prot_P-littoralis_Contig84.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig84.42.1
Unique Nameprot_P-littoralis_Contig84.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length233
Homology
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: D7FVT2_ECTSI (RNase_PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT2_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 3.010e-120
Identity = 189/227 (83.26%), Postives = 208/227 (91.63%), Query Frame = 0
Query:    6 TRRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQKVKREAETLR 232
            TRRDGR ANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKS+RMER++GAT+DV+FK E+G  + + AE E LLRRSLEEVVLRSRYPR VVSV+IQVIVDDGAVLSAALNAATMALLNAGVEMTG+A+SVTC IT  + GRSVLLDPCK+EE +AAATA +ATLSA GG+LSCHAVG MS+EEYFACCEAA+LGTTAVRSFVRLS EQKV REAET+R
Sbjct:    4 TRRDGRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSLRMERSEGATLDVSFKPESGITSSADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITATVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCHAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETVR 230          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A835ZF16_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA)

HSP 1 Score: 183 bits (465), Expect = 2.470e-54
Identity = 112/238 (47.06%), Postives = 151/238 (63.45%), Query Frame = 0
Query:    7 RRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDA-------------IGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQKVKREAETL 231
            R DGRT +QIR L A+QGILNRADGS RF  GNTSVL AVYGPA     + E+ D A ++V+++++ G  T + AERE+ +RR+LEE V  +RYPR+V+SVV+QV+ DDG+VLSAA+NA  MAL++AGVEM G+ ++ T   + +             +G   + LDP  SEEA   AT  +A L+ S GIL+    G +  EE FA  EAA     AV  ++R + E KV R+   L
Sbjct:    6 RFDGRTGDQIRGLFADQGILNRADGSVRFGAGNTSVLVAVYGPAQPAQQKKEKPDRAIIEVSWRADKGAQTSADAERELYVRRTLEEAVAVARYPRSVISVVVQVLCDDGSVLSAAINACAMALVDAGVEMIGMPVAATACFSGSGSAAAAAPEQLQHLGESHLQLDPSASEEATTRATVMLAVLAGSDGILTMKMTGQLGAEELFAASEAARKACDAVSVYLRRAVEAKVLRDVANL 243          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A067CJ13_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ13_SAPPC)

HSP 1 Score: 181 bits (460), Expect = 7.670e-54
Identity = 105/217 (48.39%), Postives = 142/217 (65.44%), Query Frame = 0
Query:    7 RRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQK 223
            R DGR   +IRPLA EQG+LNRADGSARF  G TSVLA+V GPA AK  R E+A GAT++V FK+E G  +    E E++LR + E +++   +PRAVVS+ +QV+ DDGA+L+ A+NA  +AL++AGV M  I  ++TCSI +      + LDP +SE   AAAT   A    + GIL+    G++S E+YFAC E       +V +FVR+S E K
Sbjct:    7 REDGRLVQEIRPLACEQGLLNRADGSARFNHGTTSVLASVSGPAAAKLRRQEKATGATLEVTFKAEKGAPSARDKEYEMILRETFEPIIVLENFPRAVVSITVQVVEDDGALLAVAINAVNLALIDAGVPMRSIVGAITCSILE---DGQLCLDPSRSEGETAAATVTTACCGNNDGILTSMTSGVLSEEQYFACSEICRRAIDSVLAFVRISQESK 220          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A485KL27_9STRA (Aste57867_8748 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL27_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.090e-51
Identity = 106/230 (46.09%), Postives = 144/230 (62.61%), Query Frame = 0
Query:    1 MVLGTTRR-DGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQKVKREAE 229
            M  G  RR DGR   +IRPL+ EQG+LNRADGSARF  G TSVLA+V GPA AK  R E+ D AT++V FK+E G  T    E E +LR++ E +V    YPRAV+S+ +QV+ DDG++L+ A+NA  +ALL+AG+ M  +  ++TCSI +      + LDP + E   AAAT   A    + GIL+    G++S  +YFAC E       +V SFVR+S E K ++  E
Sbjct:    1 MANGDERRGDGRLVQEIRPLSCEQGLLNRADGSARFSHGTTSVLASVNGPAAAKIRRQEKVDEATLEVVFKAEKGAPTARDKEYEAILRQTFEPIVYLENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMRCLVGAITCSILE---DGQLCLDPARVEGETAAATVTSACAGNNDGILTSLTTGMLSESQYFACSEICRRAVDSVLSFVRISQETKFQKALE 227          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A1V9ZII6_9STRA (Exosome component Rrp46 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZII6_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.900e-51
Identity = 102/220 (46.36%), Postives = 143/220 (65.00%), Query Frame = 0
Query:    7 RRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQKVKR 226
            R DGR   +IRPLA EQG+LNRADGS+RF  G TSVLA+V GPA AK  R E+   AT++V FK E G  +    E E++LR++ E ++L   +PRAV+SV +QV+ DDGA+L+ A+NA  +ALL+AGV M GI  ++TC+I +      + LDP  SE   AAAT   A+   S G+L+    G+++  +YFAC E    G  +V +FVR++ E K ++
Sbjct:    8 REDGRLVQEIRPLACEQGLLNRADGSSRFNHGTTSVLASVSGPAAAKLRRQEKMHCATLEVVFKPEKGAASARDKEYEMILRQTFEPIILLENFPRAVISVTVQVVEDDGALLAVAINAVNLALLDAGVPMRGIVGAITCTILE---DGQLCLDPSLSEGEAAAATVTTASCGNSDGVLTSMTSGVLTEAQYFACSEICRRGIDSVLAFVRIAQETKFQK 224          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A024TBK6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TBK6_9STRA)

HSP 1 Score: 169 bits (427), Expect = 8.410e-49
Identity = 99/222 (44.59%), Postives = 140/222 (63.06%), Query Frame = 0
Query:    7 RRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQKVKREA 228
            R DGR   +IRPL+ EQG+LNRADGSARF  G+TSVLA+V GPA AK  R E+ D ATV+V FKS+ G  T    E E +L+++ + +V    YPRAV+S+ +QV+ DDG++L+ A+NA  +ALL+AG+ M  +  ++TCSI D      + LDP  +E   A A+   A    + GIL+    GL++  +YFA  E       +V SFVR++ E K ++ A
Sbjct:   10 RDDGRLVQEIRPLSCEQGLLNRADGSARFCHGSTSVLASVNGPAAAKIRRHEKVDAATVEVVFKSDKGAPTARDKEYEAILKQTFDPIVYVENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMRSLVGAITCSILD---DGQLCLDPSLTEGDAATASVTAAYAGKNDGILTSITTGLVNESQYFAASEICRRAIDSVLSFVRIAQESKFQKNA 228          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A833WKX0_PHYIN (3' exoribonuclease family domain 2 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WKX0_PHYIN)

HSP 1 Score: 166 bits (421), Expect = 1.270e-47
Identity = 98/225 (43.56%), Postives = 143/225 (63.56%), Query Frame = 0
Query:    7 RRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAV--------LSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQK 223
            R+DGR  N++RP A+EQG L RADGSAR   G+++VLAAVYGP  A++ R E  D AT+DV FK E G +T    E E ++R++   VVL   +PRAV+S+V+QVI D+G++         + A+NA ++AL++AGV M  +  + +CSI D     ++ LDP  +EE EA +    A  S S G+L+C   GL+S E+YFAC EA    + +V +F R+  ++K
Sbjct:   22 RQDGRAGNELRPFASEQGALFRADGSARMSHGSSTVLAAVYGPGQARNWRAENTDKATLDVCFKLEKGIMTSKEKEYEQIIRQTFAPVVLTDSFPRAVISIVVQVIEDNGSISFPLFLIIAALAINAVSLALMDAGVPMLSVVTATSCSIFD---DGNLYLDPTAAEEEEAVSWVTTARSSTSDGVLTCITNGLLSEEQYFACSEACQRASESVAAFFRIVQQKK 243          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A6G0WBP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBP6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.180e-46
Identity = 98/221 (44.34%), Postives = 134/221 (60.63%), Query Frame = 0
Query:    5 TTRRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQKVK 225
            T R DGR   +IRPL+ EQ +LNRADGSARF  G +SVLA+V GPA AK  R E+   A+++V FK+E G  T    E E +LR++ E ++    +PRAV+SV +QV+ DDG++LS A+NA  +ALL+AG+ M  +  +VTCSI D        LD   +E   A A+   A    + GIL+    G++S   YFAC E       +V SFVR+S E K +
Sbjct:    7 TRREDGRLVQEIRPLSCEQSLLNRADGSARFSHGTSSVLASVNGPAAAKIRRQEKVSCASLEVTFKAEKGAPTARDKEYEAILRQTFEPIIYLENFPRAVISVTVQVVEDDGSLLSVAINAMNLALLDAGIPMRCLVGAVTCSILD---DGQFCLDSSLTEGEAAVASVTSACAGNNDGILTSLTTGVLSESHYFACSEICRRAVGSVLSFVRISQETKFR 224          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A1V9ZVY3_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVY3_9STRA)

HSP 1 Score: 169 bits (427), Expect = 7.570e-45
Identity = 94/217 (43.32%), Postives = 139/217 (64.06%), Query Frame = 0
Query:    7 RRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQK 223
            R DGR+  +IRPLA EQG+LNRADGSARF  G TSV+A+V GPAPAK  R E  + AT+DV FK+E G  T    E E++LR++ E ++L   +PR V+S+ +QV+ DDG++L+ ++NA  +AL++AG+ M  +  ++TCS+ +      + +DP   E   A AT   A  + +  IL+    G+++ E+YFAC E       +V +FVR+S E K
Sbjct:  504 REDGRSVQEIRPLACEQGLLNRADGSARFNHGTTSVMASVSGPAPAKIRRQENVNQATLDVVFKAEKGVATARDKEYELILRQTFEPIILLENFPRTVISITVQVVEDDGSLLAVSINAINLALMDAGIPMRSVVGAITCSVLE---DSQLCIDPSLVENDTATATVTTACSANNHQILTSFTSGILTEEQYFACSEICRRAIDSVIAFVRISQESK 717          
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Match: A0A5D6XHQ5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHQ5_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.900e-44
Identity = 94/226 (41.59%), Postives = 138/226 (61.06%), Query Frame = 0
Query:    3 LGTTRRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRYPRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITDAIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFACCEAAALGTTAVRSFVRLSTEQKVKREA 228
            + T R DGR  N++RPLA+EQG L RADGSAR   G+++VL AVYGP  AKS R E+   A +DV FK E G +T    E E ++R++ E VV+   +PRAV+S+V+Q +      LS A+NA ++ALL+AGV MT +  S TC +   +   ++ LDP ++EE  + +    A  S S  +L+    GL++ E+YFAC EA      +V +F R+  ++K +  A
Sbjct:    1 MATKRHDGRAGNELRPLASEQGALFRADGSARVAHGSSAVLVAVYGPGQAKSRRSEKLHRAALDVCFKLEKGVLTSKEKEYEQVIRQTFEPVVVTENFPRAVISIVVQHL------LSVAINAVSLALLDAGVPMTSVVTSATCGL---LPDGTLFLDPSQAEEELSTSLVTTACSSTSDSVLTSLTNGLLTEEQYFACSEACRRAAESVHAFFRIVQQKKYEANA 217          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT2_ECTSI3.010e-12083.26RNase_PH domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZF16_9STRA2.470e-5447.06Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A067CJ13_SAPPC7.670e-5448.39Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485KL27_9STRA1.090e-5146.09Aste57867_8748 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1V9ZII6_9STRA2.900e-5146.36Exosome component Rrp46 n=1 Tax=Achlya hypogyna Ta... [more]
A0A024TBK6_9STRA8.410e-4944.59Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A833WKX0_PHYIN1.270e-4743.563' exoribonuclease family domain 2 n=1 Tax=Phytoph... [more]
A0A6G0WBP6_9STRA4.180e-4644.34Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9ZVY3_9STRA7.570e-4543.32U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax... [more]
A0A5D6XHQ5_9STRA2.900e-4441.59Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 15..136
e-value: 9.8E-24
score: 84.4
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 4..230
e-value: 2.7E-54
score: 186.1
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 6..224
NoneNo IPR availablePANTHERPTHR11953:SF1EXOSOME COMPLEX COMPONENT RRP46coord: 6..224
NoneNo IPR availableCDDcd11372RNase_PH_RRP46coord: 16..217
e-value: 2.65429E-59
score: 183.92
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 137..226
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 6..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig84contigP-littoralis_Contig84:294140..295377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig84.42.1mRNA_P-littoralis_Contig84.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig84 293169..295580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig84.42.1 ID=prot_P-littoralis_Contig84.42.1|Name=mRNA_P-littoralis_Contig84.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp
MVLGTTRRDGRTANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPA
PAKSVRMERADGATVDVNFKSENGTITPSHAEREVLLRRSLEEVVLRSRY
PRAVVSVVIQVIVDDGAVLSAALNAATMALLNAGVEMTGIAISVTCSITD
AIGGRSVLLDPCKSEEAEAAATAAIATLSASGGILSCHAVGLMSREEYFA
CCEAAALGTTAVRSFVRLSTEQKVKREAETLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001247ExoRNase_PH_dom1
IPR027408PNPase/RNase_PH_dom_sf
IPR036345ExoRNase_PH_dom2_sf
IPR020568Ribosomal_S5_D2-typ_fold