prot_P-littoralis_Contig785.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig785.8.1
Unique Nameprot_P-littoralis_Contig785.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length722
Homology
BLAST of mRNA_P-littoralis_Contig785.8.1 vs. uniprot
Match: A0A6H5KIA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA5_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 8.170e-71
Identity = 135/231 (58.44%), Postives = 169/231 (73.16%), Query Frame = 0
Query:  185 VSHGANLRQKEFLFKVKQMKNRRNFRRVLGMLDEAERHRYGGATPKMYSCCIVYMGDGGNWEGALDILNRMFSSGKKPDAFCVNDGMNACKKAGKYERALWVFEQ------------VYNSAIALCARSKQRDKAAALLKEMLAKGLTPNVVTVSATIVATCGGVEGDWRGAVQILADARGSGGGDGGGSRMPGLGIRPSLGSHSIVLTACAKAGRWREALELLREMEEDD 403
            +SH  ++RQ +FLF VKQMKNRR+F  VL +L EAER   G ATPKMYSCCI YMG GGNWEGALD+L+RM + G KPDAFC+NDGMNACK+A KY++ALWVFEQ            VYNSAI LCARSKQ  +A  LLKEMLA+GL+P+VVT SA I A CGG   DWR A+QIL++ARGSGG   G +   G G++  +  ++ V++ CA AG W++ L L+++M E+D
Sbjct:  182 ISHDTSMRQGKFLFTVKQMKNRRDFGAVLKLLHEAERTGEG-ATPKMYSCCIGYMGKGGNWEGALDVLDRMHALGNKPDAFCINDGMNACKRARKYDKALWVFEQARDVWGAQLDSCVYNSAITLCARSKQGKRAVGLLKEMLAEGLSPDVVTFSAVISACCGGGGSDWRVAMQILSEARGSGGSSDG-ANTDGGGMKLDVVIYNTVMSLCADAGEWKQVLHLVKQMSEED 410          
BLAST of mRNA_P-littoralis_Contig785.8.1 vs. uniprot
Match: D7FKL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL0_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 9.450e-67
Identity = 120/178 (67.42%), Postives = 138/178 (77.53%), Query Frame = 0
Query:  191 LRQKEFLFKVKQMKNRRNFRRVLGMLDEAERHRYGGATPKMYSCCIVYMGDGGNWEGALDILNRMFSSGKKPDAFCVNDGMNACKKAGKYERALWVFEQ------------VYNSAIALCARSKQRDKAAALLKEMLAKGLTPNVVTVSATIVATCGGVEGDWRGAVQILADARGSGG 356
            +RQ +FLF VKQMKNRR+F  VL +L EAER R  GATPKMYSCCI YMG GGNWEGALD+L+RM + G KPDAFC+NDGMNACK+A KY++ALWVFEQ            VYNSAI LCARSKQ  +A  LLKEMLA+GL+P+VVT SA I A CGG   DWR A+QIL++ARGSGG
Sbjct:    1 MRQGKFLFTVKQMKNRRDFGAVLKLLHEAER-RGDGATPKMYSCCIGYMGKGGNWEGALDVLDRMHALGNKPDAFCINDGMNACKRARKYDKALWVFEQARDVWGAQLDGYVYNSAITLCARSKQGKRAVGLLKEMLAEGLSPDVVTFSAVISACCGGGGSDWRVAMQILSEARGSGG 177          
BLAST of mRNA_P-littoralis_Contig785.8.1 vs. uniprot
Match: D7FKL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL1_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.910e-15
Identity = 68/81 (83.95%), Postives = 72/81 (88.89%), Query Frame = 0
Query:  364 MPGLGIRPSLGSHSIVLTACAKAGRWREALELLREMEEDDDIKLDVVAYXXXXXXXXXXXXXXXXXXXXSKMPKVGVRPNV 444
            MPGLGIRPS+ S+SI LTACAK GRW+EAL LLREMEEDD+IKLDVV  XXXXXXXXXXXXXXXXXXXX  MP VGVRPNV
Sbjct:    1 MPGLGIRPSVESYSIGLTACAKGGRWQEALVLLREMEEDDEIKLDVVXXXXXXXXXXXXXXXXXXXXXXXDMPNVGVRPNV 81          
BLAST of mRNA_P-littoralis_Contig785.8.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 2.910e-6
Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 0
Query:  291 YNSAIALCARSKQRDKAAALLKEMLAKGLTPNVVTVSATIVATCGGVEGDWRGAVQILAD----ARGSGGGDGGGSRMPGLGIRPSLGSHSIVLTACAKAGRWREALELLREME 400
            +NSA+  CA + +  +  ALL  ML  G+ P+V +    +     G  G W+ AV++L +    A  +G G GG       G+ P LG ++ V++   +AGRW++AL+LLR ++
Sbjct:  355 FNSAMEACAIAGRWQEGTALLPRMLEVGVRPDVCSYGGHLACLRAG--GQWQRAVEVLDEMTKAAAKAGTGIGGSGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQ 466          
BLAST of mRNA_P-littoralis_Contig785.8.1 vs. uniprot
Match: A0A6H5KUL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL4_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 9.320e-6
Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 0
Query:  291 YNSAIALCARSKQRDKAAALLKEMLAKGLTPNVVTVSATIVATCGGVEGDWRGAVQILAD----ARGSGGGDGGGSRMPGLGIRPSLGSHSIVLTACAKAGRWREALELLREME 400
            +NSA+  CA + +  +  ALL  ML  G+ P+V +    +     G  G W+ AV++L +    A  +G G GG       G+ P LG ++ V++   +AGRW++AL+LLR ++
Sbjct:  605 FNSAMEACAIAGRWREGTALLPRMLEVGVRPDVCSYGGHLACLRAG--GQWQRAVEVLDEMTKAAAKAGTGIGGTGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQ 716          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig785.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KIA5_9PHAE8.170e-7158.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL0_ECTSI9.450e-6767.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FKL1_ECTSI1.910e-1583.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMP8_ECTSI2.910e-633.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUL4_9PHAE9.320e-633.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..186
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 205..593
coord: 434..704
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 395..456
e-value: 2.5E-13
score: 49.9
coord: 291..335
e-value: 0.0019
score: 18.3
coord: 538..598
e-value: 7.7E-9
score: 35.5
coord: 608..667
e-value: 2.2E-9
score: 37.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 271..289
e-value: 1.1
score: 9.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 477..524
e-value: 4.1E-10
score: 39.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 445..479
e-value: 2.8E-6
score: 25.1
coord: 290..323
e-value: 3.0E-5
score: 21.9
coord: 552..585
e-value: 2.0E-8
score: 31.9
coord: 658..687
e-value: 1.8E-4
score: 19.4
coord: 410..444
e-value: 1.3E-5
score: 23.1
coord: 375..408
e-value: 1.5E-6
score: 26.0
coord: 231..264
e-value: 8.9E-4
score: 17.3
coord: 622..656
e-value: 3.5E-5
score: 21.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 585..619
score: 9.262356
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 620..654
score: 11.345003
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 478..512
score: 10.939435
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 443..477
score: 11.038087
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 287..321
score: 9.689847
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 513..549
score: 9.898111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 550..584
score: 12.002681
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 408..442
score: 11.958836
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 372..402
score: 9.580234
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 655..689
score: 10.215989
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 180..289
e-value: 2.1E-10
score: 42.2
coord: 290..357
e-value: 7.2E-9
score: 37.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 611..710
e-value: 6.8E-25
score: 90.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 361..470
e-value: 3.6E-31
score: 110.7
coord: 492..610
e-value: 5.3E-31
score: 110.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig785contigP-littoralis_Contig785:58415..68585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig785.8.1mRNA_P-littoralis_Contig785.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig785 58196..68585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig785.8.1 ID=prot_P-littoralis_Contig785.8.1|Name=mRNA_P-littoralis_Contig785.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=722bp
MSIAFATAWVPSLLSSSNTCLWHGGNSPVSAAAAAATATTCATPFPALRA
AAGQQGDADRAAEESYYQRQAARRTFAEDVQASIREKQQREQQQQQQHKM
QQQQQQQQQDPSSSAASMRDVRRPNRTRLKTQQQRRGERAGTEEGSTTPL
SAATTGIRPPRSSGSQQHQPAATRGGGGGGTRFSVSHGANLRQKEFLFKV
KQMKNRRNFRRVLGMLDEAERHRYGGATPKMYSCCIVYMGDGGNWEGALD
ILNRMFSSGKKPDAFCVNDGMNACKKAGKYERALWVFEQVYNSAIALCAR
SKQRDKAAALLKEMLAKGLTPNVVTVSATIVATCGGVEGDWRGAVQILAD
ARGSGGGDGGGSRMPGLGIRPSLGSHSIVLTACAKAGRWREALELLREME
EDDDIKLDVVAYSAAITACANGGRWEEAVAILSKMPKVGVRPNVITCNAA
IKACGEAGEWKRALAILRGMPNAGLSPDAISYNSAIAALGIAGQNNQAQE
LLSDMARRGIEPTVVTYSSAINAISRSGGAQWRQAVALVKQMLAAGLAPD
NITYNSLIVACGKGGQWKQALSVLKGMKKRGVRCDIIGYSAAISACGEAG
QWEYSVGLLAEAKSLGIAPDLVAYTAAITACADAGRRDRATALLKEMLSA
GVRPDSATFTSLISALGHDGEWTKAVQILETMPKMGAPRNAVVYNALITS
WANAEKKRGEGGPLLLGGGGGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf