAMMQL 227
            MAGVGRRTLYRKSVTDDYLNSTPEPGENEEI LAQAPRGSNIIEIMLA GEP+LALLPTRFRKLIWVKRGDYLITSTSAG FETSAGE GKVRHRVEHILNKDQIKHLKKR LWPADDAFGG L AAG GS   RDG G A+A                A+         EVA   A   +         GD              XXXXXXXXXXXXXXMSDLFVNNNR AMM+L
Sbjct:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIVLAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKRELWPADDAFGGALLAAGAGSSGPRDGWGDAVADGGGSSDSGGSKGMGAAAIEEKGNXXXEVAATAATAEKEVGSGVKVGGDGAG-EVPSGXXXXXXXXXXXXXXXXXXXMSDLFVNNNRAAMMRL 235          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: A0A835YV91_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV91_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.260e-38
Identity = 76/163 (46.63%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSA-----------------------------------------------GEAGKVRHRVEHILNKDQIKHLKKRHLWPA 116
            MAGVGRRT YRKSV ++YL+  PEPGE   +A A   RGSN+IE+ L  GE +LA+LPTRFRKLIWVKRGDY++ STS G  ET                                                 GE GKVRHRVEH+L+KDQ+KH++K   WPA
Sbjct:    1 MAGVGRRTNYRKSVQEEYLSGLPEPGEGTAVAKALGSRGSNVIEVELQCGEQSLAMLPTRFRKLIWVKRGDYVLVSTSTGDIETHTAAAAAHARYAVQCNAPAYRPAQRGAHASKPALRRRRSYRAVRTSALDGEEGKVRHRVEHVLSKDQVKHIRKIGKWPA 163          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: A0A7S2UVE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVE6_9STRA)

HSP 1 Score: 130 bits (328), Expect = 8.460e-34
Identity = 64/120 (53.33%), Postives = 80/120 (66.67%), Query Frame = 0
Query:    2 AGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSAGEAGKVRHRVEHILN-KDQIKHLKKRHLWPADDAF 120
            AG GRRTLYRKSV + YLN TP P E E I      RGSNI+++    G  ALA+LPT+FRKLIWVKRGD+LI S S G   T++G +GKV+  V H+L+ +DQ  HL+    WP + A 
Sbjct:    1 AGSGRRTLYRKSVMESYLNDTPVPEEGERIVKVVESRGSNILQVQCPDGTKALAMLPTKFRKLIWVKRGDFLIVSESQGDVSTASGGSGKVKFMVSHVLHSRDQRAHLQSTGHWPGEFAL 120          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: A0A7S1GDQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDQ2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.000e-33
Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSAGEAGKVRHRVEHILNKDQIKHLKKRHLWPA---DDAFGGTLFAAG 128
            MAGV RR+ YRK+V    L+   EP E + I    A RGSN+++++   GE  L +LPTR+RKL+WVKRGD+LI   +   FET+ G+ G VR  V H+L KDQ+KHLKK   WPA   DD   G   A G
Sbjct:    1 MAGVKRRSKYRKNVEASVLDEMHEPEEGQIIVRVVASRGSNLLDVVTEAGEGGLCMLPTRYRKLVWVKRGDHLIVDCADDDFETAGGDKGAVRFSVAHVLYKDQVKHLKKIGKWPAAFDDDGAAGAGAAGG 131          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: A0A4D9CWY1_9STRA (S1-like domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWY1_9STRA)

HSP 1 Score: 129 bits (323), Expect = 6.910e-33
Identity = 65/126 (51.59%), Postives = 90/126 (71.43%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPG--ENEEIALAQAPRGSNIIEIMLA----TGEP----ALALLPTRFRKLIWVKRGDYLITSTSAGIFETSAGEAGKVRHRVEHILNKDQIKHLKKRHLWPA 116
            M+G GR++ YRKSVT++ L+S PEP     E +A     RG NI+++ +A    +GE     +LALLPT+FRKLIWVKRGD++I S ++  F+T+AGE GKV+  VEHIL K+Q+KHLK + +WPA
Sbjct:    1 MSGAGRKSAYRKSVTEEVLHSFPEPNVAAGERVARVVQSRGGNILQVNVAPDPKSGEDENGGSLALLPTKFRKLIWVKRGDFVIVSGTSHDFQTAAGEKGKVKFMVEHILYKEQVKHLKDQGMWPA 126          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: G4YPL5_PHYSP (S1-like domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YPL5_PHYSP)

HSP 1 Score: 127 bits (318), Expect = 1.070e-32
Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSA-GEAGKVRHRVEHILNKDQIKHLKKRHLWPA--DDAFGGTLFAAG 128
            M+G GR++ YRK VT   L   PEP ENE I    A RGSN+ E++ A G  ++ +LPT+FRKLIWVKRGD+LI     G   T+A G+ G V   VEHIL KDQIK+LK++ LWPA  DD+   T +  G
Sbjct:    1 MSGAGRKSAYRKGVTSRVLYGDPEPKENELIVRVTALRGSNLFEVVDAEGAKSVTMLPTKFRKLIWVKRGDFLIVGEGDGGEATTAKGKKGAVTSIVEHILYKDQIKNLKRKDLWPAAFDDSSASTAWTQG 131          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: A0A6G0X510_9STRA (S1-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X510_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.170e-32
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSAGEAGKVRHRVEHILNKDQIKHLKKRHLWP 115
            M+G GRR+ YRK VT D L   PEP + E I   Q+ RGSN++EI    G   LA+LPT++RKLIW++RGDYLI + + G         G V + VEHIL KDQIKHLKK++LWP
Sbjct:    1 MSGAGRRSGYRKGVTQDVLYGEPEPADGELIVRVQSMRGSNLLEIETPEGSTGLAMLPTKYRKLIWIRRGDYLIVAGATG------KSKGAVNYIVEHILYKDQIKHLKKKNLWP 109          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: A0A6A4G9K3_9STRA (S1-like domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G9K3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.590e-32
Identity = 68/129 (52.71%), Postives = 84/129 (65.12%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSA-GEAGKVRHRVEHILNKDQIKHLKKRHLWPA--DDAFGGTLFA 126
            M+G GR++ YRK VT   L   PEP ENE I    A RGSN+ E++ A G  A+ +LPT+FRKLIWVKRGD+LI     G   T+A G+ G V   VEHIL KDQIK+LK++ LWPA  DD    T +A
Sbjct:    1 MSGAGRKSAYRKGVTSRVLYGDPEPKENELIVRVTALRGSNLFEVVDAEGTKAVTMLPTKFRKLIWVKRGDFLIVGEGDGGEATTAKGKKGAVTSIVEHILYKDQIKNLKRKELWPAAFDDPSVSTAWA 129          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: A0A812LGH3_9DINO (Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LGH3_9DINO)

HSP 1 Score: 125 bits (314), Expect = 4.110e-32
Identity = 61/116 (52.59%), Postives = 77/116 (66.38%), Query Frame = 0
Query:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSAGEAGKVRHRVEHILNKDQIKHLKKRHLWPA 116
            MAGV RRT YRK V  D L++   P + +EI       GSNI+E+  A GE A  +LPT++RKLIWVKRGD+LI S  A  ++T++G  G V++ VEHIL    IKHLKK  LWPA
Sbjct:    1 MAGVKRRTKYRKQVEADVLDAFHTPEDGQEIVQIVQSHGSNILEVRDAEGENAKCILPTKYRKLIWVKRGDFLIVSKGAEDYDTASGNKGTVKYMVEHILTASSIKHLKKEGLWPA 116          
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Match: A0A196SLW6_BLAHN (RNA-binding protein EIF1AD n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SLW6_BLAHN)

HSP 1 Score: 124 bits (310), Expect = 8.510e-32
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    6 RRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATGEPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSAGEAGKVRHRVEHILNKDQIKHLKKRHLWPAD 117
            R+T YRK VT   L+  P P ENE +A    PRG N+ E+ L  G+  LA+LPT+F KLIW+KRGDY+I + S G F TS+G+   V   ++HIL KDQ+ H+KK  LWP +
Sbjct:    6 RKTSYRKGVTSTTLDEYPVPKENEILARISNPRGGNVFEVELPDGQKVLAILPTKFNKLIWMKRGDYVIVTKSEGQFTTSSGKQNGVESMIQHILLKDQVNHIKKEGLWPKE 117          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.62.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT6_ECTSI7.940e-8569.07S1-like domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YV91_9STRA5.260e-3846.63S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2UVE6_9STRA8.460e-3453.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1GDQ2_9STRA2.000e-3348.85Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A4D9CWY1_9STRA6.910e-3351.59S1-like domain-containing protein n=3 Tax=Monodops... [more]
G4YPL5_PHYSP1.070e-3251.15S1-like domain-containing protein n=1 Tax=Phytopht... [more]
A0A6G0X510_9STRA1.170e-3253.04S1-like domain-containing protein n=1 Tax=Aphanomy... [more]
A0A6A4G9K3_9STRA1.590e-3252.71S1-like domain-containing protein n=1 Tax=Phytopht... [more]
A0A812LGH3_9DINO4.110e-3252.59Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A196SLW6_BLAHN8.510e-3250.00RNA-binding protein EIF1AD n=1 Tax=Blastocystis sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001253Translation initiation factor 1A (eIF-1A)SMARTSM00652eIF1neu4coord: 24..115
e-value: 3.5E-10
score: 49.8
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 2..138
e-value: 3.7E-20
score: 73.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 11..116
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 29..79
e-value: 3.6E-9
score: 36.3
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 5..97
score: 8.858947
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..248
IPR039294Probable RNA-binding protein EIF1ADPANTHERPTHR21641TRANSLATION INITIATION FACTOR-RELATEDcoord: 10..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig84contigP-littoralis_Contig84:398432..401581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig84.62.1mRNA_P-littoralis_Contig84.62.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig84 397143..403016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig84.62.1 ID=prot_P-littoralis_Contig84.62.1|Name=mRNA_P-littoralis_Contig84.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=249bp
MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIALAQAPRGSNIIEIMLATG
EPALALLPTRFRKLIWVKRGDYLITSTSAGIFETSAGEAGKVRHRVEHIL
NKDQIKHLKKRHLWPADDAFGGTLFAAGQGSGTSRDGSGGAMAGEGGGGS
TDSRGGDAAASEVAECGAGKGRAAGAEEVVNGDAGGGRTEEKGTGGEEQE
EEEEEEEEEDDMSDLFVNNNRVAMMQLRTDQEDDEEDSDSDSDSESEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001253TIF_eIF-1A
IPR012340NA-bd_OB-fold
IPR006196RNA-binding_domain_S1_IF1
IPR039294EIF1AD