prot_P-littoralis_Contig78.89.32 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig78.89.32
Unique Nameprot_P-littoralis_Contig78.89.32
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length2298
Homology
BLAST of mRNA_P-littoralis_Contig78.89.32 vs. uniprot
Match: A0A6H5KIL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL3_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 3.160e-84
Identity = 270/585 (46.15%), Postives = 305/585 (52.14%), Query Frame = 0
Query: 1630 GRSPPNANKRPRRLSGIFPESVISKVPRLAIDLSTRLGCGVSTEQAKAACRELDRCGERLTCEQLVEACLGFFLISRDGCAASEEAERES-AAEMSLPPS--------STAPLDAAGPHGDGEKKALIPNSVIAKIPALLVDLETFMGHPVSMEETENRVRKLDRCGENLTQQELCDACVSLFLCCDNLGGGXXXXXXXXXXXSDDCVGGVGGGVACRVSSSPEGPRIDPRSTAVPTTANLLPDEGLSGWLPPLRLNGSDAGSGGRKEQGKGRGSRGGVGDRPSLEAAVGRRRQSGVGSRRGAASSSPPARAGVAWSNGSGGRXXXXXXXXXXXXXXXXXXXXXKKRG---RNAGAGAAATA----AVNGARKPRKKRASHXXXXXXXXXXXXXXAVSSIGSSSGKRKAAKDSK------LSKAHLECDVGEFVVFPTPQTSPVPFLLGKVLEKNLLTYEDTGGPARTEVTVHWYTPKKTTMATSTAKRAVRPGAASMSSAAAAAAEATLSVARYSAGGWSGVFVPA-----GEGGGTKRLRIDTGEEDLAAAMVVFPKLLHSNGGMPASVRETVTKAVVATAVA 2187
            G + P   KRPRR SGIFPESVISKVPRLA+DLS RLGCGV+TEQAKAACRELDRCG+RLT E+L +AC+G FLI       +E  E E  AA++  PP            P+    P     K A IP+SV AK+  L +DLETFMG PVS EE E  VRKL+ CGE+LTQQELCDACV   +C D   GGXXXXX          VGGV      R   SPEGPRID RS  +PT A ++P  GLS                                 R SL                                   GG XXX XXXXXXXXXXX      K  G   R  GA AAATA    AVNG        A+               +  S  S SG RK  + +K      LS   L CDVGEFVVFPTP++SPVPFLLGK+L K +L     G P+RTEVTVHWYTPK  T         V  G    +   A A EA   VARY++GGWSG FVP             RL+ DTGEEDLAAAMVVFP LL SN  MPA VR+ V  AV+A   A
Sbjct:  314 GSNSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTTEQAKAACRELDRCGDRLTSEELADACVGHFLIIPPAAQDTEGQEGEGHAAQLPSPPXXXXXXXPVQLPPVVGTSPS-QAVKPARIPDSVAAKVHRLALDLETFMGRPVSWEEAEAGVRKLENCGESLTQQELCDACVCHLVCGD---GGXXXXXASGVAE----VGGVR-----RRPWSPEGPRIDWRSH-IPTRAEVVPQGGLSDMF------------------------------RSSL-----------------------------------GGXXXXVXXXXXXXXXXXQACITSKGGGTKNRADGASAAATAWAARAVNGG-------ATRPPNNDKRAEQVDGRSKVSSSSGSGSRKKQRRNKVDGTTPLSSGRLNCDVGEFVVFPTPRSSPVPFLLGKILRKRVLASGKAGVPSRTEVTVHWYTPK--TRPPXXXXXXVARGNGDDAGTRAQALEAEA-VARYTSGGWSGDFVPTCGXXXXXXXXXXRLKSDTGEEDLAAAMVVFPGLLRSNDAMPAGVRDAVISAVLAARAA 809          
BLAST of mRNA_P-littoralis_Contig78.89.32 vs. uniprot
Match: D8LT08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT08_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 1.000e-77
Identity = 346/900 (38.44%), Postives = 390/900 (43.33%), Query Frame = 0
Query: 1316 RRASKR-VRQPCGLIPESVVAKVPRLLMDLEASLGYRVFADDAKARCRELRRCGEGLSQEGLCDALVSLLLRQPPFHNXXXXXXXXXXXXXXXXXXSDSGSASGVXXXXXXXXXXGPVVGRGEKKEGPIGTRLLPRSAPLDGTGLMRPMAVERGCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAGGDDADXXXXXXXXXXXXXXXXXXXGRSPPNANKRPRRLSGIFPESVISKVPRLAIDLSTRLGCGVSTEQAKAACRELDRCGERLTCEQLVEACLGFFLISRDGCAASEEAERES-AAEMSLPPSS------------TAPLDAAGPHGDGEKKALIPNSVIAKIPALLVDLETFMGHPVSMEETENRVRKLDRCGENLTQQELCDACVSLFLCCDNLGGGXXXXXXXXXXXSDDCVGGVGGGVACRVSSSPEGPRIDPRSTAVPTTANLLPDEGLSGWLPPLRLNGSDAGSGGRKEQGKGRGSRGGVGDRPSLEAAVGRRRQSGVGSRRGAASSSPPARAGVAWSNGSGGRXXXXXXXXXXXXXXXXXXXXXKKRGRNAGAGAAATAAVNGARKP--RKKRASHXXXXXXXXXXXXXXAVSSIGSSSGKRKAAKDSK------LSKAHLECDVGEFVVFPTPQTSPVPFLLGKVLEKNLLTYEDTGGPARTEVTVHWYTPKKTTMATSTAKRAVRPGAASMSSAAAAAAEATLSVARYSAGGWSGVFVPAG----EGGGTKRLRIDTGEEDLAAAMVVFPKLLHSNGGMPASVRETVTKAVVATAVASE 2189
            R  SKR  RQPCGLIPESV+AKVPRLLMDLE  +GYRVFADDAKARCREL RCGEGL+Q+ LCDALVSLL  Q P                     +D+GS                                        G+G          C G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                XXXXXXXX        G AG   A                      + P   KRPRR SGIFPESVISKVPRLA+DLS RLGCGV+TEQAKAACRELDRCG+RLT ++L +AC+G FLI+      +E+ E E  AA++ LPPSS            T+P  A  P G       IP+SV AK+  L +DLETFMG PVS+EE E  VRKL+ CG  +T +                GGG                                  R D  S A                                                                                AW                                       AA A   G+R+P  + KRA H                   GS SG RK  + +K      LS   L CDVGEFVVFPTP+TSPVPFLLGKVL K  L     G P+RTEVTVHWYTPK  T         V  G    +   A A EA   V RY+ GGWSG FVPAG      G T+RL+ DTGEEDLA+AMVVFP LL SN  +PA VR+ V  AV+A   A +
Sbjct:   88 RGLSKRGARQPCGLIPESVIAKVPRLLMDLEKFVGYRVFADDAKARCRELDRCGEGLNQQELCDALVSLLRLQAP--------------------SNDAGSG---------------------------------------GSGAA--------CYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHQRQEANGTAPLNAGAAKSRSSRAGSVAGGGSVSGEGRGAETKSGAGKRTTGPADDENETNKRXXXXXXXXGNHRVLLRGGAGASAA---------------GAAVGSTNSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTTEQAKAACRELDRCGDRLTSKELADACVGHFLITPPAAQHTEDQEGEGHAAQLPLPPSSPPAPTPLPPVVGTSPSQAVKPAG-------IPDSVAAKVNRLALDLETFMGRPVSLEEAEAGVRKLENCG--ITSK----------------GGGTKN-------------------------------RADAASAAA------------------------------------------------------------------------------TAW---------------------------------------AARAVNRGSRRPPNKDKRAEHDDGGRRISGGS--------GSGSGSRKKQRCNKVDGTTPLSSGRLNCDVGEFVVFPTPRTSPVPFLLGKVLRKRALASGKAGVPSRTEVTVHWYTPK--TRPPXXXXXXVARGNGDDAGTRARALEAEA-VVRYTLGGWSGDFVPAGGXXXXXGATRRLKSDTGEEDLASAMVVFPGLLRSNDAIPAGVRDAVISAVLAATAAED 721          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.89.32 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIL3_9PHAE3.160e-8446.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT08_ECTSI1.000e-7738.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2187..2216
NoneNo IPR availableCOILSCoilCoilcoord: 1773..1793
NoneNo IPR availableCOILSCoilCoilcoord: 1478..1511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1519..1535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1569..1606
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 811..832
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1487..1512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..612
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..673
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 693..719
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1214..1324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2214..2232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1138..1157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1715..1740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..832
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1406..1643
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..673
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1138..1172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2188..2297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2281..2297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 950..1035
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 958..979
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1938..1965
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1838..2025
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1997..2019
NoneNo IPR availablePANTHERPTHR23216NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1coord: 490..1588
NoneNo IPR availablePANTHERPTHR23216:SF1NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1coord: 490..1588

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:376325..388524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.89.32mRNA_P-littoralis_Contig78.89.32Pylaiella littoralis U1_48mRNAP-littoralis_Contig78 376134..390220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig78.89.32 ID=prot_P-littoralis_Contig78.89.32|Name=mRNA_P-littoralis_Contig78.89.32|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2298bp
MPHDPAIVTPPQQQQHQQHEARKEHEDHHPPPPPPPAAAAPPAETLAQFQ
GDRAGCARATASDEGNDGVGQVVEVVVGQLQRTTMAPPVQGVVLAPVVEA
TTTAVVPAVFIGHHHYHQQQLSRAPHEGGGCAEQPQQSSTVGGLPALPTP
SADTDIAHTTCGTTSAIAATVGGDGGPRRGSGACTAAAVSNSGVCDYISS
SSAYFPAVAPAATAAVSSTNPDTDQPAEIGPGATKACAGAAATPSLLYAT
TAVQGGVLTPPALSTSLHCASPLPQSQAAPPEHHDPTTPALDTAGAGTAV
PFPSPPSLSPADKVESPVPTAPWLVERARSVKAAVEEAVRGVVPINSGGR
AGVSRVDEDRDAAGASGWVAPGEGERKQGGRERDAMEFPDEVAAKVPRLV
ADLHASLGRGVSTSEAKAWVLALDRLGEGLDREKLLEACLDVSRDVLRPD
ASLAPSSNPVAGVPATTEAATLQGVPETEVATLQQSRSSSPAVPSGAATV
AASGARKGAMVTAAAAAMAASLLRDAVRPEDASIPSCSSEAGGIGTPASK
LTWPPPTAALKTSPVLPAPAAPSPAAGGEHAAAAAAAAGVDVSRDPPPSL
NSSSSASPAVVQATAGTAVERGEAAREEDVSGTLWPPENDPGGYSPPATL
KPPGKQPTTATPPPPPPLPCALLTPSPAGAVLASAAPPSTGVPVASAPAV
EGGAASEEDHISRGSSWPDVSSSSAAVEVLATTAPAPAPTEVVEGGDFFY
DQEGEMEEEEEVKEVEVEELRAAAMLEASAASSSGAAPDAEMTVAGEVRA
PGYVGGHTAGSSRDRDTSVGTHSPTTASETNQGDAAVAATAAAAAAAAAA
TATATAAAATCNGAAVDCVVGGSTLCSDGPNISNGGGSSGGGGAATLGGV
VVGNVASSPVRRRKVVQRHPIGESHSTCGSGGEVSQAWVPTVTVAASATA
VAGEREATDSDATTTTPGGSASTASTHFGGGTPAMAAATQTLVSEEAEGE
GSDALVASPAGSSGGSGGGGGSGAGGAGGRRGARRNASKFPDDVIAKVPC
LSADLNAAVGRYVSLQEVKDIVRSLRRCGAGMDRQALLGGCLELMDKSRN
SAPARLSSSNGEVTSSAPASAPASAAAAAAVATSSPPQNRLFLSGTGGST
SSGDSARTIPTERRRRCNDAATTATINAASSASSCSPSAAEALAPTAPAV
PAAPAAAAAVAADKPHARVIGRPPKRKRGRPKKNELGQYYSSGGSAAGAG
AEGENDGVGGGGGREVAAVAGAESPTSKEVKVTEAAAMGDGAVRRRRSDG
GRGGSGGGGGAPTPPRRASKRVRQPCGLIPESVVAKVPRLLMDLEASLGY
RVFADDAKARCRELRRCGEGLSQEGLCDALVSLLLRQPPFHNDAAACNGG
GDVGGGGGGGSDSGSASGVGGGGSQESESGPVVGRGEKKEGPIGTRLLPR
SAPLDGTGLMRPMAVERGCGGGDSGGERKTNSSDKQQEEEEEEEEEEQED
EEEQEEEEELLITDAANSAPLAPPPPQPQPQPPPGQQHASAVAVTNPGGG
EVSPATAAAAAVSAVVKGNKTENHERKKAKTTAGEKETSKEGGEGGAAKR
KGSAGGDDADAAAAAAGAGAGADAARRRRGRSPPNANKRPRRLSGIFPES
VISKVPRLAIDLSTRLGCGVSTEQAKAACRELDRCGERLTCEQLVEACLG
FFLISRDGCAASEEAERESAAEMSLPPSSTAPLDAAGPHGDGEKKALIPN
SVIAKIPALLVDLETFMGHPVSMEETENRVRKLDRCGENLTQQELCDACV
SLFLCCDNLGGGAGGGGVGTGGGSDDCVGGVGGGVACRVSSSPEGPRIDP
RSTAVPTTANLLPDEGLSGWLPPLRLNGSDAGSGGRKEQGKGRGSRGGVG
DRPSLEAAVGRRRQSGVGSRRGAASSSPPARAGVAWSNGSGGRSSSSGSS
GSSRNGKSSPNGSGKKRGRNAGAGAAATAAVNGARKPRKKRASHGGSKSK
SNSNNNNNAVSSIGSSSGKRKAAKDSKLSKAHLECDVGEFVVFPTPQTSP
VPFLLGKVLEKNLLTYEDTGGPARTEVTVHWYTPKKTTMATSTAKRAVRP
GAASMSSAAAAAAEATLSVARYSAGGWSGVFVPAGEGGGTKRLRIDTGEE
DLAAAMVVFPKLLHSNGGMPASVRETVTKAVVATAVASEQRKERQRKQEK
QTKQQQQQQQQQQRRKNDPKEATDEKKKAGEDNLGAAAAAAVPAATPPTI
GRGLGVARGDDDTAATAAAAVAAAAVAARKKGGEEGWKTDDSADDFM*
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