prot_P-littoralis_Contig805.10.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig805.10.2
Unique Nameprot_P-littoralis_Contig805.10.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length522
Homology
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: A0A6H5KM69_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KM69_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 4.360e-145
Identity = 313/577 (54.25%), Postives = 342/577 (59.27%), Query Frame = 0
Query:    6 STVGSGFELSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKIISDNLSRPVQAAGGG----GRDICSAKSQSHS-RGEGGGETDQSD--------DDEPQCRGKLG-NHRERLHRRYRQ--SRAGELNSRGKGRLAGASPASLSSLQAPKREVLRIYRGDKTTVWCESRLSVRNEKNDDSNSGAPPVPLEIILTLRTVAEGRKTEVAYEFAGGQASVANHTSRTPVSVAAGRAGA---------------------------VDEDADEEYVEADDDGYQCEVEAEEDSTSGGWNDVGTKRKVSCATGVNGSSKGARSSRKRQVEVRGTSNTA--------AADPMVGREERSLSQKRQRASISKSMEE----IGASGNADKSGGDNSSTGGDTGGCTTHEGSGSFEGXXXXXXXXXXXXXXXXXXXXSSKWGDGDGCGGVAAAVGRSSYRSCDGGSDDGDGASAG-----TSAADTDFGDDVQTAVQSLILMGGDF-NKAAH 521
            S VGSGFELSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPED+TGANIFELVAPECH +LRKIISDNLSRPV++ GGG    GR    + S + S +GEG                D EPQCR K G NHRER  +R RQ  S+ GE    G G   G +P S S    PK ++LR++RGDKTTVWCE RLSVRN K+ D  S A PVPLEI+LTLRTVAEG KT VA EFAGGQ S+A      P S +AG+A A                                                                        G +G+S       K++ E  GT   A        AADP VGREERSLS+KRQR S+S  M+E          ADK G DNSSTGGDTGG TTHEGS S                       SSKWGDGDG GGV A  GR SYR C   S+DGD    G     TSA  T+FGDDVQ AVQSLILMGGD+ NKAA 
Sbjct:   10 SVVGSGFELSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNLSRPVKSIGGGAAAAGRRAAGSWSSAKSLQGEGSXXXXXXXXXXXXXXGDGEPQCREKKGGNHRERPQQRCRQPQSQPGECGGIGNGGRGGGAPTSSSLQGPPKMKMLRVFRGDKTTVWCEGRLSVRNAKSHDGYSTAAPVPLEIVLTLRTVAEGGKTAVAREFAGGQLSMATG----PSSASAGKACAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPRGFSGASV------KQEPEATGTPKMAGAAXXXXEAADPAVGREERSLSKKRQRVSLSNRMDEELSGXXXXXXADKCGEDNSSTGGDTGGFTTHEGSVSCSNEADSTGEGWNNEG-------SSKWGDGDGGGGVNAPEGRDSYRDCGNSSEDGDRDVDGVSEESTSAGRTEFGDDVQNAVQSLILMGGDYSNKAAQ 569          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: A0A835Z3F0_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F0_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.620e-25
Identity = 59/108 (54.63%), Postives = 85/108 (78.70%), Query Frame = 0
Query:   20 EHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKIISDNLS 127
            + RR +EK+ +KRAANRKSAS SRARKK +V++MT +NERM+++A +L++LPDL++A+ R G ++YVS AC+ LL  S ED+ G ++F LV P+CH  LR +I+D LS
Sbjct:   35 DRRRMEEKKLLKRAANRKSASASRARKKTFVEEMTIENERMRRNAQILALLPDLIVALSRAGAVSYVSGACETLLQRSTEDMRGTSLFALVTPDCHDTLRALIADTLS 142          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: A0A835Z9B4_9STRA (BZIP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 5.540e-23
Identity = 47/93 (50.54%), Postives = 73/93 (78.49%), Query Frame = 0
Query:   30 VKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKII 122
            +KRAANRKSAS SRARKK +V++M+ +N+RM+++A +L++LPDL++A+CR G ++YVS AC+  L    E++ G ++F+LV PECH  L  ++
Sbjct:    1 LKRAANRKSASASRARKKTFVEEMSIENDRMRRNAQILALLPDLIVALCRRGTVSYVSGACEAFLQKRSEEMRGMSMFDLVTPECHGALSLLL 93          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: A0A7S4VJ34_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VJ34_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.410e-17
Identity = 48/108 (44.44%), Postives = 75/108 (69.44%), Query Frame = 0
Query:   17 IIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKIISD 124
            ++ E RR++EKR  KR ANRKSA TSRARKKA V++MT  N R+++ AL+L++LPDLV+A+   G +T+ S   + +L H  ED+ G+N+ +++ P     LR ++ +
Sbjct:   41 LLAEARRREEKRTAKRVANRKSACTSRARKKALVEEMTRTNARLRRQALILALLPDLVIAITIDGTITFCSAQVERVLRHKEEDLVGSNLNDVLMPLSRGALRHLVKE 148          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: A0A7S4W8D6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W8D6_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 8.840e-17
Identity = 48/105 (45.71%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   20 EHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKIISD 124
            E RR++EKR  KR ANRKSA TSRARKKA V++MT  N R+++ AL+L++LPDLV+A+   G +T+ S   + +L H  ED+ G+N+ +++ P     LR ++ +
Sbjct:    1 EARRREEKRTAKRVANRKSACTSRARKKALVEEMTRTNARLRRQALILALLPDLVIAITIDGTITFCSAQVERVLRHKEEDLVGSNLNDVLMPLSRGALRHLVKE 105          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: A0A7S2UHM5_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHM5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.130e-16
Identity = 46/108 (42.59%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   17 IIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKIISD 124
            ++ + R+++EKR  KR ANRKSA TSRARKKA V++MT  N R+++ A++LS+LPD+V+A+   GE+T+ S   + +L H   D+ GA + +++ P     L ++ SD
Sbjct:  399 LLADARKKEEKRTAKRVANRKSACTSRARKKALVEEMTKTNARLRRQAMILSLLPDMVVAITEDGEITFCSAQVERILRHPVTDLVGAKLTDILVPSSREALDRLTSD 506          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: A0A7S2V9B7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9B7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.220e-16
Identity = 48/109 (44.04%), Postives = 75/109 (68.81%), Query Frame = 0
Query:   14 LSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKII 122
            +S ++ + +R+ +KR  KR ANRKSASTSRARKKAYV +MT  N R+K+ AL+LS+LPD+V+A+  +G++T+ S   + +L     ++ GAN+  L+ P     L ++I
Sbjct:  244 VSLLLADAKRKADKRNAKRIANRKSASTSRARKKAYVQEMTELNARLKRQALILSLLPDMVIAIGESGDITFCSAQVERVLRFDSAELVGANLSNLLVPSSKEKLNRLI 352          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: D7FNF3_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNF3_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 2.290e-16
Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = 0
Query:   30 VKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKIISDNL 126
             KRAANR+SA+T R RKK +V++M   NERM++ A VLS+LPD++LA+ R G +TY S  C+  L  + +++ G NIF+LV    H+ LR+++ +NL
Sbjct:   53 AKRAANRRSANTCRLRKKFFVENMADANERMRKRARVLSLLPDMILAMRRDGVITYASENCRQFLQFTRQEVEGTNIFDLVESGSHNRLRRLLEENL 149          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: K0SE11_THAOC (PAS domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SE11_THAOC)

HSP 1 Score: 92.8 bits (229), Expect = 4.240e-16
Identity = 47/120 (39.17%), Postives = 80/120 (66.67%), Query Frame = 0
Query:   17 IIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKIISDNLSRPVQAAGGG 136
            ++ + RR+ +KR  KR ANR+SA+TSR RKK  +++MT  N R+++HAL+LS LPD V+++   G++T+ +   + +L H  ED+ GANI +++ P    ++R++I D +    +A G G
Sbjct:  338 LLADARRKADKREAKRLANRRSAATSRNRKKMLIEEMTRDNARLRRHALILSYLPDPVVSISLEGDITFCNMQLERVLKHPIEDLIGANIEDIMVPSSRKIVRRLIRDLVIAEQRALGNG 457          
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Match: A0A6H5KPQ7_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ7_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.360e-15
Identity = 45/97 (46.39%), Postives = 68/97 (70.10%), Query Frame = 0
Query:   30 VKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDITGANIFELVAPECHSVLRKIISDNL 126
             KRAANR+SA+T R RKK +V++M   NERM++ A VLS+LPD++LA+ R G +TY S  C+  L  + +++ G NIF+LV    H+ L +++ +NL
Sbjct:   69 AKRAANRRSANTCRLRKKFFVENMADANERMRKRARVLSLLPDMILAMRRDGVITYASENCRQFLQFTRQEVEGTNIFDLVESGSHNRLWRLLEENL 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig805.10.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5KM69_9PHAE4.360e-14554.25PAS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z3F0_9STRA1.620e-2554.63PAS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z9B4_9STRA5.540e-2350.54BZIP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S4VJ34_9STRA4.410e-1744.44Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A7S4W8D6_9STRA8.840e-1745.71Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2UHM5_9STRA1.130e-1642.59Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S2V9B7_9STRA2.220e-1644.04Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
D7FNF3_ECTSI2.290e-1647.42PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
K0SE11_THAOC4.240e-1639.17PAS domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A6H5KPQ7_9PHAE2.360e-1546.39PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 57..252
e-value: 4.0E-10
score: 41.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..455
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..43
NoneNo IPR availableCDDcd14686bZIPcoord: 28..63
e-value: 2.46558E-5
score: 39.8361
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 31..45
IPR000014PAS domainPROSITEPS50112PAScoord: 59..129
score: 11.197898
IPR000014PAS domainCDDcd00130PAScoord: 70..128
e-value: 2.4553E-6
score: 44.1611
IPR046347Basic-leucine zipper domain superfamilySUPERFAMILY57959Leucine zipper domaincoord: 27..64
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 58..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig805contigP-littoralis_Contig805:30683..34028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig805.10.2mRNA_P-littoralis_Contig805.10.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig805 30627..34873 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig805.10.2 ID=prot_P-littoralis_Contig805.10.2|Name=mRNA_P-littoralis_Contig805.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=522bp
MDSTDSTVGSGFELSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYV
DDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPED
ITGANIFELVAPECHSVLRKIISDNLSRPVQAAGGGGRDICSAKSQSHSR
GEGGGETDQSDDDEPQCRGKLGNHRERLHRRYRQSRAGELNSRGKGRLAG
ASPASLSSLQAPKREVLRIYRGDKTTVWCESRLSVRNEKNDDSNSGAPPV
PLEIILTLRTVAEGRKTEVAYEFAGGQASVANHTSRTPVSVAAGRAGAVD
EDADEEYVEADDDGYQCEVEAEEDSTSGGWNDVGTKRKVSCATGVNGSSK
GARSSRKRQVEVRGTSNTAAADPMVGREERSLSQKRQRASISKSMEEIGA
SGNADKSGGDNSSTGGDTGGCTTHEGSGSFEGSGSCNEADSNGEGEDSMN
GSSSKWGDGDGCGGVAAAVGRSSYRSCDGGSDDGDGASAGTSAADTDFGD
DVQTAVQSLILMGGDFNKAAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR000014PAS
IPR046347bZIP_sf
IPR035965PAS-like_dom_sf