prot_P-littoralis_Contig816.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig816.11.1
Unique Nameprot_P-littoralis_Contig816.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length196
Homology
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 8.990e-134
Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGCC 195
            MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEAR Y+EDNGLIHMETSAKSAQNVK+IFVEIAQKLPKATVQPEREAFP+MRPRTEQKSGCC
Sbjct:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 195          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: A0A835Z7I1_9STRA (Rab5, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I1_9STRA)

HSP 1 Score: 329 bits (843), Expect = 4.680e-113
Identity = 164/191 (85.86%), Postives = 178/191 (93.19%), Query Frame = 0
Query:    5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGCC 195
            RVCHFKLVLLGDTAVGKSCLVVRFVR+EFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK+SFNGAKSWVKELQRRGDPNV+IALAGNKADLE RRQV  EEA  Y+E+NG+IHMETSAKSA NVK+IFVEIA++LPKA  QPEREAFP+M PR ++K+G C
Sbjct:    3 RVCHFKLVLLGDTAVGKSCLVVRFVRNEFFEFQEPTIGAAFLTQTVGLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFNGAKSWVKELQRRGDPNVVIALAGNKADLEGRRQVHFEEAHAYAEENGIIHMETSAKSALNVKSIFVEIAKRLPKAGAQPEREAFPIMPPRRDKKAGGC 193          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: F0YJN1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJN1_AURAN)

HSP 1 Score: 327 bits (839), Expect = 1.970e-112
Identity = 158/195 (81.03%), Postives = 182/195 (93.33%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGCC 195
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L++ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TNKESFNGAKSWVKELQRRGDPNVIIALAGNKADL+++R+V+SEEA+QYSE+NG++HMETSAK+A +VK++F EIA+KLPK   QPER+AFP++ P+  +   CC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLPKTPPQPERDAFPIIPPKHNENKVCC 195          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: A0A6V1MPB5_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1MPB5_HETAK)

HSP 1 Score: 320 bits (819), Expect = 2.120e-109
Identity = 161/195 (82.56%), Postives = 174/195 (89.23%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGCC 195
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQ V L +ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK+SFNGAKSWVKELQRRGDPNV+IALAGNK DLE RRQV  EEA  Y+ +NG+IHMETSAKSA NV+ IF++IA+KLPK   Q ERE FP+M P+ E K GCC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQTVSLPEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFNGAKSWVKELQRRGDPNVVIALAGNKCDLEPRRQVPFEEAAAYAAENGIIHMETSAKSAHNVQQIFLDIAKKLPKNPPQVEREVFPIMPPKRESK-GCC 194          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: A0A7S2RYM3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYM3_9STRA)

HSP 1 Score: 315 bits (807), Expect = 1.530e-107
Identity = 153/196 (78.06%), Postives = 179/196 (91.33%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQ-KSGCC 195
            M++ RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TNK+SFNGA+SWVKELQ+RGDPNV+IALAGNK+DLEH+R+V++EEA  Y+ +NG++HMETSAKSA NVK++FVEIA+KLPK   +  REAFP++ P+T Q +  CC
Sbjct:    1 MAANRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNKDSFNGARSWVKELQKRGDPNVVIALAGNKSDLEHKRKVETEEAEAYALENGILHMETSAKSATNVKSLFVEIARKLPKNPPETPREAFPIIPPKTSQSRRQCC 196          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: A0A7S1ZIQ9_TRICV (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZIQ9_TRICV)

HSP 1 Score: 316 bits (809), Expect = 3.040e-107
Identity = 154/192 (80.21%), Postives = 174/192 (90.62%), Query Frame = 0
Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGC 194
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LD+ATVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA  Y+E+NG++H+ETSAK+A NVK +FVEIA+KLPK   QPEREAFP++ P+ E +S C
Sbjct:   45 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFAGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYAEENGILHLETSAKNASNVKALFVEIAKKLPKTPPQPEREAFPIVTPKQENRSCC 236          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: T0Q598_SAPDV (Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q598_SAPDV)

HSP 1 Score: 313 bits (803), Expect = 6.230e-107
Identity = 158/196 (80.61%), Postives = 174/196 (88.78%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGCC 195
            M+S + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK+SF GAKSWVKELQRRGDPNVIIALAGNKADLE RR+V  EEARQY+E+N ++HMETSAK+A NVK++FV IAQKLPK   QPER+AFP+      +K+GCC
Sbjct:    1 MASNKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVIIALAGNKADLEARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQKLPKNPQQPERDAFPITPVTPPKKNGCC 196          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: A0A6U2XTP3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2XTP3_9STRA)

HSP 1 Score: 313 bits (803), Expect = 7.170e-107
Identity = 153/193 (79.27%), Postives = 177/193 (91.71%), Query Frame = 0
Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGCC 195
            + R+ HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ VQLD++TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TN +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA  Y+ +NGL+H+ETSAK+A NVK++FVEIA+KLPK   +PEREAFP++ P+T++KS CC
Sbjct:    9 NSRIHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYATENGLLHLETSAKNANNVKSLFVEIAKKLPKQEPEPEREAFPIL-PQTQEKSNCC 200          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: A0A5D6XMY9_9STRA (Uncharacterized protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A5D6XMY9_9STRA)

HSP 1 Score: 313 bits (802), Expect = 9.490e-107
Identity = 158/198 (79.80%), Postives = 176/198 (88.89%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQ--KSGCC 195
            M+ G+ CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK+SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA QY+EDN ++HMETSAK+A NVK++FV IA++LPK   QPEREAFP+  P  ++  KSGCC
Sbjct:    1 MAQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLDDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPHQPEREAFPITPPTNQKQNKSGCC 198          
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Match: B8BUG2_THAPS (Canine-like rab-type small G protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BUG2_THAPS)

HSP 1 Score: 312 bits (800), Expect = 1.610e-106
Identity = 154/193 (79.79%), Postives = 174/193 (90.16%), Query Frame = 0
Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGCC 195
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TN +SF GAKSWVKELQRRGD +V+IA+AGNKADLE RRQV  EEA  Y+E+NG++HMETSAK+A NVK +FVEIA++LPK+T QP+REAFP+M P+ ++   CC
Sbjct:    2 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNPDSFAGAKSWVKELQRRGDQDVVIAMAGNKADLEARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLPKSTQQPDREAFPIM-PQKQESRNCC 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig816.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC7_ECTSI8.990e-13497.95Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7I1_9STRA4.680e-11385.86Rab5, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
F0YJN1_AURAN1.970e-11281.03Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6V1MPB5_HETAK2.120e-10982.56Hypothetical protein n=2 Tax=Chattonellaceae TaxID... [more]
A0A7S2RYM3_9STRA1.530e-10778.06Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S1ZIQ9_TRICV3.040e-10780.21Hypothetical protein n=3 Tax=Mediophyceae TaxID=58... [more]
T0Q598_SAPDV6.230e-10780.61Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae Ta... [more]
A0A6U2XTP3_9STRA7.170e-10779.27Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A5D6XMY9_9STRA9.490e-10779.80Uncharacterized protein n=23 Tax=Oomycota TaxID=47... [more]
B8BUG2_THAPS1.610e-10679.79Canine-like rab-type small G protein n=2 Tax=Thala... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 9..30
score: 50.96
coord: 32..48
score: 32.53
coord: 147..169
score: 37.47
coord: 112..125
score: 51.08
coord: 50..72
score: 50.66
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..172
e-value: 4.3E-32
score: 122.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..172
e-value: 2.8E-88
score: 309.3
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 14..195
e-value: 8.9E-6
score: 32.6
NoneNo IPR availablePIRSRPIRSR006809-1PIRSR006809-1coord: 84..168
e-value: 0.028
score: 11.1
coord: 12..34
e-value: 110.0
score: -0.6
NoneNo IPR availablePIRSRPIRSR006809-2PIRSR006809-2coord: 12..34
e-value: 110.0
score: -0.6
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 3..178
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 3..178
NoneNo IPR availablePROSITEPS51420RHOcoord: 2..172
score: 9.270208
NoneNo IPR availablePROSITEPS51419RABcoord: 3..195
score: 33.210777
NoneNo IPR availableCDDcd01860Rab5_relatedcoord: 8..170
e-value: 8.17545E-116
score: 324.12
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 11..171
e-value: 1.1E-12
score: 42.4
IPR001806Small GTPasePFAMPF00071Rascoord: 10..169
e-value: 1.4E-60
score: 203.6
IPR001806Small GTPasePROSITEPS51421RAScoord: 2..195
score: 18.134495
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 9..163
e-value: 1.0E-30
score: 104.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..195
e-value: 1.3E-65
score: 222.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig816contigP-littoralis_Contig816:46515..56422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig816.11.1mRNA_P-littoralis_Contig816.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig816 45262..58110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig816.11.1 ID=prot_P-littoralis_Contig816.11.1|Name=mRNA_P-littoralis_Contig816.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp
MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKV
QLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAK
SWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYSEDNGLIHMET
SAKSAQNVKNIFVEIAQKLPKATVQPEREAFPVMRPRTEQKSGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase