prot_P-littoralis_Contig8.47.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.47.1
Unique Nameprot_P-littoralis_Contig8.47.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length42
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig8.47.1 vs. uniprot
Match: D8LB53_ECTSI (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB53_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.890e-10
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:    1 MAKGDMLAFHGGQPFSSPDDFRCHLSTTKTIGLPVASNAGA 41
            MAKGD+LAFHGGQPFSSPDDFR  L T K + + V S+AGA
Sbjct:  262 MAKGDLLAFHGGQPFSSPDDFRRQLRT-KAVDISVCSDAGA 301
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB53_ECTSI4.890e-1070.73Glutamine amidotransferase type-2 domain-containin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:232292..232417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.47.1mRNA_P-littoralis_Contig8.47.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 232292..232429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.47.1 ID=prot_P-littoralis_Contig8.47.1|Name=mRNA_P-littoralis_Contig8.47.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=42bp
MAKGDMLAFHGGQPFSSPDDFRCHLSTTKTIGLPVASNAGA*
back to top